RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 ADGRL1O94910 1474 aa22.98■■□□□ 1.27
COL9A1-201ENST00000320755 UGGT1Q9NYU2 1555 aa22.97■■□□□ 1.27
COL9A1-201ENST00000320755 PTPRTO14522 1441 aa22.97■■□□□ 1.27
COL9A1-201ENST00000320755 ATP7AQ04656 1500 aa22.96■■□□□ 1.27
COL9A1-201ENST00000320755 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
COL9A1-201ENST00000320755 GGT6Q6P531 493 aa22.95■■□□□ 1.27
COL9A1-201ENST00000320755 PLEKHH1Q9ULM0 1364 aa22.95■■□□□ 1.26
COL9A1-201ENST00000320755 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
COL9A1-201ENST00000320755 STAC3Q96MF2 364 aa22.94■■□□□ 1.26
COL9A1-201ENST00000320755 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
COL9A1-201ENST00000320755 EIF3AQ14152 1382 aaKnown RBP22.93■■□□□ 1.26
COL9A1-201ENST00000320755 IPO9Q96P70 1041 aaKnown RBP22.93■■□□□ 1.26
COL9A1-201ENST00000320755 TNNT2P45379 298 aaPredicted RBP22.92■■□□□ 1.26
COL9A1-201ENST00000320755 ZBTB47Q9UFB7 747 aaPredicted RBP22.92■■□□□ 1.26
COL9A1-201ENST00000320755 GOLGA2Q08379 1002 aa22.91■■□□□ 1.26
COL9A1-201ENST00000320755 APAF1O14727 1248 aa22.91■■□□□ 1.26
COL9A1-201ENST00000320755 TRAK1Q9UPV9 953 aa22.91■■□□□ 1.26
COL9A1-201ENST00000320755 TCERG1O14776 1098 aaKnown RBP22.9■■□□□ 1.26
COL9A1-201ENST00000320755 PDE4AP27815 886 aa22.9■■□□□ 1.26
COL9A1-201ENST00000320755 NPM1P06748 294 aaKnown RBP eCLIP22.9■■□□□ 1.26
COL9A1-201ENST00000320755 DUSP27Q5VZP5 1158 aa22.9■■□□□ 1.26
COL9A1-201ENST00000320755 IQGAP1P46940 1657 aa22.89■■□□□ 1.26
COL9A1-201ENST00000320755 ASXL2Q76L83 1435 aa22.89■■□□□ 1.26
COL9A1-201ENST00000320755 NUTM2DQ5VT03 806 aaPredicted RBP22.89■■□□□ 1.25
COL9A1-201ENST00000320755 CARD14Q9BXL6 1004 aa22.89■■□□□ 1.25
COL9A1-201ENST00000320755 CEP152O94986 1710 aa22.88■■□□□ 1.25
COL9A1-201ENST00000320755 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
COL9A1-201ENST00000320755 TET3O43151 1660 aa22.87■■□□□ 1.25
COL9A1-201ENST00000320755 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
COL9A1-201ENST00000320755 TMEM132EQ6IEE7 984 aa22.87■■□□□ 1.25
COL9A1-201ENST00000320755 CFAP65Q6ZU64 1925 aaKnown RBP22.87■■□□□ 1.25
COL9A1-201ENST00000320755 ARAP3Q8WWN8 1544 aa22.86■■□□□ 1.25
COL9A1-201ENST00000320755 SPINK5Q9NQ38 1064 aaPredicted RBP22.85■■□□□ 1.25
COL9A1-201ENST00000320755 INSRP06213 1382 aa22.84■■□□□ 1.25
COL9A1-201ENST00000320755 DEPDC5O75140 1603 aa22.83■■□□□ 1.24
COL9A1-201ENST00000320755 INO80Q9ULG1 1556 aaPredicted RBP22.82■■□□□ 1.24
COL9A1-201ENST00000320755 SYNMO15061 1565 aa22.82■■□□□ 1.24
COL9A1-201ENST00000320755 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
COL9A1-201ENST00000320755 BACH2Q9BYV9 841 aa22.81■■□□□ 1.24
COL9A1-201ENST00000320755 NOS1P29475 1434 aa22.81■■□□□ 1.24
COL9A1-201ENST00000320755 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
COL9A1-201ENST00000320755 ABCA9Q8IUA7 1624 aa22.81■■□□□ 1.24
COL9A1-201ENST00000320755 SLFN5Q08AF3 891 aa22.8■■□□□ 1.24
COL9A1-201ENST00000320755 CENPJQ9HC77 1338 aaPredicted RBP22.8■■□□□ 1.24
COL9A1-201ENST00000320755 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
COL9A1-201ENST00000320755 ZNF521Q96K83 1311 aa22.79■■□□□ 1.24
COL9A1-201ENST00000320755 DMRT2Q9Y5R5 561 aa22.78■■□□□ 1.24
COL9A1-201ENST00000320755 PIK3C2GO75747 1445 aa22.78■■□□□ 1.24
COL9A1-201ENST00000320755 VWDEQ8N2E2 1590 aa22.78■■□□□ 1.24
COL9A1-201ENST00000320755 BCAR3O75815 825 aa22.77■■□□□ 1.24
COL9A1-201ENST00000320755 MORC1Q86VD1 984 aa22.76■■□□□ 1.23
COL9A1-201ENST00000320755 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.76■■□□□ 1.23
COL9A1-201ENST00000320755 MROH1Q8NDA8 1641 aa22.76■■□□□ 1.23
COL9A1-201ENST00000320755 RAPGEF3O95398 923 aa22.76■■□□□ 1.23
COL9A1-201ENST00000320755 MS4A1P11836 297 aa22.76■■□□□ 1.23
COL9A1-201ENST00000320755 SAFB2Q14151 953 aaKnown RBP eCLIP22.76■■□□□ 1.23
COL9A1-201ENST00000320755 BCL11AQ9H165 835 aa22.76■■□□□ 1.23
COL9A1-201ENST00000320755 ABCA6Q8N139 1617 aa22.75■■□□□ 1.23
COL9A1-201ENST00000320755 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
COL9A1-201ENST00000320755 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
COL9A1-201ENST00000320755 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
COL9A1-201ENST00000320755 KDM5AP29375 1690 aaKnown RBP22.75■■□□□ 1.23
COL9A1-201ENST00000320755 MYOM1P52179 1685 aa22.74■■□□□ 1.23
COL9A1-201ENST00000320755 DEKP35659 375 aaKnown RBP22.73■■□□□ 1.23
COL9A1-201ENST00000320755 NPC1L1Q9UHC9 1359 aa22.73■■□□□ 1.23
COL9A1-201ENST00000320755 KIF1BO60333 1816 aa22.73■■□□□ 1.23
COL9A1-201ENST00000320755 EFCAB6Q5THR3 1501 aa22.72■■□□□ 1.23
COL9A1-201ENST00000320755 CD109Q6YHK3 1445 aa22.72■■□□□ 1.23
COL9A1-201ENST00000320755 KIDINS220Q9ULH0 1771 aa22.72■■□□□ 1.23
COL9A1-201ENST00000320755 LAS1LQ9Y4W2 734 aaKnown RBP22.72■■□□□ 1.23
COL9A1-201ENST00000320755 ZNF518AQ6AHZ1 1483 aa22.71■■□□□ 1.23
COL9A1-201ENST00000320755 RGS3P49796 1198 aa22.71■■□□□ 1.23
COL9A1-201ENST00000320755 PPRC1Q5VV67 1664 aaKnown RBP22.71■■□□□ 1.23
COL9A1-201ENST00000320755 MYOM2P54296 1465 aa22.71■■□□□ 1.23
COL9A1-201ENST00000320755 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.22
COL9A1-201ENST00000320755 NSD3Q9BZ95 1437 aa22.69■■□□□ 1.22
COL9A1-201ENST00000320755 OSCARQ8IYS5 282 aa22.69■■□□□ 1.22
COL9A1-201ENST00000320755 NPATQ14207 1427 aa22.69■■□□□ 1.22
COL9A1-201ENST00000320755 MROH2AA6NES4 1674 aa22.68■■□□□ 1.22
COL9A1-201ENST00000320755 E9PSI1 815 aa22.68■■□□□ 1.22
COL9A1-201ENST00000320755 RTL5Q5HYW3 569 aaPredicted RBP22.68■■□□□ 1.22
COL9A1-201ENST00000320755 CANXP27824 592 aaKnown RBP22.67■■□□□ 1.22
COL9A1-201ENST00000320755 CENPQQ7L2Z9 268 aaPredicted RBP22.67■■□□□ 1.22
COL9A1-201ENST00000320755 STK26Q9P289 416 aa22.67■■□□□ 1.22
COL9A1-201ENST00000320755 KDM2BQ8NHM5 1336 aa22.67■■□□□ 1.22
COL9A1-201ENST00000320755 TRMT2AQ8IZ69 625 aaKnown RBP22.66■■□□□ 1.22
COL9A1-201ENST00000320755 KIAA1210Q9ULL0 1709 aa22.66■■□□□ 1.22
COL9A1-201ENST00000320755 WWC1Q8IX03 1113 aa22.65■■□□□ 1.22
COL9A1-201ENST00000320755 FRAT1Q92837 279 aaPredicted RBP22.65■■□□□ 1.22
COL9A1-201ENST00000320755 MTHFSP49914 203 aa22.64■■□□□ 1.22
COL9A1-201ENST00000320755 CABP2Q9NPB3 220 aa22.63■■□□□ 1.21
COL9A1-201ENST00000320755 NKTRP30414 1462 aaKnown RBP22.63■■□□□ 1.21
COL9A1-201ENST00000320755 SLC4A3P48751 1232 aa22.61■■□□□ 1.21
COL9A1-201ENST00000320755 TCP11L2Q8N4U5 519 aa22.61■■□□□ 1.21
COL9A1-201ENST00000320755 PANK1Q8TE04 598 aa22.61■■□□□ 1.21
COL9A1-201ENST00000320755 POGZQ7Z3K3 1410 aa22.6■■□□□ 1.21
COL9A1-201ENST00000320755 COG6Q9Y2V7 657 aa22.6■■□□□ 1.21
COL9A1-201ENST00000320755 BCL2L13Q9BXK5 485 aa22.59■■□□□ 1.21
COL9A1-201ENST00000320755 NRXN1Q9ULB1 1477 aa22.58■■□□□ 1.21
COL9A1-201ENST00000320755 POLR3AO14802 1390 aaPredicted RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms