RNA–Protein interactions for RNA: ENST00000315066.5

CNTD1-201, Transcript of cyclin N-terminal domain containing 1, humanhuman

TSL 1 (best)

Gene CNTD1, Length 2,657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-201ENST00000315066 SH3D19Q5HYK7 790 aa6.87□□□□□ -1.31
CNTD1-201ENST00000315066 KHSRPQ92945 711 aaKnown RBP eCLIP6.87□□□□□ -1.31
CNTD1-201ENST00000315066 TOP2AP11388 1531 aaKnown RBP6.87□□□□□ -1.31
CNTD1-201ENST00000315066 NLRP7Q8WX94 980 aa6.87□□□□□ -1.31
CNTD1-201ENST00000315066 THOC2Q8NI27 1593 aaKnown RBP6.87□□□□□ -1.31
CNTD1-201ENST00000315066 ADAM33Q9BZ11 813 aa6.86□□□□□ -1.31
CNTD1-201ENST00000315066 ADGRG1Q9Y653 693 aa6.86□□□□□ -1.31
CNTD1-201ENST00000315066 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
CNTD1-201ENST00000315066 PXYLP1Q8TE99 480 aa6.86□□□□□ -1.31
CNTD1-201ENST00000315066 ZSWIM6Q9HCJ5 1215 aa6.85□□□□□ -1.31
CNTD1-201ENST00000315066 FAM217BQ9NTX9 383 aaPredicted RBP6.85□□□□□ -1.31
CNTD1-201ENST00000315066 RBM27Q9P2N5 1060 aaKnown RBP6.85□□□□□ -1.31
CNTD1-201ENST00000315066 PRSS12P56730 875 aa6.85□□□□□ -1.31
CNTD1-201ENST00000315066 SKIV2LQ15477 1246 aaKnown RBP6.85□□□□□ -1.31
CNTD1-201ENST00000315066 CCDC88BA6NC98 1476 aa6.85□□□□□ -1.31
CNTD1-201ENST00000315066 FANCD2Q9BXW9 1451 aa6.85□□□□□ -1.31
CNTD1-201ENST00000315066 CDCA7LQ96GN5 454 aa6.84□□□□□ -1.31
CNTD1-201ENST00000315066 SCUBE2Q9NQ36 999 aa6.84□□□□□ -1.31
CNTD1-201ENST00000315066 POLR3EQ9NVU0 708 aa6.84□□□□□ -1.31
CNTD1-201ENST00000315066 CEP164Q9UPV0 1460 aa6.84□□□□□ -1.32
CNTD1-201ENST00000315066 PPP4R3BQ5MIZ7 849 aa6.83□□□□□ -1.32
CNTD1-201ENST00000315066 CFTRP13569 1480 aa6.83□□□□□ -1.32
CNTD1-201ENST00000315066 HOXB3P14651 431 aaPredicted RBP6.83□□□□□ -1.32
CNTD1-201ENST00000315066 GPR153Q6NV75 609 aa6.82□□□□□ -1.32
CNTD1-201ENST00000315066 LHX6Q9UPM6 363 aa6.82□□□□□ -1.32
CNTD1-201ENST00000315066 MRC2Q9UBG0 1479 aa6.82□□□□□ -1.32
CNTD1-201ENST00000315066 PSDA5PKW4 1024 aaPredicted RBP6.82□□□□□ -1.32
CNTD1-201ENST00000315066 UBTFP17480 764 aaKnown RBP6.82□□□□□ -1.32
CNTD1-201ENST00000315066 MAMSTRQ6ZN01 415 aa6.82□□□□□ -1.32
CNTD1-201ENST00000315066 TTC13Q8NBP0 860 aa6.82□□□□□ -1.32
CNTD1-201ENST00000315066 ARID3AQ99856 593 aa6.82□□□□□ -1.32
CNTD1-201ENST00000315066 PODXL2Q9NZ53 605 aa6.81□□□□□ -1.32
CNTD1-201ENST00000315066 DIXDC1Q155Q3 683 aa6.81□□□□□ -1.32
CNTD1-201ENST00000315066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.8□□□□□ -1.32
CNTD1-201ENST00000315066 PROCA1Q8NCQ7 364 aaPredicted RBP6.8□□□□□ -1.32
CNTD1-201ENST00000315066 PTPREP23469 700 aa6.8□□□□□ -1.32
CNTD1-201ENST00000315066 POTEJP0CG39 1038 aa6.79□□□□□ -1.32
CNTD1-201ENST00000315066 MYSM1Q5VVJ2 828 aa6.79□□□□□ -1.32
CNTD1-201ENST00000315066 URB2Q14146 1524 aaKnown RBP6.79□□□□□ -1.32
CNTD1-201ENST00000315066 APBB1O00213 710 aa6.79□□□□□ -1.32
CNTD1-201ENST00000315066 ONECUT3O60422 494 aaPredicted RBP6.79□□□□□ -1.32
CNTD1-201ENST00000315066 CLK2P49760 499 aaKnown RBP6.79□□□□□ -1.32
CNTD1-201ENST00000315066 TBC1D2Q9BYX2 928 aa6.79□□□□□ -1.32
CNTD1-201ENST00000315066 BCL2L12Q9HB09 334 aa6.79□□□□□ -1.32
CNTD1-201ENST00000315066 RCCD1A6NED2 376 aa6.78□□□□□ -1.32
CNTD1-201ENST00000315066 COL9A1P20849 921 aa6.78□□□□□ -1.32
CNTD1-201ENST00000315066 CLUAP1Q96AJ1 413 aa6.78□□□□□ -1.32
CNTD1-201ENST00000315066 WDR62O43379 1518 aa6.78□□□□□ -1.32
CNTD1-201ENST00000315066 ARID3CA6NKF2 412 aa6.78□□□□□ -1.32
CNTD1-201ENST00000315066 NBPF26B4DH59 902 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 PPP1R3GB7ZBB8 358 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 SNPHO15079 494 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 NEFLP07196 543 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 MCM6Q14566 821 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 NUDT18Q6ZVK8 323 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 RAD21O60216 631 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 PACS2Q86VP3 889 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 SULF1Q8IWU6 871 aa6.77□□□□□ -1.33
CNTD1-201ENST00000315066 POTEB2H3BUK9 544 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 NUTM1Q86Y26 1132 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 KCNH8Q96L42 1107 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 PNMA3Q9UL41 463 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 A6NJR5 290 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 FAM198AQ9UFP1 575 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 TSKSQ9UJT2 592 aa6.76□□□□□ -1.33
CNTD1-201ENST00000315066 WRNQ14191 1432 aaPredicted RBP eCLIP6.76□□□□□ -1.33
CNTD1-201ENST00000315066 DNAJB2P25686 324 aa6.75□□□□□ -1.33
CNTD1-201ENST00000315066 EYA1Q99502 592 aa6.75□□□□□ -1.33
CNTD1-201ENST00000315066 RIC3Q7Z5B4 369 aa6.74□□□□□ -1.33
CNTD1-201ENST00000315066 TATDN2Q93075 761 aa6.74□□□□□ -1.33
CNTD1-201ENST00000315066 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.74□□□□□ -1.33
CNTD1-201ENST00000315066 TRIM6-TRIM34B2RNG4 842 aa6.74□□□□□ -1.33
CNTD1-201ENST00000315066 TRAK2O60296 914 aa6.74□□□□□ -1.33
CNTD1-201ENST00000315066 SPIRE2Q8WWL2 714 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 ZNF608Q9ULD9 1512 aaPredicted RBP6.73□□□□□ -1.33
CNTD1-201ENST00000315066 CD46P15529 392 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 RDH13Q8NBN7 331 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 KCNK17Q96T54 332 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 C1orf115Q9H7X2 142 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 CDK11AQ9UQ88 783 aaPredicted RBP6.73□□□□□ -1.33
CNTD1-201ENST00000315066 RFC5P40937 340 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 CSPP1Q1MSJ5 1256 aa6.73□□□□□ -1.33
CNTD1-201ENST00000315066 HOXB1P14653 301 aaPredicted RBP6.72□□□□□ -1.33
CNTD1-201ENST00000315066 GLIPR1L2Q4G1C9 344 aa6.72□□□□□ -1.33
CNTD1-201ENST00000315066 LIMD1Q9UGP4 676 aa6.72□□□□□ -1.33
CNTD1-201ENST00000315066 TOPBP1Q92547 1522 aa6.72□□□□□ -1.33
CNTD1-201ENST00000315066 SPDYE5A6NIY4 337 aa6.72□□□□□ -1.33
CNTD1-201ENST00000315066 C11orf95C9JLR9 678 aaPredicted RBP6.72□□□□□ -1.33
CNTD1-201ENST00000315066 TMEM259Q4ZIN3 620 aa6.72□□□□□ -1.33
CNTD1-201ENST00000315066 RSPH4AQ5TD94 716 aa6.72□□□□□ -1.33
CNTD1-201ENST00000315066 PROSER2Q86WR7 435 aaPredicted RBP6.72□□□□□ -1.33
CNTD1-201ENST00000315066 NOP58Q9Y2X3 529 aaKnown RBP6.72□□□□□ -1.33
CNTD1-201ENST00000315066 PRDM2Q13029 1718 aa6.71□□□□□ -1.33
CNTD1-201ENST00000315066 SMAPO00193 183 aa6.71□□□□□ -1.34
CNTD1-201ENST00000315066 BANK1Q8NDB2 785 aa6.71□□□□□ -1.34
CNTD1-201ENST00000315066 TMEM134Q9H6X4 195 aa6.71□□□□□ -1.34
CNTD1-201ENST00000315066 ITGAEP38570 1179 aa6.71□□□□□ -1.34
CNTD1-201ENST00000315066 RTL5Q5HYW3 569 aaPredicted RBP6.71□□□□□ -1.34
CNTD1-201ENST00000315066 PROX2Q3B8N5 592 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms