RNA–Protein interactions for RNA: ENST00000311160.13

TNS3-201, Transcript of tensin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNS3, Length 7,618 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-201ENST00000311160 HDAC5Q9UQL6 1122 aa12.99□□□□□ -0.33
TNS3-201ENST00000311160 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
TNS3-201ENST00000311160 MTUS2Q5JR59 1369 aa12.99□□□□□ -0.33
TNS3-201ENST00000311160 GBP2P32456 591 aaPredicted RBP12.99□□□□□ -0.33
TNS3-201ENST00000311160 BICD2Q8TD16 824 aa12.99□□□□□ -0.33
TNS3-201ENST00000311160 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
TNS3-201ENST00000311160 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
TNS3-201ENST00000311160 CT47B1P0C2W7 299 aaPredicted RBP12.98□□□□□ -0.33
TNS3-201ENST00000311160 AEBP2Q6ZN18 517 aaPredicted RBP12.98□□□□□ -0.33
TNS3-201ENST00000311160 GOLGA6L7A0A1B0GV03 622 aa12.97□□□□□ -0.33
TNS3-201ENST00000311160 ERLIN2O94905 339 aa12.97□□□□□ -0.33
TNS3-201ENST00000311160 TTC16Q8NEE8 873 aa12.97□□□□□ -0.33
TNS3-201ENST00000311160 RBM33Q96EV2 1170 aaKnown RBP12.97□□□□□ -0.33
TNS3-201ENST00000311160 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
TNS3-201ENST00000311160 DDX49Q9Y6V7 483 aaKnown RBP12.96□□□□□ -0.33
TNS3-201ENST00000311160 RALBP1Q15311 655 aa12.96□□□□□ -0.33
TNS3-201ENST00000311160 CCDC112Q8NEF3 446 aa12.96□□□□□ -0.33
TNS3-201ENST00000311160 HDGFL2Q7Z4V5 671 aaPredicted RBP12.96□□□□□ -0.34
TNS3-201ENST00000311160 BBXQ8WY36 941 aaPredicted RBP12.96□□□□□ -0.34
TNS3-201ENST00000311160 SOGA3Q5TF21 947 aa12.95□□□□□ -0.34
TNS3-201ENST00000311160 GIMAP7Q8NHV1 300 aa12.95□□□□□ -0.34
TNS3-201ENST00000311160 TRDNQ13061 729 aa12.95□□□□□ -0.34
TNS3-201ENST00000311160 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
TNS3-201ENST00000311160 ZWINTO95229 277 aa12.95□□□□□ -0.34
TNS3-201ENST00000311160 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
TNS3-201ENST00000311160 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
TNS3-201ENST00000311160 MATR3P43243 847 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■■■□ 21.3
TNS3-201ENST00000311160 CCDC27Q2M243 656 aa12.95□□□□□ -0.34
TNS3-201ENST00000311160 CCDC175P0C221 793 aa12.94□□□□□ -0.34
TNS3-201ENST00000311160 BRPF1P55201 1214 aaPredicted RBP12.94□□□□□ -0.34
TNS3-201ENST00000311160 ATP6V1DQ9Y5K8 247 aa12.94□□□□□ -0.34
TNS3-201ENST00000311160 TAF3Q5VWG9 929 aa12.94□□□□□ -0.34
TNS3-201ENST00000311160 KIAA0754O94854 1291 aa12.94□□□□□ -0.34
TNS3-201ENST00000311160 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
TNS3-201ENST00000311160 LEKR1Q6ZMV7 388 aa12.93□□□□□ -0.34
TNS3-201ENST00000311160 ERCC4Q92889 916 aaPredicted RBP12.93□□□□□ -0.34
TNS3-201ENST00000311160 CHMP4AQ9BY43 222 aa12.93□□□□□ -0.34
TNS3-201ENST00000311160 SASS6Q6UVJ0 657 aa12.93□□□□□ -0.34
TNS3-201ENST00000311160 PPM1EQ8WY54 764 aa12.93□□□□□ -0.34
TNS3-201ENST00000311160 CHMP4CQ96CF2 233 aa12.93□□□□□ -0.34
TNS3-201ENST00000311160 LRRFIP1Q32MZ4 808 aaKnown RBP12.93□□□□□ -0.34
TNS3-201ENST00000311160 COMMD10Q9Y6G5 202 aa12.93□□□□□ -0.34
TNS3-201ENST00000311160 STAMBPO95630 424 aa12.92□□□□□ -0.34
TNS3-201ENST00000311160 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
TNS3-201ENST00000311160 RSPH6AQ9H0K4 717 aa12.92□□□□□ -0.34
TNS3-201ENST00000311160 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
TNS3-201ENST00000311160 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
TNS3-201ENST00000311160 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
TNS3-201ENST00000311160 SPATA24Q86W54 205 aa12.91□□□□□ -0.34
TNS3-201ENST00000311160 CDK5RAP3Q96JB5 506 aa12.91□□□□□ -0.34
TNS3-201ENST00000311160 SAFBQ15424 915 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNS3-201ENST00000311160 ANO2Q9NQ90 1003 aa12.91□□□□□ -0.34
TNS3-201ENST00000311160 OLFM4Q6UX06 510 aa12.91□□□□□ -0.34
TNS3-201ENST00000311160 ANAPC15P60006 121 aa12.9□□□□□ -0.34
TNS3-201ENST00000311160 TMF1P82094 1093 aa12.9□□□□□ -0.34
TNS3-201ENST00000311160 SSR1P43307 286 aaKnown RBP12.9□□□□□ -0.34
TNS3-201ENST00000311160 RBM19Q9Y4C8 960 aaKnown RBP12.9□□□□□ -0.34
TNS3-201ENST00000311160 RBM25P49756 843 aaKnown RBP12.9□□□□□ -0.34
TNS3-201ENST00000311160 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
TNS3-201ENST00000311160 AMPHP49418 695 aa12.9□□□□□ -0.34
TNS3-201ENST00000311160 SERPINA10Q9UK55 444 aa12.9□□□□□ -0.35
TNS3-201ENST00000311160 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 ZHX3Q9H4I2 956 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 CCDC181Q5TID7 509 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 EIF3JO75822 258 aaKnown RBP12.89□□□□□ -0.35
TNS3-201ENST00000311160 ATP2B2Q01814 1243 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 TICAM2Q86XR7 235 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 CHMP5Q9NZZ3 219 aa12.89□□□□□ -0.35
TNS3-201ENST00000311160 PLEKHD1A6NEE1 506 aa12.88□□□□□ -0.35
TNS3-201ENST00000311160 DNAJC2Q99543 621 aaKnown RBP12.88□□□□□ -0.35
TNS3-201ENST00000311160 MAGEC2Q9UBF1 373 aaPredicted RBP12.88□□□□□ -0.35
TNS3-201ENST00000311160 FAM193AP78312 1265 aa12.88□□□□□ -0.35
TNS3-201ENST00000311160 BRMS1Q9HCU9 246 aa12.88□□□□□ -0.35
TNS3-201ENST00000311160 DESP17661 470 aa12.88□□□□□ -0.35
TNS3-201ENST00000311160 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
TNS3-201ENST00000311160 MPHOSPH10O00566 681 aaKnown RBP12.87□□□□□ -0.35
TNS3-201ENST00000311160 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
TNS3-201ENST00000311160 WDR78Q5VTH9 848 aa12.87□□□□□ -0.35
TNS3-201ENST00000311160 CCDC91Q7Z6B0 441 aa12.87□□□□□ -0.35
TNS3-201ENST00000311160 NGDNQ8NEJ9 315 aaKnown RBP12.87□□□□□ -0.35
TNS3-201ENST00000311160 ZNF526Q8TF50 670 aaPredicted RBP12.87□□□□□ -0.35
TNS3-201ENST00000311160 VPS37CA5D8V6 355 aaPredicted RBP12.86□□□□□ -0.35
TNS3-201ENST00000311160 BMS1Q14692 1282 aaKnown RBP12.84□□□□□ -0.35
TNS3-201ENST00000311160 CA8P35219 290 aa12.84□□□□□ -0.35
TNS3-201ENST00000311160 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
TNS3-201ENST00000311160 PLIN1O60240 522 aa12.84□□□□□ -0.35
TNS3-201ENST00000311160 CFAP45Q9UL16 551 aa12.84□□□□□ -0.35
TNS3-201ENST00000311160 KIF3BO15066 747 aa12.84□□□□□ -0.35
TNS3-201ENST00000311160 ATP2B1P20020 1258 aa12.83□□□□□ -0.35
TNS3-201ENST00000311160 DEF6Q9H4E7 631 aa12.83□□□□□ -0.36
TNS3-201ENST00000311160 C9orf78Q9NZ63 289 aaPredicted RBP12.83□□□□□ -0.36
TNS3-201ENST00000311160 PAXIP1Q6ZW49 1069 aaPredicted RBP12.83□□□□□ -0.36
TNS3-201ENST00000311160 SMARCE1Q969G3 411 aa12.83□□□□□ -0.36
TNS3-201ENST00000311160 TRIM21P19474 475 aaKnown RBP12.82□□□□□ -0.36
TNS3-201ENST00000311160 TANGO6Q9C0B7 1094 aa12.82□□□□□ -0.36
TNS3-201ENST00000311160 MAP2K1Q02750 393 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms