RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 CGNL1Q0VF96 1302 aa19.39■□□□□ 0.69
GCFC2-201ENST00000321027 ELL2O00472 640 aaPredicted RBP19.39■□□□□ 0.69
GCFC2-201ENST00000321027 EID1Q9Y6B2 187 aa19.38■□□□□ 0.69
GCFC2-201ENST00000321027 MAPKBP1O60336 1514 aa19.38■□□□□ 0.69
GCFC2-201ENST00000321027 NAP1L2Q9ULW6 460 aaPredicted RBP19.37■□□□□ 0.69
GCFC2-201ENST00000321027 PANK1Q8TE04 598 aa19.36■□□□□ 0.69
GCFC2-201ENST00000321027 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
GCFC2-201ENST00000321027 CAMSAP2Q08AD1 1489 aa19.35■□□□□ 0.69
GCFC2-201ENST00000321027 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
GCFC2-201ENST00000321027 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
GCFC2-201ENST00000321027 RTF1Q92541 710 aaKnown RBP19.33■□□□□ 0.69
GCFC2-201ENST00000321027 RAPGEF3O95398 923 aa19.33■□□□□ 0.68
GCFC2-201ENST00000321027 NFKBIBQ15653 356 aa19.33■□□□□ 0.68
GCFC2-201ENST00000321027 PTPRKQ15262 1439 aa19.33■□□□□ 0.68
GCFC2-201ENST00000321027 GOLGA6L3A6NEY3 463 aa19.33■□□□□ 0.68
GCFC2-201ENST00000321027 PPP2R1AP30153 589 aa19.33■□□□□ 0.68
GCFC2-201ENST00000321027 NCOA1Q15788 1441 aa19.32■□□□□ 0.68
GCFC2-201ENST00000321027 SKAP1Q86WV1 359 aa19.32■□□□□ 0.68
GCFC2-201ENST00000321027 NGDNQ8NEJ9 315 aaKnown RBP19.32■□□□□ 0.68
GCFC2-201ENST00000321027 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
GCFC2-201ENST00000321027 GBP4Q96PP9 640 aa19.32■□□□□ 0.68
GCFC2-201ENST00000321027 GOLGA6L4A6NEF3 574 aa19.31■□□□□ 0.68
GCFC2-201ENST00000321027 BACH2Q9BYV9 841 aa19.31■□□□□ 0.68
GCFC2-201ENST00000321027 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
GCFC2-201ENST00000321027 CCDC141Q6ZP82 1450 aa19.28■□□□□ 0.68
GCFC2-201ENST00000321027 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
GCFC2-201ENST00000321027 BCAR3O75815 825 aa19.27■□□□□ 0.68
GCFC2-201ENST00000321027 TULP1O00294 542 aaPredicted RBP19.26■□□□□ 0.67
GCFC2-201ENST00000321027 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
GCFC2-201ENST00000321027 CABP2Q9NPB3 220 aa19.25■□□□□ 0.67
GCFC2-201ENST00000321027 MSNP26038 577 aaKnown RBP19.24■□□□□ 0.67
GCFC2-201ENST00000321027 SLC4A10Q6U841 1118 aa19.24■□□□□ 0.67
GCFC2-201ENST00000321027 DZIP1LQ8IYY4 767 aaKnown RBP19.24■□□□□ 0.67
GCFC2-201ENST00000321027 RUNDC1Q96C34 613 aa19.24■□□□□ 0.67
GCFC2-201ENST00000321027 TCP11L2Q8N4U5 519 aa19.23■□□□□ 0.67
GCFC2-201ENST00000321027 MTHFSP49914 203 aa19.22■□□□□ 0.67
GCFC2-201ENST00000321027 GGNBP2Q9H3C7 697 aa19.22■□□□□ 0.67
GCFC2-201ENST00000321027 GPATCH8Q9UKJ3 1502 aaKnown RBP19.22■□□□□ 0.67
GCFC2-201ENST00000321027 MCCP23508 829 aa19.22■□□□□ 0.67
GCFC2-201ENST00000321027 AMPHP49418 695 aa19.22■□□□□ 0.67
GCFC2-201ENST00000321027 LTV1Q96GA3 475 aaPredicted RBP19.21■□□□□ 0.67
GCFC2-201ENST00000321027 IL27Q8NEV9 243 aa19.21■□□□□ 0.67
GCFC2-201ENST00000321027 COG3Q96JB2 828 aa19.21■□□□□ 0.67
GCFC2-201ENST00000321027 FRAT2O75474 233 aaPredicted RBP19.2■□□□□ 0.66
GCFC2-201ENST00000321027 NUP153P49790 1475 aaKnown RBP19.2■□□□□ 0.66
GCFC2-201ENST00000321027 RIPK4P57078 832 aa19.2■□□□□ 0.66
GCFC2-201ENST00000321027 NOL8Q76FK4 1167 aaKnown RBP19.2■□□□□ 0.66
GCFC2-201ENST00000321027 NGEFQ8N5V2 710 aa19.2■□□□□ 0.66
GCFC2-201ENST00000321027 KIF14Q15058 1648 aa19.19■□□□□ 0.66
GCFC2-201ENST00000321027 C20orf194Q5TEA3 1177 aa19.19■□□□□ 0.66
GCFC2-201ENST00000321027 SLC12A5Q9H2X9 1139 aa19.19■□□□□ 0.66
GCFC2-201ENST00000321027 LNPKQ9C0E8 428 aa19.18■□□□□ 0.66
GCFC2-201ENST00000321027 BRPF3Q9ULD4 1205 aa19.18■□□□□ 0.66
GCFC2-201ENST00000321027 UGGT2Q9NYU1 1516 aa19.18■□□□□ 0.66
GCFC2-201ENST00000321027 FOXD4L5Q5VV16 416 aaPredicted RBP19.17■□□□□ 0.66
GCFC2-201ENST00000321027 FOXD4L4Q8WXT5 416 aaPredicted RBP19.17■□□□□ 0.66
GCFC2-201ENST00000321027 DDX19BQ9UMR2 479 aa19.17■□□□□ 0.66
GCFC2-201ENST00000321027 ATP10BO94823 1461 aa19.17■□□□□ 0.66
GCFC2-201ENST00000321027 DIAPH1O60610 1272 aaKnown RBP19.16■□□□□ 0.66
GCFC2-201ENST00000321027 CFAP44Q96MT7 982 aa19.16■□□□□ 0.66
GCFC2-201ENST00000321027 RPRD2Q5VT52 1461 aaKnown RBP19.16■□□□□ 0.66
GCFC2-201ENST00000321027 NPHP1O15259 732 aa19.16■□□□□ 0.66
GCFC2-201ENST00000321027 NRDCO43847 1150 aa19.16■□□□□ 0.66
GCFC2-201ENST00000321027 KIAA1211Q6ZU35 1233 aa19.15■□□□□ 0.66
GCFC2-201ENST00000321027 TRIM6-TRIM34B2RNG4 842 aa19.14■□□□□ 0.66
GCFC2-201ENST00000321027 LMOD3Q0VAK6 560 aa19.14■□□□□ 0.65
GCFC2-201ENST00000321027 DRC7Q8IY82 874 aa19.13■□□□□ 0.65
GCFC2-201ENST00000321027 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
GCFC2-201ENST00000321027 ERBINQ96RT1 1412 aa19.13■□□□□ 0.65
GCFC2-201ENST00000321027 CHAF1AQ13111 956 aaPredicted RBP19.13■□□□□ 0.65
GCFC2-201ENST00000321027 ARID3AQ99856 593 aa19.13■□□□□ 0.65
GCFC2-201ENST00000321027 STK31Q9BXU1 1019 aa19.13■□□□□ 0.65
GCFC2-201ENST00000321027 PRAM1Q96QH2 718 aa19.12■□□□□ 0.65
GCFC2-201ENST00000321027 CTTNBP2Q8WZ74 1663 aa19.12■□□□□ 0.65
GCFC2-201ENST00000321027 CSB-PGBD3P0DP91 1061 aa19.12■□□□□ 0.65
GCFC2-201ENST00000321027 C22orf23Q9BZE7 217 aa19.12■□□□□ 0.65
GCFC2-201ENST00000321027 GOLGA6L6A8MZA4 724 aa19.11■□□□□ 0.65
GCFC2-201ENST00000321027 RAPGEF6Q8TEU7 1601 aa19.11■□□□□ 0.65
GCFC2-201ENST00000321027 HMOX1P09601 288 aa19.11■□□□□ 0.65
GCFC2-201ENST00000321027 SLC52A1Q9NWF4 448 aa19.11■□□□□ 0.65
GCFC2-201ENST00000321027 PDZRN3Q9UPQ7 1066 aa19.11■□□□□ 0.65
GCFC2-201ENST00000321027 DDX11L8A8MPP1 907 aa19.11■□□□□ 0.65
GCFC2-201ENST00000321027 ADAMTS12P58397 1594 aa19.1■□□□□ 0.65
GCFC2-201ENST00000321027 DDX49Q9Y6V7 483 aaKnown RBP19.1■□□□□ 0.65
GCFC2-201ENST00000321027 TSR2Q969E8 191 aaKnown RBP19.1■□□□□ 0.65
GCFC2-201ENST00000321027 HMMRO75330 724 aa19.1■□□□□ 0.65
GCFC2-201ENST00000321027 CHMP5Q9NZZ3 219 aa19.1■□□□□ 0.65
GCFC2-201ENST00000321027 CD109Q6YHK3 1445 aa19.1■□□□□ 0.65
GCFC2-201ENST00000321027 KIF21AQ7Z4S6 1674 aa19.09■□□□□ 0.65
GCFC2-201ENST00000321027 PDE3AQ14432 1141 aa19.09■□□□□ 0.65
GCFC2-201ENST00000321027 FOXD4L6Q3SYB3 417 aaPredicted RBP19.08■□□□□ 0.64
GCFC2-201ENST00000321027 FOXD4L3Q6VB84 417 aaPredicted RBP19.08■□□□□ 0.64
GCFC2-201ENST00000321027 PTMSP20962 102 aa19.08■□□□□ 0.64
GCFC2-201ENST00000321027 EXOSC9Q06265 439 aaKnown RBP19.07■□□□□ 0.64
GCFC2-201ENST00000321027 ZNF330Q9Y3S2 320 aaPredicted RBP19.07■□□□□ 0.64
GCFC2-201ENST00000321027 ADGRL1O94910 1474 aa19.07■□□□□ 0.64
GCFC2-201ENST00000321027 ST18O60284 1047 aa19.05■□□□□ 0.64
GCFC2-201ENST00000321027 SLFN5Q08AF3 891 aa19.05■□□□□ 0.64
GCFC2-201ENST00000321027 TXNDC2Q86VQ3 553 aa19.04■□□□□ 0.64
GCFC2-201ENST00000321027 KIAA0556O60303 1618 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms