RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SIGLEC1Q9BZZ2 1709 aa15.5■□□□□ 0.07
LDLRAD3-201ENST00000315571 LMTK2Q8IWU2 1503 aa15.49■□□□□ 0.07
LDLRAD3-201ENST00000315571 TET3O43151 1660 aa15.49■□□□□ 0.07
LDLRAD3-201ENST00000315571 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
LDLRAD3-201ENST00000315571 PNNQ9H307 717 aaKnown RBP15.48■□□□□ 0.07
LDLRAD3-201ENST00000315571 CEP152O94986 1710 aa15.48■□□□□ 0.07
LDLRAD3-201ENST00000315571 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
LDLRAD3-201ENST00000315571 FRAT1Q92837 279 aaPredicted RBP15.46■□□□□ 0.07
LDLRAD3-201ENST00000315571 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
LDLRAD3-201ENST00000315571 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
LDLRAD3-201ENST00000315571 NPATQ14207 1427 aa15.45■□□□□ 0.06
LDLRAD3-201ENST00000315571 TONSLQ96HA7 1378 aa15.45■□□□□ 0.06
LDLRAD3-201ENST00000315571 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
LDLRAD3-201ENST00000315571 RPRD2Q5VT52 1461 aaKnown RBP15.44■□□□□ 0.06
LDLRAD3-201ENST00000315571 E9PCH4 1651 aa15.44■□□□□ 0.06
LDLRAD3-201ENST00000315571 CAMSAP1Q5T5Y3 1602 aa15.43■□□□□ 0.06
LDLRAD3-201ENST00000315571 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
LDLRAD3-201ENST00000315571 ARHGAP31Q2M1Z3 1444 aa15.42■□□□□ 0.06
LDLRAD3-201ENST00000315571 CCER2I3L3R5 266 aa15.42■□□□□ 0.06
LDLRAD3-201ENST00000315571 C11orf95C9JLR9 678 aaPredicted RBP15.42■□□□□ 0.06
LDLRAD3-201ENST00000315571 CLTCQ00610 1675 aaKnown RBP15.42■□□□□ 0.06
LDLRAD3-201ENST00000315571 ZMYM3Q14202 1370 aa15.42■□□□□ 0.06
LDLRAD3-201ENST00000315571 FAM43AQ8N2R8 423 aa15.41■□□□□ 0.06
LDLRAD3-201ENST00000315571 PLA2R1Q13018 1463 aa15.41■□□□□ 0.06
LDLRAD3-201ENST00000315571 PTPRTO14522 1441 aa15.4■□□□□ 0.06
LDLRAD3-201ENST00000315571 FBXO31Q5XUX0 539 aaPredicted RBP15.4■□□□□ 0.06
LDLRAD3-201ENST00000315571 SENP3-EIF4A1A0A087X0R7 540 aa15.39■□□□□ 0.05
LDLRAD3-201ENST00000315571 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
LDLRAD3-201ENST00000315571 TRPM2O94759 1503 aa15.38■□□□□ 0.05
LDLRAD3-201ENST00000315571 RGL3Q3MIN7 710 aa15.37■□□□□ 0.05
LDLRAD3-201ENST00000315571 SPHKAPQ2M3C7 1700 aa15.37■□□□□ 0.05
LDLRAD3-201ENST00000315571 SLC4A3P48751 1232 aa15.37■□□□□ 0.05
LDLRAD3-201ENST00000315571 CEBPAP49715 358 aaPredicted RBP15.36■□□□□ 0.05
LDLRAD3-201ENST00000315571 WASHC2AQ641Q2 1341 aa15.36■□□□□ 0.05
LDLRAD3-201ENST00000315571 NOS1P29475 1434 aa15.36■□□□□ 0.05
LDLRAD3-201ENST00000315571 ERVK-7P63135 1459 aa15.36■□□□□ 0.05
LDLRAD3-201ENST00000315571 L3MBTL2Q969R5 705 aa15.35■□□□□ 0.05
LDLRAD3-201ENST00000315571 RRP9O43818 475 aaKnown RBP15.35■□□□□ 0.05
LDLRAD3-201ENST00000315571 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
LDLRAD3-201ENST00000315571 FER1L4A9Z1Z3 1794 aa15.35■□□□□ 0.05
LDLRAD3-201ENST00000315571 AMER1Q5JTC6 1135 aaPredicted RBP15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 ARID3AQ99856 593 aa15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 STAG3Q9UJ98 1225 aa15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 CFAP65Q6ZU64 1925 aaKnown RBP15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 NFKBIBQ15653 356 aa15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 BCL11BQ9C0K0 894 aaPredicted RBP15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 UGGT1Q9NYU2 1555 aa15.34■□□□□ 0.05
LDLRAD3-201ENST00000315571 PDIA4P13667 645 aaKnown RBP15.33■□□□□ 0.05
LDLRAD3-201ENST00000315571 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.05
LDLRAD3-201ENST00000315571 MADDQ8WXG6 1647 aa15.33■□□□□ 0.05
LDLRAD3-201ENST00000315571 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
LDLRAD3-201ENST00000315571 TNRQ92752 1358 aa15.32■□□□□ 0.04
LDLRAD3-201ENST00000315571 IDI1Q13907 227 aa15.32■□□□□ 0.04
LDLRAD3-201ENST00000315571 CLTCL1P53675 1640 aa15.32■□□□□ 0.04
LDLRAD3-201ENST00000315571 FGD1P98174 961 aa15.32■□□□□ 0.04
LDLRAD3-201ENST00000315571 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
LDLRAD3-201ENST00000315571 KDM2AQ9Y2K7 1162 aa15.31■□□□□ 0.04
LDLRAD3-201ENST00000315571 MROH2AA6NES4 1674 aa15.31■□□□□ 0.04
LDLRAD3-201ENST00000315571 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
LDLRAD3-201ENST00000315571 SYNMO15061 1565 aa15.3■□□□□ 0.04
LDLRAD3-201ENST00000315571 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
LDLRAD3-201ENST00000315571 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
LDLRAD3-201ENST00000315571 SPATA31D1Q6ZQQ2 1576 aa15.29■□□□□ 0.04
LDLRAD3-201ENST00000315571 ADAMTSL3P82987 1691 aa15.29■□□□□ 0.04
LDLRAD3-201ENST00000315571 AAMPQ13685 434 aa15.28■□□□□ 0.04
LDLRAD3-201ENST00000315571 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
LDLRAD3-201ENST00000315571 MRS2Q9HD23 443 aa15.27■□□□□ 0.04
LDLRAD3-201ENST00000315571 C3P01024 1663 aa15.26■□□□□ 0.03
LDLRAD3-201ENST00000315571 POLR3GLQ9BT43 218 aa15.26■□□□□ 0.03
LDLRAD3-201ENST00000315571 RGS3P49796 1198 aa15.25■□□□□ 0.03
LDLRAD3-201ENST00000315571 PTPRMP28827 1452 aa15.24■□□□□ 0.03
LDLRAD3-201ENST00000315571 KIF1BO60333 1816 aa15.24■□□□□ 0.03
LDLRAD3-201ENST00000315571 PIK3C2BO00750 1634 aa15.24■□□□□ 0.03
LDLRAD3-201ENST00000315571 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
LDLRAD3-201ENST00000315571 PDE4AP27815 886 aa15.23■□□□□ 0.03
LDLRAD3-201ENST00000315571 NLRP1Q9C000 1473 aa15.22■□□□□ 0.03
LDLRAD3-201ENST00000315571 RPGRIP1LQ68CZ1 1315 aa15.22■□□□□ 0.03
LDLRAD3-201ENST00000315571 AEBP2Q6ZN18 517 aaPredicted RBP15.22■□□□□ 0.03
LDLRAD3-201ENST00000315571 STAC3Q96MF2 364 aa15.22■□□□□ 0.03
LDLRAD3-201ENST00000315571 NUTM2DQ5VT03 806 aaPredicted RBP15.2■□□□□ 0.02
LDLRAD3-201ENST00000315571 NEURL4Q96JN8 1562 aa15.2■□□□□ 0.02
LDLRAD3-201ENST00000315571 NBPF8Q3BBV2 869 aa15.2■□□□□ 0.02
LDLRAD3-201ENST00000315571 KDM4FA0A1W2PPD8 638 aa15.2■□□□□ 0.02
LDLRAD3-201ENST00000315571 L1TD1Q5T7N2 865 aaKnown RBP15.2■□□□□ 0.02
LDLRAD3-201ENST00000315571 TRIM44Q96DX7 344 aaPredicted RBP15.2■□□□□ 0.02
LDLRAD3-201ENST00000315571 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
LDLRAD3-201ENST00000315571 VGFO15240 615 aaPredicted RBP15.19■□□□□ 0.02
LDLRAD3-201ENST00000315571 A2ML1A8K2U0 1454 aa15.18■□□□□ 0.02
LDLRAD3-201ENST00000315571 HDGFP51858 240 aaKnown RBP15.18■□□□□ 0.02
LDLRAD3-201ENST00000315571 BBXQ8WY36 941 aaPredicted RBP15.17■□□□□ 0.02
LDLRAD3-201ENST00000315571 TMEM131LA2VDJ0 1609 aa15.17■□□□□ 0.02
LDLRAD3-201ENST00000315571 THEMISQ8N1K5 641 aaPredicted RBP15.17■□□□□ 0.02
LDLRAD3-201ENST00000315571 RRAGDQ9NQL2 400 aaPredicted RBP15.16■□□□□ 0.02
LDLRAD3-201ENST00000315571 UHRF1BP1Q6BDS2 1440 aa15.16■□□□□ 0.02
LDLRAD3-201ENST00000315571 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
LDLRAD3-201ENST00000315571 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
LDLRAD3-201ENST00000315571 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
LDLRAD3-201ENST00000315571 SENP3Q9H4L4 574 aaPredicted RBP15.16■□□□□ 0.02
LDLRAD3-201ENST00000315571 GZF1Q9H116 711 aaPredicted RBP15.15■□□□□ 0.02
LDLRAD3-201ENST00000315571 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 198.8 ms