RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
CLCN6-201ENST00000312413 SASS6Q6UVJ0 657 aa16.67■□□□□ 0.26
CLCN6-201ENST00000312413 TRIM29Q14134 588 aa16.67■□□□□ 0.26
CLCN6-201ENST00000312413 ACBD3Q9H3P7 528 aa16.67■□□□□ 0.26
CLCN6-201ENST00000312413 DZIP1LQ8IYY4 767 aaKnown RBP16.67■□□□□ 0.26
CLCN6-201ENST00000312413 PCMTD1Q96MG8 357 aaPredicted RBP16.66■□□□□ 0.26
CLCN6-201ENST00000312413 LRRFIP1Q32MZ4 808 aaKnown RBP16.66■□□□□ 0.26
CLCN6-201ENST00000312413 ANO2Q9NQ90 1003 aa16.66■□□□□ 0.26
CLCN6-201ENST00000312413 HOOK1Q9UJC3 728 aaKnown RBP16.66■□□□□ 0.26
CLCN6-201ENST00000312413 CCDC39Q9UFE4 941 aa16.66■□□□□ 0.26
CLCN6-201ENST00000312413 NASPP49321 788 aaPredicted RBP16.66■□□□□ 0.26
CLCN6-201ENST00000312413 C22orf23Q9BZE7 217 aa16.66■□□□□ 0.26
CLCN6-201ENST00000312413 KIF3BO15066 747 aa16.65■□□□□ 0.26
CLCN6-201ENST00000312413 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
CLCN6-201ENST00000312413 CARMIL2Q6F5E8 1435 aa16.65■□□□□ 0.26
CLCN6-201ENST00000312413 CECR2Q9BXF3 1484 aa16.65■□□□□ 0.26
CLCN6-201ENST00000312413 VPS37CA5D8V6 355 aaPredicted RBP16.64■□□□□ 0.26
CLCN6-201ENST00000312413 HSP90B2PQ58FF3 399 aa16.64■□□□□ 0.26
CLCN6-201ENST00000312413 CCDC47Q96A33 483 aaKnown RBP16.64■□□□□ 0.26
CLCN6-201ENST00000312413 SMC3Q9UQE7 1217 aa16.64■□□□□ 0.26
CLCN6-201ENST00000312413 CPLX1O14810 134 aa16.64■□□□□ 0.25
CLCN6-201ENST00000312413 INTS3Q68E01 1043 aaKnown RBP16.64■□□□□ 0.25
CLCN6-201ENST00000312413 CCDC9Q9Y3X0 531 aaKnown RBP16.64■□□□□ 0.25
CLCN6-201ENST00000312413 RNF20Q5VTR2 975 aa16.64■□□□□ 0.25
CLCN6-201ENST00000312413 API5Q9BZZ5 524 aaKnown RBP16.64■□□□□ 0.25
CLCN6-201ENST00000312413 TRAK1Q9UPV9 953 aa16.64■□□□□ 0.25
CLCN6-201ENST00000312413 LTV1Q96GA3 475 aaPredicted RBP16.64■□□□□ 0.25
CLCN6-201ENST00000312413 RUFY1Q96T51 708 aa16.64■□□□□ 0.25
CLCN6-201ENST00000312413 CDR1P51861 262 aa16.63■□□□□ 0.25
CLCN6-201ENST00000312413 AK7Q96M32 723 aa16.63■□□□□ 0.25
CLCN6-201ENST00000312413 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
CLCN6-201ENST00000312413 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
CLCN6-201ENST00000312413 USP47Q96K76 1375 aa16.61■□□□□ 0.25
CLCN6-201ENST00000312413 RRP12Q5JTH9 1297 aaKnown RBP16.6■□□□□ 0.25
CLCN6-201ENST00000312413 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
CLCN6-201ENST00000312413 AAMPQ13685 434 aa16.6■□□□□ 0.25
CLCN6-201ENST00000312413 G3V3G9 751 aa16.6■□□□□ 0.25
CLCN6-201ENST00000312413 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
CLCN6-201ENST00000312413 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
CLCN6-201ENST00000312413 HNRNPMP52272 730 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLCN6-201ENST00000312413 ROCK1Q13464 1354 aa16.59■□□□□ 0.25
CLCN6-201ENST00000312413 GTF2E1P29083 439 aaPredicted RBP16.59■□□□□ 0.25
CLCN6-201ENST00000312413 CCDC144AA2RUR9 1427 aa16.59■□□□□ 0.25
CLCN6-201ENST00000312413 CCDC66A2RUB6 948 aa16.59■□□□□ 0.25
CLCN6-201ENST00000312413 TRAK2O60296 914 aa16.59■□□□□ 0.25
CLCN6-201ENST00000312413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.58■□□□□ 0.25
CLCN6-201ENST00000312413 NUTM2DQ5VT03 806 aaPredicted RBP16.58■□□□□ 0.25
CLCN6-201ENST00000312413 C9orf78Q9NZ63 289 aaPredicted RBP16.58■□□□□ 0.25
CLCN6-201ENST00000312413 CWC15Q9P013 229 aaKnown RBP16.58■□□□□ 0.25
CLCN6-201ENST00000312413 NEXNQ0ZGT2 675 aa16.58■□□□□ 0.24
CLCN6-201ENST00000312413 LNPKQ9C0E8 428 aa16.58■□□□□ 0.24
CLCN6-201ENST00000312413 ANO8Q9HCE9 1232 aaPredicted RBP16.58■□□□□ 0.24
CLCN6-201ENST00000312413 ABCC8Q09428 1581 aa16.57■□□□□ 0.24
CLCN6-201ENST00000312413 RNF214Q8ND24 703 aa16.57■□□□□ 0.24
CLCN6-201ENST00000312413 COG3Q96JB2 828 aa16.56■□□□□ 0.24
CLCN6-201ENST00000312413 TRDNQ13061 729 aa16.56■□□□□ 0.24
CLCN6-201ENST00000312413 FBXW7Q969H0 707 aa16.56■□□□□ 0.24
CLCN6-201ENST00000312413 NAT10Q9H0A0 1025 aaKnown RBP16.56■□□□□ 0.24
CLCN6-201ENST00000312413 BRPF3Q9ULD4 1205 aa16.56■□□□□ 0.24
CLCN6-201ENST00000312413 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
CLCN6-201ENST00000312413 TEFQ10587 303 aa16.55■□□□□ 0.24
CLCN6-201ENST00000312413 MBD3O95983 291 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
CLCN6-201ENST00000312413 WWC1Q8IX03 1113 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 CDC45O75419 566 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 EVC2Q86UK5 1308 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 RIPK4P57078 832 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 WASHC2CQ9Y4E1 1318 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 APPP05067 770 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 C1orf141Q5JVX7 400 aa16.54■□□□□ 0.24
CLCN6-201ENST00000312413 ERCC4Q92889 916 aaPredicted RBP16.53■□□□□ 0.24
CLCN6-201ENST00000312413 H0YHG0 523 aa16.53■□□□□ 0.24
CLCN6-201ENST00000312413 LETM1O95202 739 aaPredicted RBP16.53■□□□□ 0.24
CLCN6-201ENST00000312413 PKNOX2Q96KN3 472 aa16.53■□□□□ 0.24
CLCN6-201ENST00000312413 DIAPH1O60610 1272 aaKnown RBP16.53■□□□□ 0.24
CLCN6-201ENST00000312413 EID1Q9Y6B2 187 aa16.52■□□□□ 0.24
CLCN6-201ENST00000312413 NUTM2FA1L443 756 aa16.52■□□□□ 0.24
CLCN6-201ENST00000312413 NAP1L1P55209 391 aaKnown RBP16.52■□□□□ 0.24
CLCN6-201ENST00000312413 CAVIN1Q6NZI2 390 aaKnown RBP16.52■□□□□ 0.24
CLCN6-201ENST00000312413 UACAQ9BZF9 1416 aa16.52■□□□□ 0.24
CLCN6-201ENST00000312413 CCDC173Q0VFZ6 552 aa16.52■□□□□ 0.24
CLCN6-201ENST00000312413 RUNDC1Q96C34 613 aa16.52■□□□□ 0.24
CLCN6-201ENST00000312413 EIF2S2P20042 333 aaKnown RBP16.52■□□□□ 0.23
CLCN6-201ENST00000312413 G3BP1Q13283 466 aaKnown RBP eCLIP16.52■□□□□ 0.23
CLCN6-201ENST00000312413 HSP90AB4PQ58FF6 505 aa16.52■□□□□ 0.23
CLCN6-201ENST00000312413 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.23
CLCN6-201ENST00000312413 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLCN6-201ENST00000312413 ERC2O15083 957 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 SDF4Q9BRK5 362 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.51■□□□□ 0.23
CLCN6-201ENST00000312413 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 TRIM5Q9C035 493 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 BCL11BQ9C0K0 894 aaPredicted RBP16.51■□□□□ 0.23
CLCN6-201ENST00000312413 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 OLFM4Q6UX06 510 aa16.51■□□□□ 0.23
CLCN6-201ENST00000312413 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
CLCN6-201ENST00000312413 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
CLCN6-201ENST00000312413 FKBP5Q13451 457 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms