RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 SLC12A5Q9H2X9 1139 aa17.13■□□□□ 0.33
PCDHB9-201ENST00000316105 SHANK2Q9UPX8 1470 aa17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 FAM135AQ9P2D6 1515 aa17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 IPO8O15397 1037 aaKnown RBP17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 KDM6BO15054 1643 aa17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 NUTM2FA1L443 756 aa17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 RWDD1Q9H446 243 aaPredicted RBP17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 CHMP4BQ9H444 224 aaKnown RBP17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
PCDHB9-201ENST00000316105 PLCH2O75038 1416 aa17.11■□□□□ 0.33
PCDHB9-201ENST00000316105 ADGRL2O95490 1459 aa17.11■□□□□ 0.33
PCDHB9-201ENST00000316105 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 PRKCSHP14314 528 aaPredicted RBP17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 MTHFSP49914 203 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 FANCAO15360 1455 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 TRHP20396 242 aaPredicted RBP17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 DISP3Q9P2K9 1392 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 PMFBP1Q8TBY8 1022 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 RUNDC1Q96C34 613 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
PCDHB9-201ENST00000316105 LMOD2Q6P5Q4 547 aa17.08■□□□□ 0.32
PCDHB9-201ENST00000316105 CALD1Q05682 793 aaKnown RBP17.07■□□□□ 0.32
PCDHB9-201ENST00000316105 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
PCDHB9-201ENST00000316105 ADGRF5Q8IZF2 1346 aa17.07■□□□□ 0.32
PCDHB9-201ENST00000316105 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
PCDHB9-201ENST00000316105 CD109Q6YHK3 1445 aa17.06■□□□□ 0.32
PCDHB9-201ENST00000316105 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
PCDHB9-201ENST00000316105 DUOX2Q9NRD8 1548 aa17.06■□□□□ 0.32
PCDHB9-201ENST00000316105 TCP11L2Q8N4U5 519 aa17.05■□□□□ 0.32
PCDHB9-201ENST00000316105 DIAPH1O60610 1272 aaKnown RBP17.03■□□□□ 0.32
PCDHB9-201ENST00000316105 ARHGEF12Q9NZN5 1544 aa17.02■□□□□ 0.32
PCDHB9-201ENST00000316105 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
PCDHB9-201ENST00000316105 RTF1Q92541 710 aaKnown RBP17.02■□□□□ 0.32
PCDHB9-201ENST00000316105 EID1Q9Y6B2 187 aa17.02■□□□□ 0.32
PCDHB9-201ENST00000316105 ZKSCAN2Q63HK3 967 aa17.02■□□□□ 0.31
PCDHB9-201ENST00000316105 PRAM1Q96QH2 718 aa17.02■□□□□ 0.31
PCDHB9-201ENST00000316105 DHX29Q7Z478 1369 aaKnown RBP17.01■□□□□ 0.31
PCDHB9-201ENST00000316105 SLC52A1Q9NWF4 448 aa17.01■□□□□ 0.31
PCDHB9-201ENST00000316105 ELL2O00472 640 aaPredicted RBP17.01■□□□□ 0.31
PCDHB9-201ENST00000316105 HAP1P54257 671 aaPredicted RBP17.01■□□□□ 0.31
PCDHB9-201ENST00000316105 PANK1Q8TE04 598 aa17.01■□□□□ 0.31
PCDHB9-201ENST00000316105 COG3Q96JB2 828 aa17.01■□□□□ 0.31
PCDHB9-201ENST00000316105 SCAF11Q99590 1463 aaKnown RBP17■□□□□ 0.31
PCDHB9-201ENST00000316105 RIPK4P57078 832 aa17■□□□□ 0.31
PCDHB9-201ENST00000316105 ABCC2Q92887 1545 aa17■□□□□ 0.31
PCDHB9-201ENST00000316105 PAK3O75914 559 aaPredicted RBP17■□□□□ 0.31
PCDHB9-201ENST00000316105 RPGRIP1LQ68CZ1 1315 aa17■□□□□ 0.31
PCDHB9-201ENST00000316105 SPRYD3Q8NCJ5 442 aa16.99■□□□□ 0.31
PCDHB9-201ENST00000316105 NGDNQ8NEJ9 315 aaKnown RBP16.99■□□□□ 0.31
PCDHB9-201ENST00000316105 TESK2Q96S53 571 aa16.99■□□□□ 0.31
PCDHB9-201ENST00000316105 KDM5BQ9UGL1 1544 aa16.98■□□□□ 0.31
PCDHB9-201ENST00000316105 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
PCDHB9-201ENST00000316105 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
PCDHB9-201ENST00000316105 BCAR3O75815 825 aa16.98■□□□□ 0.31
PCDHB9-201ENST00000316105 ADGBQ8N7X0 1667 aa16.98■□□□□ 0.31
PCDHB9-201ENST00000316105 NSD3Q9BZ95 1437 aa16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 APBB1O00213 710 aa16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 SLC4A3P48751 1232 aa16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 CASC1Q6TDU7 716 aa16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 LMOD3Q0VAK6 560 aa16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 SLKQ9H2G2 1235 aaPredicted RBP16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 ANP32BQ92688 251 aaKnown RBP16.97■□□□□ 0.31
PCDHB9-201ENST00000316105 ABCA8O94911 1581 aa16.96■□□□□ 0.31
PCDHB9-201ENST00000316105 ASXL2Q76L83 1435 aa16.96■□□□□ 0.3
PCDHB9-201ENST00000316105 NOS1P29475 1434 aa16.95■□□□□ 0.3
PCDHB9-201ENST00000316105 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
PCDHB9-201ENST00000316105 WDR7Q9Y4E6 1490 aa16.95■□□□□ 0.3
PCDHB9-201ENST00000316105 HMOX1P09601 288 aa16.95■□□□□ 0.3
PCDHB9-201ENST00000316105 MFAP1P55081 439 aaKnown RBP16.95■□□□□ 0.3
PCDHB9-201ENST00000316105 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
PCDHB9-201ENST00000316105 HSCBQ8IWL3 235 aa16.94■□□□□ 0.3
PCDHB9-201ENST00000316105 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
PCDHB9-201ENST00000316105 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHB9-201ENST00000316105 PARD3Q8TEW0 1356 aa16.94■□□□□ 0.3
PCDHB9-201ENST00000316105 A2MP01023 1474 aa16.93■□□□□ 0.3
PCDHB9-201ENST00000316105 MBD5Q9P267 1494 aa16.93■□□□□ 0.3
PCDHB9-201ENST00000316105 AMPHP49418 695 aa16.93■□□□□ 0.3
PCDHB9-201ENST00000316105 SLFN5Q08AF3 891 aa16.92■□□□□ 0.3
PCDHB9-201ENST00000316105 CABP1Q9NZU7 370 aa16.92■□□□□ 0.3
PCDHB9-201ENST00000316105 IDI1Q13907 227 aa16.91■□□□□ 0.3
PCDHB9-201ENST00000316105 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
PCDHB9-201ENST00000316105 C20orf194Q5TEA3 1177 aa16.9■□□□□ 0.3
PCDHB9-201ENST00000316105 PER1O15534 1290 aaPredicted RBP16.9■□□□□ 0.3
PCDHB9-201ENST00000316105 AMER1Q5JTC6 1135 aaPredicted RBP16.9■□□□□ 0.3
PCDHB9-201ENST00000316105 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
PCDHB9-201ENST00000316105 DDX19BQ9UMR2 479 aa16.89■□□□□ 0.29
PCDHB9-201ENST00000316105 LTV1Q96GA3 475 aaPredicted RBP16.89■□□□□ 0.29
PCDHB9-201ENST00000316105 WWC1Q8IX03 1113 aa16.89■□□□□ 0.29
PCDHB9-201ENST00000316105 TSR2Q969E8 191 aaKnown RBP16.88■□□□□ 0.29
PCDHB9-201ENST00000316105 ARHGEF5Q12774 1597 aa16.88■□□□□ 0.29
PCDHB9-201ENST00000316105 C14orf93Q9H972 538 aaKnown RBP16.88■□□□□ 0.29
PCDHB9-201ENST00000316105 LRRIQ1Q96JM4 1722 aa16.88■□□□□ 0.29
PCDHB9-201ENST00000316105 TXNDC2Q86VQ3 553 aa16.88■□□□□ 0.29
PCDHB9-201ENST00000316105 PDE3AQ14432 1141 aa16.88■□□□□ 0.29
PCDHB9-201ENST00000316105 EIF2AK4Q9P2K8 1649 aaKnown RBP16.87■□□□□ 0.29
PCDHB9-201ENST00000316105 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
PCDHB9-201ENST00000316105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
PCDHB9-201ENST00000316105 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms