RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 HMOX1P09601 288 aa7.87□□□□□ -1.15
PRKDC-201ENST00000314191 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
PRKDC-201ENST00000314191 CENPQQ7L2Z9 268 aaPredicted RBP7.86□□□□□ -1.15
PRKDC-201ENST00000314191 TCOF1Q13428 1488 aaKnown RBP7.86□□□□□ -1.15
PRKDC-201ENST00000314191 DISP1Q96F81 1524 aa7.86□□□□□ -1.15
PRKDC-201ENST00000314191 SUPT6HQ7KZ85 1726 aaKnown RBP7.86□□□□□ -1.15
PRKDC-201ENST00000314191 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
PRKDC-201ENST00000314191 CD109Q6YHK3 1445 aa7.86□□□□□ -1.15
PRKDC-201ENST00000314191 PANK1Q8TE04 598 aa7.86□□□□□ -1.15
PRKDC-201ENST00000314191 BCAR3O75815 825 aa7.86□□□□□ -1.15
PRKDC-201ENST00000314191 SLC4A10Q6U841 1118 aa7.85□□□□□ -1.15
PRKDC-201ENST00000314191 DHX29Q7Z478 1369 aaKnown RBP7.85□□□□□ -1.15
PRKDC-201ENST00000314191 SLC52A1Q9NWF4 448 aa7.85□□□□□ -1.15
PRKDC-201ENST00000314191 ZKSCAN2Q63HK3 967 aa7.85□□□□□ -1.15
PRKDC-201ENST00000314191 CABP1Q9NZU7 370 aa7.85□□□□□ -1.15
PRKDC-201ENST00000314191 NGEFQ8N5V2 710 aa7.85□□□□□ -1.15
PRKDC-201ENST00000314191 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
PRKDC-201ENST00000314191 MFAP1P55081 439 aaKnown RBP7.84□□□□□ -1.15
PRKDC-201ENST00000314191 IDI1Q13907 227 aa7.84□□□□□ -1.15
PRKDC-201ENST00000314191 DISP3Q9P2K9 1392 aa7.84□□□□□ -1.15
PRKDC-201ENST00000314191 CSB-PGBD3P0DP91 1061 aa7.84□□□□□ -1.15
PRKDC-201ENST00000314191 NCLP19338 710 aaKnown RBP7.84□□□□□ -1.15
PRKDC-201ENST00000314191 PLCH2O75038 1416 aa7.84□□□□□ -1.16
PRKDC-201ENST00000314191 ADGRL1O94910 1474 aa7.84□□□□□ -1.16
PRKDC-201ENST00000314191 OS9Q13438 667 aaPredicted RBP7.83□□□□□ -1.16
PRKDC-201ENST00000314191 SLC26A8Q96RN1 970 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 EXOSC9Q06265 439 aaKnown RBP7.83□□□□□ -1.16
PRKDC-201ENST00000314191 CASC1Q6TDU7 716 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 FAM161AQ3B820 660 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 CDK19Q9BWU1 502 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 NUP160Q12769 1436 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
PRKDC-201ENST00000314191 LMOD3Q0VAK6 560 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 NUTM2GQ5VZR2 741 aa7.83□□□□□ -1.16
PRKDC-201ENST00000314191 HSP90AB1P08238 724 aaKnown RBP7.82□□□□□ -1.16
PRKDC-201ENST00000314191 SLKQ9H2G2 1235 aaPredicted RBP7.82□□□□□ -1.16
PRKDC-201ENST00000314191 RPGRIP1LQ68CZ1 1315 aa7.82□□□□□ -1.16
PRKDC-201ENST00000314191 PRKAR2BP31323 418 aa7.82□□□□□ -1.16
PRKDC-201ENST00000314191 WAPLQ7Z5K2 1190 aa7.82□□□□□ -1.16
PRKDC-201ENST00000314191 STK31Q9BXU1 1019 aa7.82□□□□□ -1.16
PRKDC-201ENST00000314191 SMG6Q86US8 1419 aaKnown RBP7.81□□□□□ -1.16
PRKDC-201ENST00000314191 WDR62O43379 1518 aa7.81□□□□□ -1.16
PRKDC-201ENST00000314191 TSR2Q969E8 191 aaKnown RBP7.81□□□□□ -1.16
PRKDC-201ENST00000314191 ADAMTS12P58397 1594 aa7.81□□□□□ -1.16
PRKDC-201ENST00000314191 TPRNQ4KMQ1 711 aa7.81□□□□□ -1.16
PRKDC-201ENST00000314191 DEKP35659 375 aaKnown RBP7.8□□□□□ -1.16
PRKDC-201ENST00000314191 MAGI3Q5TCQ9 1506 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 ANP32BQ92688 251 aaKnown RBP7.8□□□□□ -1.16
PRKDC-201ENST00000314191 FANCIQ9NVI1 1328 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 SKAP1Q86WV1 359 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 FANCAO15360 1455 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 C20orf194Q5TEA3 1177 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 ANKRD45Q5TZF3 282 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 PZPP20742 1482 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 NECTIN2Q92692 538 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 C14orf93Q9H972 538 aaKnown RBP7.8□□□□□ -1.16
PRKDC-201ENST00000314191 SLFN5Q08AF3 891 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 HSCBQ8IWL3 235 aa7.8□□□□□ -1.16
PRKDC-201ENST00000314191 KIF14Q15058 1648 aa7.79□□□□□ -1.16
PRKDC-201ENST00000314191 TESK2Q96S53 571 aa7.79□□□□□ -1.16
PRKDC-201ENST00000314191 WWC1Q8IX03 1113 aa7.79□□□□□ -1.16
PRKDC-201ENST00000314191 DDX19BQ9UMR2 479 aa7.79□□□□□ -1.16
PRKDC-201ENST00000314191 NOS1P29475 1434 aa7.79□□□□□ -1.16
PRKDC-201ENST00000314191 NLRP6P59044 892 aa7.78□□□□□ -1.16
PRKDC-201ENST00000314191 KIAA0556O60303 1618 aa7.78□□□□□ -1.16
PRKDC-201ENST00000314191 CEBPAP49715 358 aaPredicted RBP7.78□□□□□ -1.16
PRKDC-201ENST00000314191 GNAI1P63096 354 aa7.78□□□□□ -1.16
PRKDC-201ENST00000314191 NSD3Q9BZ95 1437 aa7.78□□□□□ -1.16
PRKDC-201ENST00000314191 RTN4Q9NQC3 1192 aaKnown RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 GOLGA6L22H0YM25 854 aa7.77□□□□□ -1.17
PRKDC-201ENST00000314191 ZNF330Q9Y3S2 320 aaPredicted RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 NUDT16Q96DE0 195 aaKnown RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 EIF5BO60841 1220 aaKnown RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 PER1O15534 1290 aaPredicted RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 RRS1Q15050 365 aaKnown RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 FOXD4L1Q9NU39 408 aa7.77□□□□□ -1.17
PRKDC-201ENST00000314191 ASXL2Q76L83 1435 aa7.77□□□□□ -1.17
PRKDC-201ENST00000314191 EIF2S2P20042 333 aaKnown RBP7.77□□□□□ -1.17
PRKDC-201ENST00000314191 RAPGEF6Q8TEU7 1601 aa7.76□□□□□ -1.17
PRKDC-201ENST00000314191 LNPKQ9C0E8 428 aa7.76□□□□□ -1.17
PRKDC-201ENST00000314191 ZNF692Q9BU19 519 aaPredicted RBP7.76□□□□□ -1.17
PRKDC-201ENST00000314191 RTEL1-TNFRSF6BF6WH68 1400 aa7.76□□□□□ -1.17
PRKDC-201ENST00000314191 EMILIN1Q9Y6C2 1016 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 HMMRO75330 724 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 API5Q9BZZ5 524 aaKnown RBP7.75□□□□□ -1.17
PRKDC-201ENST00000314191 DENND4BO75064 1496 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-201ENST00000314191 PSME1Q06323 249 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 TEFQ10587 303 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 FBLN1P23142 703 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 KCNJ4P48050 445 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 THEMISQ8N1K5 641 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-201ENST00000314191 SCAF11Q99590 1463 aaKnown RBP7.75□□□□□ -1.17
PRKDC-201ENST00000314191 GZF1Q9H116 711 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-201ENST00000314191 PRAG1Q86YV5 1406 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 SYCP2Q9BX26 1530 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 SULT6B1Q6IMI4 303 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 ABCA5Q8WWZ7 1642 aa7.75□□□□□ -1.17
PRKDC-201ENST00000314191 THUMPD2Q9BTF0 503 aaKnown RBP7.75□□□□□ -1.17
PRKDC-201ENST00000314191 AMER1Q5JTC6 1135 aaPredicted RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms