RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 PMFBP1Q8TBY8 1022 aa14.06□□□□□ -0.16
TOP3A-201ENST00000321105 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
TOP3A-201ENST00000321105 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
TOP3A-201ENST00000321105 ERBINQ96RT1 1412 aa14.06□□□□□ -0.16
TOP3A-201ENST00000321105 RIPK4P57078 832 aa14.06□□□□□ -0.16
TOP3A-201ENST00000321105 CEBPAP49715 358 aaPredicted RBP14.05□□□□□ -0.16
TOP3A-201ENST00000321105 CD109Q6YHK3 1445 aa14.05□□□□□ -0.16
TOP3A-201ENST00000321105 ADAMTS12P58397 1594 aa14.04□□□□□ -0.16
TOP3A-201ENST00000321105 COG3Q96JB2 828 aa14.04□□□□□ -0.16
TOP3A-201ENST00000321105 TSR2Q969E8 191 aaKnown RBP14.04□□□□□ -0.16
TOP3A-201ENST00000321105 BRD4O60885 1362 aaPredicted RBP14.04□□□□□ -0.16
TOP3A-201ENST00000321105 PNNQ9H307 717 aaKnown RBP14.03□□□□□ -0.16
TOP3A-201ENST00000321105 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
TOP3A-201ENST00000321105 DIAPH1O60610 1272 aaKnown RBP14.03□□□□□ -0.16
TOP3A-201ENST00000321105 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
TOP3A-201ENST00000321105 E9PSI1 815 aa14.03□□□□□ -0.16
TOP3A-201ENST00000321105 PDE4AP27815 886 aa14.03□□□□□ -0.16
TOP3A-201ENST00000321105 DISP3Q9P2K9 1392 aa14.02□□□□□ -0.16
TOP3A-201ENST00000321105 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.16
TOP3A-201ENST00000321105 EIF4G3O43432 1585 aaKnown RBP14.02□□□□□ -0.17
TOP3A-201ENST00000321105 KIF14Q15058 1648 aa14.02□□□□□ -0.17
TOP3A-201ENST00000321105 ADGRL1O94910 1474 aa14.02□□□□□ -0.17
TOP3A-201ENST00000321105 CTTNBP2Q8WZ74 1663 aa14.01□□□□□ -0.17
TOP3A-201ENST00000321105 DDRGK1Q96HY6 314 aa14.01□□□□□ -0.17
TOP3A-201ENST00000321105 TAOK2Q9UL54 1235 aa14.01□□□□□ -0.17
TOP3A-201ENST00000321105 WDR62O43379 1518 aa14.01□□□□□ -0.17
TOP3A-201ENST00000321105 ZNF330Q9Y3S2 320 aaPredicted RBP14.01□□□□□ -0.17
TOP3A-201ENST00000321105 C20orf194Q5TEA3 1177 aa14□□□□□ -0.17
TOP3A-201ENST00000321105 CDK19Q9BWU1 502 aa14□□□□□ -0.17
TOP3A-201ENST00000321105 BECN1Q14457 450 aa14□□□□□ -0.17
TOP3A-201ENST00000321105 ZNF428Q96B54 188 aa14□□□□□ -0.17
TOP3A-201ENST00000321105 KIAA0556O60303 1618 aa14□□□□□ -0.17
TOP3A-201ENST00000321105 CSB-PGBD3P0DP91 1061 aa14□□□□□ -0.17
TOP3A-201ENST00000321105 MFAP1P55081 439 aaKnown RBP14□□□□□ -0.17
TOP3A-201ENST00000321105 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
TOP3A-201ENST00000321105 FANCAO15360 1455 aa13.99□□□□□ -0.17
TOP3A-201ENST00000321105 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
TOP3A-201ENST00000321105 RRS1Q15050 365 aaKnown RBP13.98□□□□□ -0.17
TOP3A-201ENST00000321105 SYCP2Q9BX26 1530 aa13.98□□□□□ -0.17
TOP3A-201ENST00000321105 OS9Q13438 667 aaPredicted RBP13.98□□□□□ -0.17
TOP3A-201ENST00000321105 THUMPD2Q9BTF0 503 aaKnown RBP13.97□□□□□ -0.17
TOP3A-201ENST00000321105 RWDD1Q9H446 243 aaPredicted RBP13.97□□□□□ -0.17
TOP3A-201ENST00000321105 ABCA5Q8WWZ7 1642 aa13.97□□□□□ -0.17
TOP3A-201ENST00000321105 PRKAR2BP31323 418 aa13.96□□□□□ -0.17
TOP3A-201ENST00000321105 MS4A1P11836 297 aa13.96□□□□□ -0.18
TOP3A-201ENST00000321105 IPO9Q96P70 1041 aaKnown RBP13.95□□□□□ -0.18
TOP3A-201ENST00000321105 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
TOP3A-201ENST00000321105 NCLP19338 710 aaKnown RBP13.95□□□□□ -0.18
TOP3A-201ENST00000321105 STAC3Q96MF2 364 aa13.95□□□□□ -0.18
TOP3A-201ENST00000321105 SLC52A1Q9NWF4 448 aa13.95□□□□□ -0.18
TOP3A-201ENST00000321105 EXOSC9Q06265 439 aaKnown RBP13.94□□□□□ -0.18
TOP3A-201ENST00000321105 NLRP6P59044 892 aa13.94□□□□□ -0.18
TOP3A-201ENST00000321105 ZKSCAN2Q63HK3 967 aa13.94□□□□□ -0.18
TOP3A-201ENST00000321105 XPCQ01831 940 aaPredicted RBP13.93□□□□□ -0.18
TOP3A-201ENST00000321105 TESK2Q96S53 571 aa13.93□□□□□ -0.18
TOP3A-201ENST00000321105 EIF2S2P20042 333 aaKnown RBP13.93□□□□□ -0.18
TOP3A-201ENST00000321105 NUP160Q12769 1436 aa13.92□□□□□ -0.18
TOP3A-201ENST00000321105 CFAP43Q8NDM7 1665 aa13.92□□□□□ -0.18
TOP3A-201ENST00000321105 TARBP1Q13395 1621 aaKnown RBP13.92□□□□□ -0.18
TOP3A-201ENST00000321105 ASXL2Q76L83 1435 aa13.92□□□□□ -0.18
TOP3A-201ENST00000321105 EIF5BO60841 1220 aaKnown RBP13.92□□□□□ -0.18
TOP3A-201ENST00000321105 PLCH2O75038 1416 aa13.92□□□□□ -0.18
TOP3A-201ENST00000321105 NOS1P29475 1434 aa13.92□□□□□ -0.18
TOP3A-201ENST00000321105 PZPP20742 1482 aa13.92□□□□□ -0.18
TOP3A-201ENST00000321105 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
TOP3A-201ENST00000321105 NGEFQ8N5V2 710 aa13.91□□□□□ -0.18
TOP3A-201ENST00000321105 NSD3Q9BZ95 1437 aa13.91□□□□□ -0.18
TOP3A-201ENST00000321105 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
TOP3A-201ENST00000321105 TCOF1Q13428 1488 aaKnown RBP13.91□□□□□ -0.18
TOP3A-201ENST00000321105 CENPQQ7L2Z9 268 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-201ENST00000321105 GZF1Q9H116 711 aaPredicted RBP13.9□□□□□ -0.18
TOP3A-201ENST00000321105 C1orf115Q9H7X2 142 aa13.9□□□□□ -0.18
TOP3A-201ENST00000321105 DZIP1LQ8IYY4 767 aaKnown RBP13.9□□□□□ -0.18
TOP3A-201ENST00000321105 STK31Q9BXU1 1019 aa13.9□□□□□ -0.18
TOP3A-201ENST00000321105 LNPKQ9C0E8 428 aa13.9□□□□□ -0.18
TOP3A-201ENST00000321105 HSP90AB1P08238 724 aaKnown RBP13.9□□□□□ -0.19
TOP3A-201ENST00000321105 PSME1Q06323 249 aa13.9□□□□□ -0.19
TOP3A-201ENST00000321105 KDM6BO15054 1643 aa13.89□□□□□ -0.19
TOP3A-201ENST00000321105 DCTN1Q14203 1278 aa13.89□□□□□ -0.19
TOP3A-201ENST00000321105 DHX29Q7Z478 1369 aaKnown RBP13.89□□□□□ -0.19
TOP3A-201ENST00000321105 CEP170Q5SW79 1584 aa13.89□□□□□ -0.19
TOP3A-201ENST00000321105 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
TOP3A-201ENST00000321105 CALD1Q05682 793 aaKnown RBP13.88□□□□□ -0.19
TOP3A-201ENST00000321105 NOL8Q76FK4 1167 aaKnown RBP13.88□□□□□ -0.19
TOP3A-201ENST00000321105 NME9Q86XW9 330 aa13.88□□□□□ -0.19
TOP3A-201ENST00000321105 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
TOP3A-201ENST00000321105 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
TOP3A-201ENST00000321105 SAMD9Q5K651 1589 aa13.87□□□□□ -0.19
TOP3A-201ENST00000321105 EMILIN1Q9Y6C2 1016 aa13.87□□□□□ -0.19
TOP3A-201ENST00000321105 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
TOP3A-201ENST00000321105 ABTB2Q8N961 1025 aa13.86□□□□□ -0.19
TOP3A-201ENST00000321105 MIS18AQ9NYP9 233 aa13.86□□□□□ -0.19
TOP3A-201ENST00000321105 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.86□□□□□ -0.19
TOP3A-201ENST00000321105 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
TOP3A-201ENST00000321105 AMER1Q5JTC6 1135 aaPredicted RBP13.85□□□□□ -0.19
TOP3A-201ENST00000321105 FAM135AQ9P2D6 1515 aa13.85□□□□□ -0.19
TOP3A-201ENST00000321105 FAM161AQ3B820 660 aa13.85□□□□□ -0.19
TOP3A-201ENST00000321105 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
TOP3A-201ENST00000321105 CARD14Q9BXL6 1004 aa13.85□□□□□ -0.19
TOP3A-201ENST00000321105 CFAP65Q6ZU64 1925 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms