RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 IQGAP1P46940 1657 aa33.47■■■□□ 2.95
HOXB3-201ENST00000311626 RTEL1-TNFRSF6BF6WH68 1400 aa33.46■■■□□ 2.95
HOXB3-201ENST00000311626 ADGRF5Q8IZF2 1346 aa33.46■■■□□ 2.95
HOXB3-201ENST00000311626 SPHKAPQ2M3C7 1700 aa33.46■■■□□ 2.95
HOXB3-201ENST00000311626 ZMYM4Q5VZL5 1548 aa33.45■■■□□ 2.95
HOXB3-201ENST00000311626 FANCAO15360 1455 aa33.45■■■□□ 2.94
HOXB3-201ENST00000311626 KANK1Q14678 1352 aa33.44■■■□□ 2.94
HOXB3-201ENST00000311626 PDE4AP27815 886 aa33.44■■■□□ 2.94
HOXB3-201ENST00000311626 CDCA8Q53HL2 280 aa33.43■■■□□ 2.94
HOXB3-201ENST00000311626 ZBTB47Q9UFB7 747 aaPredicted RBP33.43■■■□□ 2.94
HOXB3-201ENST00000311626 TCERG1O14776 1098 aaKnown RBP33.42■■■□□ 2.94
HOXB3-201ENST00000311626 CEP152O94986 1710 aa33.41■■■□□ 2.94
HOXB3-201ENST00000311626 CHGAP10645 457 aaKnown RBP33.4■■■□□ 2.94
HOXB3-201ENST00000311626 ATP7AQ04656 1500 aa33.4■■■□□ 2.94
HOXB3-201ENST00000311626 DUSP27Q5VZP5 1158 aa33.39■■■□□ 2.94
HOXB3-201ENST00000311626 INSRP06213 1382 aa33.36■■■□□ 2.93
HOXB3-201ENST00000311626 ADGRL1O94910 1474 aa33.35■■■□□ 2.93
HOXB3-201ENST00000311626 ASXL1Q8IXJ9 1541 aa33.35■■■□□ 2.93
HOXB3-201ENST00000311626 TET3O43151 1660 aa33.34■■■□□ 2.93
HOXB3-201ENST00000311626 CARD14Q9BXL6 1004 aa33.33■■■□□ 2.93
HOXB3-201ENST00000311626 SPINK5Q9NQ38 1064 aaPredicted RBP33.33■■■□□ 2.93
HOXB3-201ENST00000311626 GOLGA2Q08379 1002 aa33.33■■■□□ 2.93
HOXB3-201ENST00000311626 BACH2Q9BYV9 841 aa33.33■■■□□ 2.93
HOXB3-201ENST00000311626 DEPDC5O75140 1603 aa33.33■■■□□ 2.93
HOXB3-201ENST00000311626 APAF1O14727 1248 aa33.32■■■□□ 2.93
HOXB3-201ENST00000311626 SYNMO15061 1565 aa33.32■■■□□ 2.92
HOXB3-201ENST00000311626 EIF3AQ14152 1382 aaKnown RBP33.31■■■□□ 2.92
HOXB3-201ENST00000311626 DEKP35659 375 aaKnown RBP33.3■■■□□ 2.92
HOXB3-201ENST00000311626 MYOM1P52179 1685 aa33.29■■■□□ 2.92
HOXB3-201ENST00000311626 ZNF521Q96K83 1311 aa33.29■■■□□ 2.92
HOXB3-201ENST00000311626 STAC3Q96MF2 364 aa33.28■■■□□ 2.92
HOXB3-201ENST00000311626 INO80Q9ULG1 1556 aaPredicted RBP33.28■■■□□ 2.92
HOXB3-201ENST00000311626 ARAP3Q8WWN8 1544 aa33.26■■■□□ 2.92
HOXB3-201ENST00000311626 TNNT2P45379 298 aaPredicted RBP33.26■■■□□ 2.91
HOXB3-201ENST00000311626 VWDEQ8N2E2 1590 aa33.24■■■□□ 2.91
HOXB3-201ENST00000311626 ERVK-7P63135 1459 aa33.24■■■□□ 2.91
HOXB3-201ENST00000311626 ABCA9Q8IUA7 1624 aa33.24■■■□□ 2.91
HOXB3-201ENST00000311626 SLFN5Q08AF3 891 aa33.24■■■□□ 2.91
HOXB3-201ENST00000311626 TRAK1Q9UPV9 953 aa33.24■■■□□ 2.91
HOXB3-201ENST00000311626 DMRT2Q9Y5R5 561 aa33.24■■■□□ 2.91
HOXB3-201ENST00000311626 SENP3Q9H4L4 574 aaPredicted RBP33.23■■■□□ 2.91
HOXB3-201ENST00000311626 MROH1Q8NDA8 1641 aa33.22■■■□□ 2.91
HOXB3-201ENST00000311626 PIK3C2GO75747 1445 aa33.22■■■□□ 2.91
HOXB3-201ENST00000311626 GGT6Q6P531 493 aa33.22■■■□□ 2.91
HOXB3-201ENST00000311626 ABCA6Q8N139 1617 aa33.22■■■□□ 2.91
HOXB3-201ENST00000311626 ASXL2Q76L83 1435 aa33.22■■■□□ 2.91
HOXB3-201ENST00000311626 MS4A1P11836 297 aa33.21■■■□□ 2.91
HOXB3-201ENST00000311626 CFAP65Q6ZU64 1925 aaKnown RBP33.21■■■□□ 2.91
HOXB3-201ENST00000311626 TMEM132EQ6IEE7 984 aa33.2■■■□□ 2.91
HOXB3-201ENST00000311626 KDM5AP29375 1690 aaKnown RBP33.19■■■□□ 2.9
HOXB3-201ENST00000311626 NUTM2DQ5VT03 806 aaPredicted RBP33.19■■■□□ 2.9
HOXB3-201ENST00000311626 BCAR3O75815 825 aa33.19■■■□□ 2.9
HOXB3-201ENST00000311626 LAS1LQ9Y4W2 734 aaKnown RBP33.18■■■□□ 2.9
HOXB3-201ENST00000311626 MAP3K4Q9Y6R4 1608 aa33.18■■■□□ 2.9
HOXB3-201ENST00000311626 NOS1P29475 1434 aa33.17■■■□□ 2.9
HOXB3-201ENST00000311626 KDM2BQ8NHM5 1336 aa33.14■■■□□ 2.9
HOXB3-201ENST00000311626 MROH2AA6NES4 1674 aa33.14■■■□□ 2.9
HOXB3-201ENST00000311626 SLC12A5Q9H2X9 1139 aa33.14■■■□□ 2.9
HOXB3-201ENST00000311626 NPC1L1Q9UHC9 1359 aa33.13■■■□□ 2.89
HOXB3-201ENST00000311626 NEUROD2Q15784 382 aa33.13■■■□□ 2.89
HOXB3-201ENST00000311626 PPRC1Q5VV67 1664 aaKnown RBP33.11■■■□□ 2.89
HOXB3-201ENST00000311626 KIF1BO60333 1816 aa33.11■■■□□ 2.89
HOXB3-201ENST00000311626 CENPJQ9HC77 1338 aaPredicted RBP33.1■■■□□ 2.89
HOXB3-201ENST00000311626 EFCAB6Q5THR3 1501 aa33.1■■■□□ 2.89
HOXB3-201ENST00000311626 MYOM2P54296 1465 aa33.1■■■□□ 2.89
HOXB3-201ENST00000311626 TRMT2AQ8IZ69 625 aaKnown RBP33.1■■■□□ 2.89
HOXB3-201ENST00000311626 KIDINS220Q9ULH0 1771 aa33.1■■■□□ 2.89
HOXB3-201ENST00000311626 KIAA1210Q9ULL0 1709 aa33.09■■■□□ 2.89
HOXB3-201ENST00000311626 RRP7AQ9Y3A4 280 aaKnown RBP33.09■■■□□ 2.89
HOXB3-201ENST00000311626 GOLGA6L2Q8N9W4 650 aaPredicted RBP33.08■■■□□ 2.89
HOXB3-201ENST00000311626 RGS3P49796 1198 aa33.07■■■□□ 2.88
HOXB3-201ENST00000311626 RTL5Q5HYW3 569 aaPredicted RBP33.05■■■□□ 2.88
HOXB3-201ENST00000311626 CENPQQ7L2Z9 268 aaPredicted RBP33.05■■■□□ 2.88
HOXB3-201ENST00000311626 MORC1Q86VD1 984 aa33.05■■■□□ 2.88
HOXB3-201ENST00000311626 NSD3Q9BZ95 1437 aa33.03■■■□□ 2.88
HOXB3-201ENST00000311626 SLC4A3P48751 1232 aa33.02■■■□□ 2.88
HOXB3-201ENST00000311626 NPM1P06748 294 aaKnown RBP eCLIP33.01■■■□□ 2.87
HOXB3-201ENST00000311626 E9PSI1 815 aa33■■■□□ 2.87
HOXB3-201ENST00000311626 NKTRP30414 1462 aaKnown RBP33■■■□□ 2.87
HOXB3-201ENST00000311626 NPATQ14207 1427 aa33■■■□□ 2.87
HOXB3-201ENST00000311626 SAFB2Q14151 953 aaKnown RBP eCLIP32.98■■■□□ 2.87
HOXB3-201ENST00000311626 IFT172Q9UG01 1749 aa32.98■■■□□ 2.87
HOXB3-201ENST00000311626 C14orf93Q9H972 538 aaKnown RBP32.98■■■□□ 2.87
HOXB3-201ENST00000311626 WWC1Q8IX03 1113 aa32.98■■■□□ 2.87
HOXB3-201ENST00000311626 ZNF518AQ6AHZ1 1483 aa32.97■■■□□ 2.87
HOXB3-201ENST00000311626 SLC24A1O60721 1099 aa32.97■■■□□ 2.87
HOXB3-201ENST00000311626 RAPGEF3O95398 923 aa32.96■■■□□ 2.87
HOXB3-201ENST00000311626 NRXN1Q9ULB1 1477 aa32.95■■■□□ 2.87
HOXB3-201ENST00000311626 NEURL4Q96JN8 1562 aa32.94■■■□□ 2.86
HOXB3-201ENST00000311626 PANK1Q8TE04 598 aa32.94■■■□□ 2.86
HOXB3-201ENST00000311626 ADGRB3O60242 1522 aa32.93■■■□□ 2.86
HOXB3-201ENST00000311626 CD109Q6YHK3 1445 aa32.92■■■□□ 2.86
HOXB3-201ENST00000311626 IGHDP01880 384 aa32.92■■■□□ 2.86
HOXB3-201ENST00000311626 NEFMP07197 916 aa32.92■■■□□ 2.86
HOXB3-201ENST00000311626 FRAT1Q92837 279 aaPredicted RBP32.91■■■□□ 2.86
HOXB3-201ENST00000311626 CANXP27824 592 aaKnown RBP32.91■■■□□ 2.86
HOXB3-201ENST00000311626 MTHFSP49914 203 aa32.91■■■□□ 2.86
HOXB3-201ENST00000311626 C8orf34Q49A92 452 aa32.91■■■□□ 2.86
HOXB3-201ENST00000311626 COG6Q9Y2V7 657 aa32.91■■■□□ 2.86
HOXB3-201ENST00000311626 POLR3AO14802 1390 aaPredicted RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms