RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 FAM13BQ9NYF5 915 aa10.9□□□□□ -0.66
SSBP2-201ENST00000320672 GPATCH3Q96I76 525 aa10.9□□□□□ -0.67
SSBP2-201ENST00000320672 IBSPP21815 317 aaPredicted RBP10.89□□□□□ -0.67
SSBP2-201ENST00000320672 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
SSBP2-201ENST00000320672 VPS8Q8N3P4 1428 aa10.89□□□□□ -0.67
SSBP2-201ENST00000320672 HMMRO75330 724 aa10.89□□□□□ -0.67
SSBP2-201ENST00000320672 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.88□□□□□ -0.67
SSBP2-201ENST00000320672 NLRP13Q86W25 1043 aa10.88□□□□□ -0.67
SSBP2-201ENST00000320672 CCDC85AQ96PX6 553 aaPredicted RBP10.88□□□□□ -0.67
SSBP2-201ENST00000320672 MEX3CQ5U5Q3 659 aaKnown RBP10.87□□□□□ -0.67
SSBP2-201ENST00000320672 PTMSP20962 102 aa10.87□□□□□ -0.67
SSBP2-201ENST00000320672 NUTM2BA6NNL0 878 aaPredicted RBP10.87□□□□□ -0.67
SSBP2-201ENST00000320672 NUTM2EB1AL46 878 aaPredicted RBP10.87□□□□□ -0.67
SSBP2-201ENST00000320672 NUTM2AQ8IVF1 878 aaPredicted RBP10.87□□□□□ -0.67
SSBP2-201ENST00000320672 DIAPH3Q9NSV4 1193 aa10.87□□□□□ -0.67
SSBP2-201ENST00000320672 PRKRIP1Q9H875 184 aaPredicted RBP10.87□□□□□ -0.67
SSBP2-201ENST00000320672 PSME1Q06323 249 aa10.87□□□□□ -0.67
SSBP2-201ENST00000320672 NFXL1Q6ZNB6 911 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 ST18O60284 1047 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 BICD2Q8TD16 824 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 TPM4P67936 248 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 TSR2Q969E8 191 aaKnown RBP10.86□□□□□ -0.67
SSBP2-201ENST00000320672 PIBF1Q8WXW3 757 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 BECN2A8MW95 431 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 WASHC4Q2M389 1173 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 STRN4Q9NRL3 753 aa10.86□□□□□ -0.67
SSBP2-201ENST00000320672 STK3Q13188 491 aa10.85□□□□□ -0.67
SSBP2-201ENST00000320672 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
SSBP2-201ENST00000320672 DNAJC2Q99543 621 aaKnown RBP10.85□□□□□ -0.67
SSBP2-201ENST00000320672 IFIT2P09913 472 aaKnown RBP10.85□□□□□ -0.67
SSBP2-201ENST00000320672 TTC5Q8N0Z6 440 aa10.85□□□□□ -0.67
SSBP2-201ENST00000320672 NLRP2Q9NX02 1062 aa10.85□□□□□ -0.67
SSBP2-201ENST00000320672 RBM42Q9BTD8 480 aaKnown RBP10.85□□□□□ -0.67
SSBP2-201ENST00000320672 RBM10P98175 930 aaKnown RBP10.84□□□□□ -0.67
SSBP2-201ENST00000320672 VPS37DQ86XT2 251 aa10.84□□□□□ -0.67
SSBP2-201ENST00000320672 SIL1Q9H173 461 aa10.84□□□□□ -0.67
SSBP2-201ENST00000320672 CCDC184Q52MB2 194 aa10.84□□□□□ -0.67
SSBP2-201ENST00000320672 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
SSBP2-201ENST00000320672 DHX57Q6P158 1386 aaKnown RBP10.84□□□□□ -0.67
SSBP2-201ENST00000320672 AKAP17AQ02040 695 aaKnown RBP10.84□□□□□ -0.67
SSBP2-201ENST00000320672 DDX54Q8TDD1 881 aaKnown RBP10.84□□□□□ -0.67
SSBP2-201ENST00000320672 ANKRD30AQ9BXX3 1397 aa10.84□□□□□ -0.67
SSBP2-201ENST00000320672 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
SSBP2-201ENST00000320672 SYAP1Q96A49 352 aaPredicted RBP10.83□□□□□ -0.68
SSBP2-201ENST00000320672 MYBBP1AQ9BQG0 1328 aaKnown RBP10.83□□□□□ -0.68
SSBP2-201ENST00000320672 RRP12Q5JTH9 1297 aaKnown RBP10.83□□□□□ -0.68
SSBP2-201ENST00000320672 IL27Q8NEV9 243 aa10.83□□□□□ -0.68
SSBP2-201ENST00000320672 BRPF3Q9ULD4 1205 aa10.83□□□□□ -0.68
SSBP2-201ENST00000320672 BCAR3O75815 825 aa10.83□□□□□ -0.68
SSBP2-201ENST00000320672 TPM3P06753 285 aa10.83□□□□□ -0.68
SSBP2-201ENST00000320672 MAPK8IP2Q13387 824 aaPredicted RBP10.83□□□□□ -0.68
SSBP2-201ENST00000320672 ADAMTS8Q9UP79 889 aa10.83□□□□□ -0.68
SSBP2-201ENST00000320672 GOLGA6L19H0YKK7 550 aa10.82□□□□□ -0.68
SSBP2-201ENST00000320672 GSE1Q14687 1217 aa10.82□□□□□ -0.68
SSBP2-201ENST00000320672 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
SSBP2-201ENST00000320672 CEP89Q96ST8 783 aa10.82□□□□□ -0.68
SSBP2-201ENST00000320672 HSP90AA2PQ14568 343 aaPredicted RBP10.82□□□□□ -0.68
SSBP2-201ENST00000320672 NAP1L1P55209 391 aaKnown RBP10.81□□□□□ -0.68
SSBP2-201ENST00000320672 MIS18AQ9NYP9 233 aa10.81□□□□□ -0.68
SSBP2-201ENST00000320672 HTATSF1O43719 755 aaKnown RBP10.81□□□□□ -0.68
SSBP2-201ENST00000320672 PDILTQ8N807 584 aa10.81□□□□□ -0.68
SSBP2-201ENST00000320672 BRPF1P55201 1214 aaPredicted RBP10.81□□□□□ -0.68
SSBP2-201ENST00000320672 ZBTB9Q96C00 473 aa10.81□□□□□ -0.68
SSBP2-201ENST00000320672 ZNF771Q7L3S4 317 aaPredicted RBP10.81□□□□□ -0.68
SSBP2-201ENST00000320672 DZIP1LQ8IYY4 767 aaKnown RBP10.8□□□□□ -0.68
SSBP2-201ENST00000320672 RAPGEF2Q9Y4G8 1499 aa10.8□□□□□ -0.68
SSBP2-201ENST00000320672 TRIM34Q9BYJ4 488 aa10.8□□□□□ -0.68
SSBP2-201ENST00000320672 R3HCC1Q9Y3T6 440 aaKnown RBP10.8□□□□□ -0.68
SSBP2-201ENST00000320672 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
SSBP2-201ENST00000320672 HOMER1Q86YM7 354 aa10.8□□□□□ -0.68
SSBP2-201ENST00000320672 CPLX1O14810 134 aa10.8□□□□□ -0.68
SSBP2-201ENST00000320672 PPFIA3O75145 1194 aa10.8□□□□□ -0.68
SSBP2-201ENST00000320672 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
SSBP2-201ENST00000320672 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 SPC24Q8NBT2 197 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 FHAD1B1AJZ9 1412 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 GOLGA6L1Q8N7Z2 621 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 ATP2B2Q01814 1243 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 SYNE3Q6ZMZ3 975 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 CFAP70Q5T0N1 1121 aa10.79□□□□□ -0.68
SSBP2-201ENST00000320672 CENPQQ7L2Z9 268 aaPredicted RBP10.79□□□□□ -0.68
SSBP2-201ENST00000320672 BICDL1Q6ZP65 573 aa10.78□□□□□ -0.68
SSBP2-201ENST00000320672 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
SSBP2-201ENST00000320672 TXNDC2Q86VQ3 553 aa10.78□□□□□ -0.68
SSBP2-201ENST00000320672 MYL6BP14649 208 aa10.78□□□□□ -0.68
SSBP2-201ENST00000320672 EXOSC9Q06265 439 aaKnown RBP10.78□□□□□ -0.68
SSBP2-201ENST00000320672 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
SSBP2-201ENST00000320672 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
SSBP2-201ENST00000320672 TCEAL9Q9UHQ7 104 aa10.78□□□□□ -0.68
SSBP2-201ENST00000320672 NLRP6P59044 892 aa10.77□□□□□ -0.68
SSBP2-201ENST00000320672 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.68
SSBP2-201ENST00000320672 MTHFSP49914 203 aa10.77□□□□□ -0.68
SSBP2-201ENST00000320672 WWC3Q9ULE0 1092 aa10.77□□□□□ -0.68
SSBP2-201ENST00000320672 FAM69CQ0P6D2 419 aa10.77□□□□□ -0.69
SSBP2-201ENST00000320672 PIP4K2BP78356 416 aa10.77□□□□□ -0.69
SSBP2-201ENST00000320672 ESCO1Q5FWF5 840 aa10.77□□□□□ -0.69
SSBP2-201ENST00000320672 USP47Q96K76 1375 aa10.77□□□□□ -0.69
SSBP2-201ENST00000320672 TRIM29Q14134 588 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms