RNA–Protein interactions for RNA: ENST00000318220.10

NBPF3-201, Transcript of NBPF member 3, humanhuman

TSL 2

Gene NBPF3, Length 4,401 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-201ENST00000318220 LMOD3Q0VAK6 560 aa16.86■□□□□ 0.29
NBPF3-201ENST00000318220 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
NBPF3-201ENST00000318220 AKNAQ7Z591 1439 aa16.86■□□□□ 0.29
NBPF3-201ENST00000318220 IQGAP2Q13576 1575 aa16.86■□□□□ 0.29
NBPF3-201ENST00000318220 FYCO1Q9BQS8 1478 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 USP47Q96K76 1375 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 RALBP1Q15311 655 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 PLEKHH2Q8IVE3 1493 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 KAT6BQ8WYB5 2073 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 AIMP1Q12904 312 aaKnown RBP16.85■□□□□ 0.29
NBPF3-201ENST00000318220 MS4A1P11836 297 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 ITPRIPQ8IWB1 547 aa16.85■□□□□ 0.29
NBPF3-201ENST00000318220 ZNF428Q96B54 188 aa16.84■□□□□ 0.29
NBPF3-201ENST00000318220 CHMP4BQ9H444 224 aaKnown RBP16.84■□□□□ 0.29
NBPF3-201ENST00000318220 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
NBPF3-201ENST00000318220 FANCAO15360 1455 aa16.84■□□□□ 0.29
NBPF3-201ENST00000318220 KIF21BO75037 1637 aa16.83■□□□□ 0.29
NBPF3-201ENST00000318220 B4GALNT3Q6L9W6 998 aa16.82■□□□□ 0.28
NBPF3-201ENST00000318220 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
NBPF3-201ENST00000318220 CADPS2Q86UW7 1296 aa16.82■□□□□ 0.28
NBPF3-201ENST00000318220 C8orf37Q96NL8 207 aa16.81■□□□□ 0.28
NBPF3-201ENST00000318220 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
NBPF3-201ENST00000318220 EPRSP07814 1512 aaKnown RBP16.81■□□□□ 0.28
NBPF3-201ENST00000318220 CASC1Q6TDU7 716 aa16.8■□□□□ 0.28
NBPF3-201ENST00000318220 CCDC61Q9Y6R9 512 aa16.8■□□□□ 0.28
NBPF3-201ENST00000318220 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
NBPF3-201ENST00000318220 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
NBPF3-201ENST00000318220 PHF8Q9UPP1 1060 aa16.78■□□□□ 0.28
NBPF3-201ENST00000318220 APAF1O14727 1248 aa16.78■□□□□ 0.28
NBPF3-201ENST00000318220 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
NBPF3-201ENST00000318220 RIPK4P57078 832 aa16.77■□□□□ 0.28
NBPF3-201ENST00000318220 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.28
NBPF3-201ENST00000318220 UNC13AQ9UPW8 1703 aa16.77■□□□□ 0.28
NBPF3-201ENST00000318220 MTHFSP49914 203 aa16.76■□□□□ 0.27
NBPF3-201ENST00000318220 CHRNA2Q15822 529 aa16.76■□□□□ 0.27
NBPF3-201ENST00000318220 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
NBPF3-201ENST00000318220 RRS1Q15050 365 aaKnown RBP16.76■□□□□ 0.27
NBPF3-201ENST00000318220 TOMM22Q9NS69 142 aa16.76■□□□□ 0.27
NBPF3-201ENST00000318220 ERBINQ96RT1 1412 aa16.76■□□□□ 0.27
NBPF3-201ENST00000318220 C9orf78Q9NZ63 289 aaPredicted RBP16.76■□□□□ 0.27
NBPF3-201ENST00000318220 TSPYL4Q9UJ04 414 aa16.75■□□□□ 0.27
NBPF3-201ENST00000318220 LMTK3Q96Q04 1460 aa16.74■□□□□ 0.27
NBPF3-201ENST00000318220 MIA2Q96PC5 1412 aa16.73■□□□□ 0.27
NBPF3-201ENST00000318220 RAD21O60216 631 aa16.73■□□□□ 0.27
NBPF3-201ENST00000318220 VPS37DQ86XT2 251 aa16.73■□□□□ 0.27
NBPF3-201ENST00000318220 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
NBPF3-201ENST00000318220 PTCD1O75127 700 aaKnown RBP16.73■□□□□ 0.27
NBPF3-201ENST00000318220 SULT6B1Q6IMI4 303 aa16.73■□□□□ 0.27
NBPF3-201ENST00000318220 ZNF530Q6P9A1 599 aaPredicted RBP16.73■□□□□ 0.27
NBPF3-201ENST00000318220 KRT28Q7Z3Y7 464 aa16.72■□□□□ 0.27
NBPF3-201ENST00000318220 FKBP5Q13451 457 aaPredicted RBP16.72■□□□□ 0.27
NBPF3-201ENST00000318220 TNRQ92752 1358 aa16.72■□□□□ 0.27
NBPF3-201ENST00000318220 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.72■□□□□ 0.27
NBPF3-201ENST00000318220 RRBP1Q9P2E9 1410 aaKnown RBP16.72■□□□□ 0.27
NBPF3-201ENST00000318220 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
NBPF3-201ENST00000318220 PLEKHO1Q53GL0 409 aaPredicted RBP16.72■□□□□ 0.27
NBPF3-201ENST00000318220 BICDL1Q6ZP65 573 aa16.71■□□□□ 0.27
NBPF3-201ENST00000318220 HDAC5Q9UQL6 1122 aa16.71■□□□□ 0.27
NBPF3-201ENST00000318220 TEX14Q8IWB6 1497 aa16.71■□□□□ 0.27
NBPF3-201ENST00000318220 CABP4P57796 275 aa16.71■□□□□ 0.26
NBPF3-201ENST00000318220 BCL11BQ9C0K0 894 aaPredicted RBP16.71■□□□□ 0.26
NBPF3-201ENST00000318220 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
NBPF3-201ENST00000318220 MSH6P52701 1360 aa16.7■□□□□ 0.26
NBPF3-201ENST00000318220 PLIN1O60240 522 aa16.69■□□□□ 0.26
NBPF3-201ENST00000318220 WWC3Q9ULE0 1092 aa16.69■□□□□ 0.26
NBPF3-201ENST00000318220 NCBP3Q53F19 620 aaKnown RBP16.69■□□□□ 0.26
NBPF3-201ENST00000318220 RIC3Q7Z5B4 369 aa16.69■□□□□ 0.26
NBPF3-201ENST00000318220 CABLES1Q8TDN4 633 aa16.69■□□□□ 0.26
NBPF3-201ENST00000318220 EFCAB5A4FU69 1503 aa16.68■□□□□ 0.26
NBPF3-201ENST00000318220 MPRIPQ6WCQ1 1025 aa16.67■□□□□ 0.26
NBPF3-201ENST00000318220 CCDC141Q6ZP82 1450 aa16.67■□□□□ 0.26
NBPF3-201ENST00000318220 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
NBPF3-201ENST00000318220 DDX58O95786 925 aaKnown RBP16.66■□□□□ 0.26
NBPF3-201ENST00000318220 CLSTN1O94985 981 aa16.66■□□□□ 0.26
NBPF3-201ENST00000318220 USHBP1Q8N6Y0 703 aa16.66■□□□□ 0.26
NBPF3-201ENST00000318220 RPGRIP1LQ68CZ1 1315 aa16.66■□□□□ 0.26
NBPF3-201ENST00000318220 ADGRF5Q8IZF2 1346 aa16.66■□□□□ 0.26
NBPF3-201ENST00000318220 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
NBPF3-201ENST00000318220 PRKAR2BP31323 418 aa16.65■□□□□ 0.26
NBPF3-201ENST00000318220 KIAA1211Q6ZU35 1233 aa16.65■□□□□ 0.26
NBPF3-201ENST00000318220 ATP10BO94823 1461 aa16.64■□□□□ 0.25
NBPF3-201ENST00000318220 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 ANKRD30BQ9BXX2 1392 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 EXOC5O00471 708 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 HFM1A2PYH4 1435 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 DAPK1P53355 1430 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 HMMRO75330 724 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 SPG7Q9UQ90 795 aa16.63■□□□□ 0.25
NBPF3-201ENST00000318220 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
NBPF3-201ENST00000318220 NBPF8Q3BBV2 869 aa16.61■□□□□ 0.25
NBPF3-201ENST00000318220 ZNF219Q9P2Y4 722 aaPredicted RBP16.61■□□□□ 0.25
NBPF3-201ENST00000318220 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
NBPF3-201ENST00000318220 KCNA6P17658 529 aa16.6■□□□□ 0.25
NBPF3-201ENST00000318220 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
NBPF3-201ENST00000318220 NME9Q86XW9 330 aa16.59■□□□□ 0.25
NBPF3-201ENST00000318220 EHBP1L1Q8N3D4 1523 aa16.59■□□□□ 0.25
NBPF3-201ENST00000318220 GAS2L2Q8NHY3 880 aa16.59■□□□□ 0.25
NBPF3-201ENST00000318220 TRIM34Q9BYJ4 488 aa16.59■□□□□ 0.25
NBPF3-201ENST00000318220 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms