RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 VWDEQ8N2E2 1590 aa12.45□□□□□ -0.42
CD46-202ENST00000322918 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
CD46-202ENST00000322918 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
CD46-202ENST00000322918 CEBPAP49715 358 aaPredicted RBP12.44□□□□□ -0.42
CD46-202ENST00000322918 TRPM1Q7Z4N2 1603 aa12.44□□□□□ -0.42
CD46-202ENST00000322918 GLI2P10070 1586 aa12.44□□□□□ -0.42
CD46-202ENST00000322918 TMC1Q8TDI8 760 aa12.43□□□□□ -0.42
CD46-202ENST00000322918 RNF17Q9BXT8 1623 aaKnown RBP12.43□□□□□ -0.42
CD46-202ENST00000322918 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
CD46-202ENST00000322918 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
CD46-202ENST00000322918 VGFO15240 615 aaPredicted RBP12.39□□□□□ -0.43
CD46-202ENST00000322918 MROH2AA6NES4 1674 aa12.39□□□□□ -0.43
CD46-202ENST00000322918 KIF13AQ9H1H9 1805 aa12.39□□□□□ -0.43
CD46-202ENST00000322918 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
CD46-202ENST00000322918 TNNT2P45379 298 aaPredicted RBP12.38□□□□□ -0.43
CD46-202ENST00000322918 SLC52A1Q9NWF4 448 aa12.38□□□□□ -0.43
CD46-202ENST00000322918 KIF1BO60333 1816 aa12.37□□□□□ -0.43
CD46-202ENST00000322918 CAMSAP1Q5T5Y3 1602 aa12.37□□□□□ -0.43
CD46-202ENST00000322918 IRX6P78412 446 aaPredicted RBP12.37□□□□□ -0.43
CD46-202ENST00000322918 KNSTRNQ9Y448 316 aa12.37□□□□□ -0.43
CD46-202ENST00000322918 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
CD46-202ENST00000322918 LMTK2Q8IWU2 1503 aa12.37□□□□□ -0.43
CD46-202ENST00000322918 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
CD46-202ENST00000322918 C14orf93Q9H972 538 aaKnown RBP12.36□□□□□ -0.43
CD46-202ENST00000322918 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
CD46-202ENST00000322918 MINK1Q8N4C8 1332 aaPredicted RBP12.35□□□□□ -0.43
CD46-202ENST00000322918 SYNMO15061 1565 aa12.35□□□□□ -0.43
CD46-202ENST00000322918 EIF3AQ14152 1382 aaKnown RBP12.34□□□□□ -0.43
CD46-202ENST00000322918 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
CD46-202ENST00000322918 STAC3Q96MF2 364 aa12.34□□□□□ -0.43
CD46-202ENST00000322918 POGKQ9P215 609 aa12.34□□□□□ -0.43
CD46-202ENST00000322918 SLC12A5Q9H2X9 1139 aa12.34□□□□□ -0.43
CD46-202ENST00000322918 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
CD46-202ENST00000322918 ZMYM3Q14202 1370 aa12.34□□□□□ -0.43
CD46-202ENST00000322918 KTN1Q86UP2 1357 aaKnown RBP12.34□□□□□ -0.43
CD46-202ENST00000322918 FKBP8Q14318 412 aa12.33□□□□□ -0.44
CD46-202ENST00000322918 SUPT16HQ9Y5B9 1047 aaKnown RBP12.33□□□□□ -0.44
CD46-202ENST00000322918 ADGRB3O60242 1522 aa12.32□□□□□ -0.44
CD46-202ENST00000322918 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
CD46-202ENST00000322918 TSHZ2Q9NRE2 1034 aa12.32□□□□□ -0.44
CD46-202ENST00000322918 ZMYM4Q5VZL5 1548 aa12.32□□□□□ -0.44
CD46-202ENST00000322918 CDCA8Q53HL2 280 aa12.32□□□□□ -0.44
CD46-202ENST00000322918 PRAM1Q96QH2 718 aa12.32□□□□□ -0.44
CD46-202ENST00000322918 RPGRIP1LQ68CZ1 1315 aa12.31□□□□□ -0.44
CD46-202ENST00000322918 CLTCQ00610 1675 aaKnown RBP12.31□□□□□ -0.44
CD46-202ENST00000322918 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
CD46-202ENST00000322918 MYBBP1AQ9BQG0 1328 aaKnown RBP12.31□□□□□ -0.44
CD46-202ENST00000322918 PIK3C2GO75747 1445 aa12.3□□□□□ -0.44
CD46-202ENST00000322918 ERVK-7P63135 1459 aa12.29□□□□□ -0.44
CD46-202ENST00000322918 RALBP1Q15311 655 aa12.29□□□□□ -0.44
CD46-202ENST00000322918 MYOM2P54296 1465 aa12.29□□□□□ -0.44
CD46-202ENST00000322918 NUTM2FA1L443 756 aa12.29□□□□□ -0.44
CD46-202ENST00000322918 ARHGAP31Q2M1Z3 1444 aa12.29□□□□□ -0.44
CD46-202ENST00000322918 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
CD46-202ENST00000322918 PNISRQ8TF01 805 aaKnown RBP12.28□□□□□ -0.44
CD46-202ENST00000322918 CARD14Q9BXL6 1004 aa12.28□□□□□ -0.44
CD46-202ENST00000322918 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.44
CD46-202ENST00000322918 NLRP13Q86W25 1043 aa12.27□□□□□ -0.44
CD46-202ENST00000322918 SLC26A8Q96RN1 970 aa12.27□□□□□ -0.44
CD46-202ENST00000322918 NEFLP07196 543 aa12.27□□□□□ -0.45
CD46-202ENST00000322918 MYO5BQ9ULV0 1848 aa12.27□□□□□ -0.45
CD46-202ENST00000322918 PREX1Q8TCU6 1659 aa12.26□□□□□ -0.45
CD46-202ENST00000322918 PIK3C2BO00750 1634 aa12.26□□□□□ -0.45
CD46-202ENST00000322918 ARHGEF40Q8TER5 1519 aa12.26□□□□□ -0.45
CD46-202ENST00000322918 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
CD46-202ENST00000322918 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
CD46-202ENST00000322918 AMER1Q5JTC6 1135 aaPredicted RBP12.24□□□□□ -0.45
CD46-202ENST00000322918 IQGAP1P46940 1657 aa12.24□□□□□ -0.45
CD46-202ENST00000322918 RIMS2Q9UQ26 1411 aa12.24□□□□□ -0.45
CD46-202ENST00000322918 TNRQ92752 1358 aa12.24□□□□□ -0.45
CD46-202ENST00000322918 PPLO60437 1756 aa12.24□□□□□ -0.45
CD46-202ENST00000322918 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
CD46-202ENST00000322918 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
CD46-202ENST00000322918 NRXN1Q9ULB1 1477 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 CCDC146Q8IYE0 955 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 LAMC1P11047 1609 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 PARD3Q8TEW0 1356 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 LTKP29376 864 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 AGLP35573 1532 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 ZC3H13Q5T200 1668 aaKnown RBP12.22□□□□□ -0.45
CD46-202ENST00000322918 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
CD46-202ENST00000322918 NCKAP5LQ9HCH0 1330 aa12.21□□□□□ -0.45
CD46-202ENST00000322918 IFT172Q9UG01 1749 aa12.21□□□□□ -0.45
CD46-202ENST00000322918 TMEM131LA2VDJ0 1609 aa12.21□□□□□ -0.45
CD46-202ENST00000322918 MORC1Q86VD1 984 aa12.21□□□□□ -0.45
CD46-202ENST00000322918 ADAMTS8Q9UP79 889 aa12.21□□□□□ -0.45
CD46-202ENST00000322918 PLEKHH1Q9ULM0 1364 aa12.21□□□□□ -0.46
CD46-202ENST00000322918 WDR43Q15061 677 aaKnown RBP eCLIP12.21□□□□□ -0.46
CD46-202ENST00000322918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.2□□□□□ -0.461e-6■■■□□ 18.3
CD46-202ENST00000322918 CDK19Q9BWU1 502 aa12.2□□□□□ -0.46
CD46-202ENST00000322918 BRD4O60885 1362 aaPredicted RBP12.2□□□□□ -0.46
CD46-202ENST00000322918 ADGRB1O14514 1584 aa12.2□□□□□ -0.46
CD46-202ENST00000322918 RBM33Q96EV2 1170 aaKnown RBP12.2□□□□□ -0.46
CD46-202ENST00000322918 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
CD46-202ENST00000322918 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
CD46-202ENST00000322918 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
CD46-202ENST00000322918 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
CD46-202ENST00000322918 ZBED9Q6R2W3 1325 aa12.19□□□□□ -0.46
CD46-202ENST00000322918 METP08581 1390 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms