RNA–Protein interactions for RNA: ENST00000313050.11

SEC16A-203, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SEC16A, Length 8,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-203ENST00000313050 DHX37Q8IY37 1157 aaKnown RBP12.72□□□□□ -0.37
SEC16A-203ENST00000313050 IQCEQ6IPM2 695 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 CEP63Q96MT8 703 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 STK31Q9BXU1 1019 aa12.72□□□□□ -0.37
SEC16A-203ENST00000313050 LUZP1Q86V48 1076 aa12.71□□□□□ -0.37
SEC16A-203ENST00000313050 MARCH6O60337 910 aa12.71□□□□□ -0.37
SEC16A-203ENST00000313050 CCDC112Q8NEF3 446 aa12.71□□□□□ -0.37
SEC16A-203ENST00000313050 CCDC9Q9Y3X0 531 aaKnown RBP12.71□□□□□ -0.37
SEC16A-203ENST00000313050 MCTP1Q6DN14 999 aa12.71□□□□□ -0.37
SEC16A-203ENST00000313050 BICD2Q8TD16 824 aa12.71□□□□□ -0.38
SEC16A-203ENST00000313050 WDR66Q8TBY9 1149 aa12.71□□□□□ -0.38
SEC16A-203ENST00000313050 TDO2P48775 406 aa12.7□□□□□ -0.38
SEC16A-203ENST00000313050 KIAA1328Q86T90 577 aa12.7□□□□□ -0.38
SEC16A-203ENST00000313050 SWAP70Q9UH65 585 aa12.7□□□□□ -0.38
SEC16A-203ENST00000313050 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
SEC16A-203ENST00000313050 PRDM10Q9NQV6 1147 aa12.7□□□□□ -0.38
SEC16A-203ENST00000313050 CHMP3Q9Y3E7 222 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 GBP2P32456 591 aaPredicted RBP12.69□□□□□ -0.38
SEC16A-203ENST00000313050 MICALCLQ6ZW33 695 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 SMARCE1Q969G3 411 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 EPS15P42566 896 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 OLFM4Q6UX06 510 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 PPM1EQ8WY54 764 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 VPS53Q5VIR6 699 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 WWC1Q8IX03 1113 aa12.69□□□□□ -0.38
SEC16A-203ENST00000313050 SUDS3Q9H7L9 328 aaPredicted RBP12.69□□□□□ -0.38
SEC16A-203ENST00000313050 ZHX1Q9UKY1 873 aaPredicted RBP12.68□□□□□ -0.38
SEC16A-203ENST00000313050 PDILTQ8N807 584 aa12.68□□□□□ -0.38
SEC16A-203ENST00000313050 MNAT1P51948 309 aa12.68□□□□□ -0.38
SEC16A-203ENST00000313050 TRIM5Q9C035 493 aa12.68□□□□□ -0.38
SEC16A-203ENST00000313050 KTN1Q86UP2 1357 aaKnown RBP12.68□□□□□ -0.38
SEC16A-203ENST00000313050 TMCO3Q6UWJ1 677 aa12.68□□□□□ -0.38
SEC16A-203ENST00000313050 AKAP17AQ02040 695 aaKnown RBP12.67□□□□□ -0.38
SEC16A-203ENST00000313050 FAM114A1Q8IWE2 563 aa12.67□□□□□ -0.38
SEC16A-203ENST00000313050 ANKRD62A6NC57 917 aa12.67□□□□□ -0.38
SEC16A-203ENST00000313050 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
SEC16A-203ENST00000313050 REC8O95072 547 aa12.66□□□□□ -0.38
SEC16A-203ENST00000313050 CTR9Q6PD62 1173 aa12.66□□□□□ -0.38
SEC16A-203ENST00000313050 CCDC102AQ96A19 550 aa12.66□□□□□ -0.38
SEC16A-203ENST00000313050 FYB1O15117 783 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 CCDC175P0C221 793 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 TSPY4P0CV99 314 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 TSPY10P0CW01 314 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 SARNPP82979 210 aaKnown RBP12.65□□□□□ -0.38
SEC16A-203ENST00000313050 MTUS2Q5JR59 1369 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 DNAAF4Q8WXU2 420 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 TRIM29Q14134 588 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 DAAM2Q86T65 1068 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 CBX1P83916 185 aa12.65□□□□□ -0.38
SEC16A-203ENST00000313050 TSPY26PQ9H489 355 aa12.65□□□□□ -0.39
SEC16A-203ENST00000313050 TAX1BP1Q86VP1 789 aa12.64□□□□□ -0.39
SEC16A-203ENST00000313050 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
SEC16A-203ENST00000313050 POLR3GO15318 223 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-203ENST00000313050 MAP2K1Q02750 393 aaPredicted RBP12.64□□□□□ -0.39
SEC16A-203ENST00000313050 CCDC73Q6ZRK6 1079 aa12.64□□□□□ -0.39
SEC16A-203ENST00000313050 OFD1O75665 1012 aa12.64□□□□□ -0.39
SEC16A-203ENST00000313050 TRAK2O60296 914 aa12.64□□□□□ -0.39
SEC16A-203ENST00000313050 PHLDB1Q86UU1 1377 aa12.63□□□□□ -0.39
SEC16A-203ENST00000313050 CCDC91Q7Z6B0 441 aa12.63□□□□□ -0.39
SEC16A-203ENST00000313050 TXLNBQ8N3L3 684 aa12.63□□□□□ -0.39
SEC16A-203ENST00000313050 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
SEC16A-203ENST00000313050 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
SEC16A-203ENST00000313050 TMX4Q9H1E5 349 aaPredicted RBP12.62□□□□□ -0.39
SEC16A-203ENST00000313050 PAXIP1Q6ZW49 1069 aaPredicted RBP12.62□□□□□ -0.39
SEC16A-203ENST00000313050 RBM28Q9NW13 759 aaKnown RBP12.62□□□□□ -0.39
SEC16A-203ENST00000313050 MBD3O95983 291 aa12.62□□□□□ -0.39
SEC16A-203ENST00000313050 FAM193AP78312 1265 aa12.62□□□□□ -0.39
SEC16A-203ENST00000313050 MAP9Q49MG5 647 aa12.62□□□□□ -0.39
SEC16A-203ENST00000313050 LMOD3Q0VAK6 560 aa12.62□□□□□ -0.39
SEC16A-203ENST00000313050 KRI1Q8N9T8 703 aaKnown RBP12.62□□□□□ -0.39
SEC16A-203ENST00000313050 SENP3Q9H4L4 574 aaPredicted RBP12.62□□□□□ -0.39
SEC16A-203ENST00000313050 LUC7LQ9NQ29 371 aaKnown RBP12.62□□□□□ -0.39
SEC16A-203ENST00000313050 ESPNB1AK53 854 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 ZFYVE27Q5T4F4 411 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 TCEAL9Q9UHQ7 104 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 SMC2O95347 1197 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 CPLX2Q6PUV4 134 aaKnown RBP12.61□□□□□ -0.39
SEC16A-203ENST00000313050 FBXW7Q969H0 707 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 MCM3P25205 808 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 CCDC181Q5TID7 509 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 SMC4Q9NTJ3 1288 aa12.61□□□□□ -0.39
SEC16A-203ENST00000313050 STAMBPO95630 424 aa12.6□□□□□ -0.39
SEC16A-203ENST00000313050 CRACR2AQ9BSW2 395 aa12.6□□□□□ -0.39
SEC16A-203ENST00000313050 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
SEC16A-203ENST00000313050 GBP3Q9H0R5 595 aa12.6□□□□□ -0.39
SEC16A-203ENST00000313050 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
SEC16A-203ENST00000313050 PPP1R15AO75807 674 aaPredicted RBP12.59□□□□□ -0.39
SEC16A-203ENST00000313050 KIF3CO14782 793 aa12.59□□□□□ -0.39
SEC16A-203ENST00000313050 FEZ1Q99689 392 aa12.59□□□□□ -0.39
SEC16A-203ENST00000313050 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
SEC16A-203ENST00000313050 TMF1P82094 1093 aa12.59□□□□□ -0.39
SEC16A-203ENST00000313050 RNF214Q8ND24 703 aa12.59□□□□□ -0.39
SEC16A-203ENST00000313050 IBSPP21815 317 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-203ENST00000313050 SYNE3Q6ZMZ3 975 aa12.58□□□□□ -0.4
SEC16A-203ENST00000313050 PABPN1Q86U42 306 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC16A-203ENST00000313050 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
SEC16A-203ENST00000313050 TCHPQ9BT92 498 aa12.58□□□□□ -0.4
SEC16A-203ENST00000313050 CENPJQ9HC77 1338 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-203ENST00000313050 LIG1P18858 919 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms