RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 ZKSCAN2Q63HK3 967 aa16.1■□□□□ 0.17
SH3PXD2A-201ENST00000315994 GPATCH3Q96I76 525 aa16.1■□□□□ 0.17
SH3PXD2A-201ENST00000315994 NBPF1Q3BBV0 1214 aa16.08■□□□□ 0.17
SH3PXD2A-201ENST00000315994 RPGRIP1LQ68CZ1 1315 aa16.08■□□□□ 0.17
SH3PXD2A-201ENST00000315994 ABCC5O15440 1437 aa16.08■□□□□ 0.17
SH3PXD2A-201ENST00000315994 NBPF8Q3BBV2 869 aa16.08■□□□□ 0.17
SH3PXD2A-201ENST00000315994 TPRNQ4KMQ1 711 aa16.08■□□□□ 0.17
SH3PXD2A-201ENST00000315994 RIPK4P57078 832 aa16.07■□□□□ 0.16
SH3PXD2A-201ENST00000315994 CD109Q6YHK3 1445 aa16.07■□□□□ 0.16
SH3PXD2A-201ENST00000315994 TEFQ10587 303 aa16.07■□□□□ 0.16
SH3PXD2A-201ENST00000315994 TXNDC2Q86VQ3 553 aa16.07■□□□□ 0.16
SH3PXD2A-201ENST00000315994 ERBINQ96RT1 1412 aa16.06■□□□□ 0.16
SH3PXD2A-201ENST00000315994 CENPQQ7L2Z9 268 aaPredicted RBP16.06■□□□□ 0.16
SH3PXD2A-201ENST00000315994 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
SH3PXD2A-201ENST00000315994 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
SH3PXD2A-201ENST00000315994 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
SH3PXD2A-201ENST00000315994 EVA1CP58658 441 aa16.05■□□□□ 0.16
SH3PXD2A-201ENST00000315994 AKNAQ7Z591 1439 aa16.05■□□□□ 0.16
SH3PXD2A-201ENST00000315994 ANKRD30BQ9BXX2 1392 aa16.05■□□□□ 0.16
SH3PXD2A-201ENST00000315994 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
SH3PXD2A-201ENST00000315994 PTMAP06454 111 aaKnown RBP16.05■□□□□ 0.16
SH3PXD2A-201ENST00000315994 TAF7LQ5H9L4 462 aa16.05■□□□□ 0.16
SH3PXD2A-201ENST00000315994 ATF3P18847 181 aa16.04■□□□□ 0.16
SH3PXD2A-201ENST00000315994 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
SH3PXD2A-201ENST00000315994 POGZQ7Z3K3 1410 aa16.04■□□□□ 0.16
SH3PXD2A-201ENST00000315994 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 PLIN1O60240 522 aa16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 THEMISQ8N1K5 641 aaPredicted RBP16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 TAOK2Q9UL54 1235 aa16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 TULP1O00294 542 aaPredicted RBP16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 THOC2Q8NI27 1593 aaKnown RBP16.03■□□□□ 0.16
SH3PXD2A-201ENST00000315994 TRIM6-TRIM34B2RNG4 842 aa16.02■□□□□ 0.16
SH3PXD2A-201ENST00000315994 SPRYD3Q8NCJ5 442 aa16.02■□□□□ 0.16
SH3PXD2A-201ENST00000315994 GOLGA6L4A6NEF3 574 aa16.02■□□□□ 0.15
SH3PXD2A-201ENST00000315994 MFAP1P55081 439 aaKnown RBP16.02■□□□□ 0.15
SH3PXD2A-201ENST00000315994 CRBNQ96SW2 442 aa16.02■□□□□ 0.15
SH3PXD2A-201ENST00000315994 EXOC6Q8TAG9 804 aa16.01■□□□□ 0.15
SH3PXD2A-201ENST00000315994 TTC5Q8N0Z6 440 aa16■□□□□ 0.15
SH3PXD2A-201ENST00000315994 GNAI1P63096 354 aa16■□□□□ 0.15
SH3PXD2A-201ENST00000315994 PPP2R1AP30153 589 aa16■□□□□ 0.15
SH3PXD2A-201ENST00000315994 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
SH3PXD2A-201ENST00000315994 MTHFSP49914 203 aa15.99■□□□□ 0.15
SH3PXD2A-201ENST00000315994 API5Q9BZZ5 524 aaKnown RBP15.99■□□□□ 0.15
SH3PXD2A-201ENST00000315994 COG6Q9Y2V7 657 aa15.99■□□□□ 0.15
SH3PXD2A-201ENST00000315994 WDR97A6NE52 1622 aa15.98■□□□□ 0.15
SH3PXD2A-201ENST00000315994 RAPGEF6Q8TEU7 1601 aa15.98■□□□□ 0.15
SH3PXD2A-201ENST00000315994 GPRASP1Q5JY77 1395 aa15.98■□□□□ 0.15
SH3PXD2A-201ENST00000315994 HMOX1P09601 288 aa15.97■□□□□ 0.15
SH3PXD2A-201ENST00000315994 ADAMTS8Q9UP79 889 aa15.97■□□□□ 0.15
SH3PXD2A-201ENST00000315994 NCOA1Q15788 1441 aa15.97■□□□□ 0.15
SH3PXD2A-201ENST00000315994 NLRP6P59044 892 aa15.97■□□□□ 0.15
SH3PXD2A-201ENST00000315994 DZIP1LQ8IYY4 767 aaKnown RBP15.97■□□□□ 0.15
SH3PXD2A-201ENST00000315994 PTMSP20962 102 aa15.96■□□□□ 0.15
SH3PXD2A-201ENST00000315994 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
SH3PXD2A-201ENST00000315994 CDK19Q9BWU1 502 aa15.96■□□□□ 0.15
SH3PXD2A-201ENST00000315994 ISY1Q9ULR0 285 aaKnown RBP15.96■□□□□ 0.15
SH3PXD2A-201ENST00000315994 KIF16BQ96L93 1317 aa15.96■□□□□ 0.15
SH3PXD2A-201ENST00000315994 GBP4Q96PP9 640 aa15.96■□□□□ 0.14
SH3PXD2A-201ENST00000315994 NEXNQ0ZGT2 675 aa15.95■□□□□ 0.14
SH3PXD2A-201ENST00000315994 CTTNBP2Q8WZ74 1663 aa15.95■□□□□ 0.14
SH3PXD2A-201ENST00000315994 EIF2S2P20042 333 aaKnown RBP15.95■□□□□ 0.14
SH3PXD2A-201ENST00000315994 PRKCSHP14314 528 aaPredicted RBP15.94■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ZNF692Q9BU19 519 aaPredicted RBP15.94■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ANKRD45Q5TZF3 282 aa15.94■□□□□ 0.14
SH3PXD2A-201ENST00000315994 RAPGEF4Q8WZA2 1011 aa15.94■□□□□ 0.14
SH3PXD2A-201ENST00000315994 SLC12A5Q9H2X9 1139 aa15.94■□□□□ 0.14
SH3PXD2A-201ENST00000315994 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 FANCAO15360 1455 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 IPO9Q96P70 1041 aaKnown RBP15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 RTEL1-TNFRSF6BF6WH68 1400 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 GOLGA6L6A8MZA4 724 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 G3V3G9 751 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 PLCB2Q00722 1185 aa15.93■□□□□ 0.14
SH3PXD2A-201ENST00000315994 FAM161AQ3B820 660 aa15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 GNL2Q13823 731 aaKnown RBP15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 NUTM2GQ5VZR2 741 aa15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ABTB2Q8N961 1025 aa15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 DDX58O95786 925 aaKnown RBP15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 GTF2E1P29083 439 aaPredicted RBP15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ESCO1Q5FWF5 840 aa15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 PROSER2Q86WR7 435 aaPredicted RBP15.92■□□□□ 0.14
SH3PXD2A-201ENST00000315994 AAMPQ13685 434 aa15.91■□□□□ 0.14
SH3PXD2A-201ENST00000315994 GPATCH8Q9UKJ3 1502 aaKnown RBP15.91■□□□□ 0.14
SH3PXD2A-201ENST00000315994 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
SH3PXD2A-201ENST00000315994 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
SH3PXD2A-201ENST00000315994 SLKQ9H2G2 1235 aaPredicted RBP15.91■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
SH3PXD2A-201ENST00000315994 ANKLE2Q86XL3 938 aa15.9■□□□□ 0.14
SH3PXD2A-201ENST00000315994 C9orf78Q9NZ63 289 aaPredicted RBP15.9■□□□□ 0.14
SH3PXD2A-201ENST00000315994 DENND4BO75064 1496 aaPredicted RBP15.9■□□□□ 0.14
SH3PXD2A-201ENST00000315994 L1TD1Q5T7N2 865 aaKnown RBP15.9■□□□□ 0.14
SH3PXD2A-201ENST00000315994 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
SH3PXD2A-201ENST00000315994 FKBP5Q13451 457 aaPredicted RBP15.89■□□□□ 0.13
SH3PXD2A-201ENST00000315994 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
SH3PXD2A-201ENST00000315994 FAM135AQ9P2D6 1515 aa15.88■□□□□ 0.13
SH3PXD2A-201ENST00000315994 NLRP2Q9NX02 1062 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms