RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 SCAPERQ9BY12 1400 aa23.4■■□□□ 1.34
CDK5R1-201ENST00000313401 NFKBIBQ15653 356 aa23.39■■□□□ 1.33
CDK5R1-201ENST00000313401 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
CDK5R1-201ENST00000313401 PMFBP1Q8TBY8 1022 aa23.38■■□□□ 1.33
CDK5R1-201ENST00000313401 CGNL1Q0VF96 1302 aa23.37■■□□□ 1.33
CDK5R1-201ENST00000313401 C14orf37Q86TY3 774 aa23.37■■□□□ 1.33
CDK5R1-201ENST00000313401 KIAA0556O60303 1618 aa23.36■■□□□ 1.33
CDK5R1-201ENST00000313401 SPATA31E1Q6ZUB1 1445 aa23.36■■□□□ 1.33
CDK5R1-201ENST00000313401 TPRNQ4KMQ1 711 aa23.36■■□□□ 1.33
CDK5R1-201ENST00000313401 IL27Q8NEV9 243 aa23.36■■□□□ 1.33
CDK5R1-201ENST00000313401 TESK2Q96S53 571 aa23.35■■□□□ 1.33
CDK5R1-201ENST00000313401 HDGFL2Q7Z4V5 671 aaPredicted RBP23.35■■□□□ 1.33
CDK5R1-201ENST00000313401 NCLP19338 710 aaKnown RBP23.35■■□□□ 1.33
CDK5R1-201ENST00000313401 FOXD4L1Q9NU39 408 aa23.35■■□□□ 1.33
CDK5R1-201ENST00000313401 GSE1Q14687 1217 aa23.34■■□□□ 1.33
CDK5R1-201ENST00000313401 HSP90AB1P08238 724 aaKnown RBP23.34■■□□□ 1.33
CDK5R1-201ENST00000313401 KIF14Q15058 1648 aa23.34■■□□□ 1.33
CDK5R1-201ENST00000313401 PER1O15534 1290 aaPredicted RBP23.33■■□□□ 1.33
CDK5R1-201ENST00000313401 RUNDC1Q96C34 613 aa23.33■■□□□ 1.33
CDK5R1-201ENST00000313401 RALGAPBQ86X10 1494 aa23.33■■□□□ 1.32
CDK5R1-201ENST00000313401 DUSP27Q5VZP5 1158 aa23.32■■□□□ 1.32
CDK5R1-201ENST00000313401 TSR2Q969E8 191 aaKnown RBP23.32■■□□□ 1.32
CDK5R1-201ENST00000313401 USP35Q9P2H5 1018 aa23.32■■□□□ 1.32
CDK5R1-201ENST00000313401 SLFN5Q08AF3 891 aa23.31■■□□□ 1.32
CDK5R1-201ENST00000313401 ADGRF5Q8IZF2 1346 aa23.31■■□□□ 1.32
CDK5R1-201ENST00000313401 HSCBQ8IWL3 235 aa23.31■■□□□ 1.32
CDK5R1-201ENST00000313401 DENND4BO75064 1496 aaPredicted RBP23.31■■□□□ 1.32
CDK5R1-201ENST00000313401 FRAT2O75474 233 aaPredicted RBP23.3■■□□□ 1.32
CDK5R1-201ENST00000313401 DNMT1P26358 1616 aaKnown RBP23.3■■□□□ 1.32
CDK5R1-201ENST00000313401 EVC2Q86UK5 1308 aa23.3■■□□□ 1.32
CDK5R1-201ENST00000313401 TERF2IPQ9NYB0 399 aa23.3■■□□□ 1.32
CDK5R1-201ENST00000313401 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
CDK5R1-201ENST00000313401 ANP32BQ92688 251 aaKnown RBP23.28■■□□□ 1.32
CDK5R1-201ENST00000313401 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
CDK5R1-201ENST00000313401 IPO8O15397 1037 aaKnown RBP23.27■■□□□ 1.32
CDK5R1-201ENST00000313401 PRAG1Q86YV5 1406 aa23.26■■□□□ 1.31
CDK5R1-201ENST00000313401 RIPK4P57078 832 aa23.26■■□□□ 1.31
CDK5R1-201ENST00000313401 BRPF3Q9ULD4 1205 aa23.25■■□□□ 1.31
CDK5R1-201ENST00000313401 DZIP1LQ8IYY4 767 aaKnown RBP23.25■■□□□ 1.31
CDK5R1-201ENST00000313401 PARD3Q8TEW0 1356 aa23.25■■□□□ 1.31
CDK5R1-201ENST00000313401 HMOX1P09601 288 aa23.24■■□□□ 1.31
CDK5R1-201ENST00000313401 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
CDK5R1-201ENST00000313401 AMER1Q5JTC6 1135 aaPredicted RBP23.23■■□□□ 1.31
CDK5R1-201ENST00000313401 RAPGEF3O95398 923 aa23.22■■□□□ 1.31
CDK5R1-201ENST00000313401 PNNQ9H307 717 aaKnown RBP23.22■■□□□ 1.31
CDK5R1-201ENST00000313401 EXOSC9Q06265 439 aaKnown RBP23.21■■□□□ 1.31
CDK5R1-201ENST00000313401 GCC2Q8IWJ2 1684 aa23.21■■□□□ 1.31
CDK5R1-201ENST00000313401 TARBP1Q13395 1621 aaKnown RBP23.21■■□□□ 1.31
CDK5R1-201ENST00000313401 PDZRN3Q9UPQ7 1066 aa23.21■■□□□ 1.31
CDK5R1-201ENST00000313401 LNPKQ9C0E8 428 aa23.2■■□□□ 1.31
CDK5R1-201ENST00000313401 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
CDK5R1-201ENST00000313401 FAM135AQ9P2D6 1515 aa23.19■■□□□ 1.3
CDK5R1-201ENST00000313401 ANKRD45Q5TZF3 282 aa23.19■■□□□ 1.3
CDK5R1-201ENST00000313401 SYCP2Q9BX26 1530 aa23.19■■□□□ 1.3
CDK5R1-201ENST00000313401 TRIM44Q96DX7 344 aaPredicted RBP23.19■■□□□ 1.3
CDK5R1-201ENST00000313401 STAC3Q96MF2 364 aa23.19■■□□□ 1.3
CDK5R1-201ENST00000313401 PBRM1Q86U86 1689 aa23.18■■□□□ 1.3
CDK5R1-201ENST00000313401 PLEKHH1Q9ULM0 1364 aa23.18■■□□□ 1.3
CDK5R1-201ENST00000313401 LRPPRCP42704 1394 aaKnown RBP23.17■■□□□ 1.3
CDK5R1-201ENST00000313401 DIAPH1O60610 1272 aaKnown RBP23.17■■□□□ 1.3
CDK5R1-201ENST00000313401 IGHDP01880 384 aa23.16■■□□□ 1.3
CDK5R1-201ENST00000313401 CYB5RLQ6IPT4 315 aa23.15■■□□□ 1.3
CDK5R1-201ENST00000313401 KDM5BQ9UGL1 1544 aa23.15■■□□□ 1.3
CDK5R1-201ENST00000313401 GOLGA6L22H0YM25 854 aa23.14■■□□□ 1.3
CDK5R1-201ENST00000313401 PDE3AQ14432 1141 aa23.14■■□□□ 1.3
CDK5R1-201ENST00000313401 RNF123Q5XPI4 1314 aa23.14■■□□□ 1.3
CDK5R1-201ENST00000313401 NSD3Q9BZ95 1437 aa23.14■■□□□ 1.29
CDK5R1-201ENST00000313401 NAP1L5Q96NT1 182 aaPredicted RBP23.14■■□□□ 1.29
CDK5R1-201ENST00000313401 EIF4G3O43432 1585 aaKnown RBP23.13■■□□□ 1.29
CDK5R1-201ENST00000313401 ITSN2Q9NZM3 1697 aa23.13■■□□□ 1.29
CDK5R1-201ENST00000313401 TNNQ9UQP3 1299 aa23.12■■□□□ 1.29
CDK5R1-201ENST00000313401 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
CDK5R1-201ENST00000313401 SLC4A10Q6U841 1118 aa23.12■■□□□ 1.29
CDK5R1-201ENST00000313401 C1orf115Q9H7X2 142 aa23.11■■□□□ 1.29
CDK5R1-201ENST00000313401 DMRT2Q9Y5R5 561 aa23.1■■□□□ 1.29
CDK5R1-201ENST00000313401 UHRF1BP1Q6BDS2 1440 aa23.1■■□□□ 1.29
CDK5R1-201ENST00000313401 NGEFQ8N5V2 710 aa23.1■■□□□ 1.29
CDK5R1-201ENST00000313401 TRAPPC8Q9Y2L5 1435 aa23.1■■□□□ 1.29
CDK5R1-201ENST00000313401 DDX19BQ9UMR2 479 aa23.09■■□□□ 1.29
CDK5R1-201ENST00000313401 A2MP01023 1474 aa23.09■■□□□ 1.29
CDK5R1-201ENST00000313401 CARD14Q9BXL6 1004 aa23.09■■□□□ 1.29
CDK5R1-201ENST00000313401 LMOD2Q6P5Q4 547 aa23.08■■□□□ 1.29
CDK5R1-201ENST00000313401 ADGRL2O95490 1459 aa23.07■■□□□ 1.28
CDK5R1-201ENST00000313401 FBLN1P23142 703 aa23.07■■□□□ 1.28
CDK5R1-201ENST00000313401 RARSP54136 660 aaKnown RBP23.07■■□□□ 1.28
CDK5R1-201ENST00000313401 C22orf23Q9BZE7 217 aa23.06■■□□□ 1.28
CDK5R1-201ENST00000313401 NOB1Q9ULX3 412 aaKnown RBP23.06■■□□□ 1.28
CDK5R1-201ENST00000313401 THUMPD2Q9BTF0 503 aaKnown RBP23.06■■□□□ 1.28
CDK5R1-201ENST00000313401 CHMP4BQ9H444 224 aaKnown RBP23.06■■□□□ 1.28
CDK5R1-201ENST00000313401 PRKAR2BP31323 418 aa23.06■■□□□ 1.28
CDK5R1-201ENST00000313401 L1TD1Q5T7N2 865 aaKnown RBP23.06■■□□□ 1.28
CDK5R1-201ENST00000313401 CABP1Q9NZU7 370 aa23.05■■□□□ 1.28
CDK5R1-201ENST00000313401 CASC1Q6TDU7 716 aa23.05■■□□□ 1.28
CDK5R1-201ENST00000313401 GOLGA6L3A6NEY3 463 aa23.04■■□□□ 1.28
CDK5R1-201ENST00000313401 SCAF11Q99590 1463 aaKnown RBP23.04■■□□□ 1.28
CDK5R1-201ENST00000313401 LRRIQ1Q96JM4 1722 aa23.04■■□□□ 1.28
CDK5R1-201ENST00000313401 NOL8Q76FK4 1167 aaKnown RBP23.04■■□□□ 1.28
CDK5R1-201ENST00000313401 OSCARQ8IYS5 282 aa23.04■■□□□ 1.28
CDK5R1-201ENST00000313401 FOXD4L5Q5VV16 416 aaPredicted RBP23.03■■□□□ 1.28
CDK5R1-201ENST00000313401 FOXD4L4Q8WXT5 416 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms