RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 ATP7AQ04656 1500 aa17.4■□□□□ 0.38
RAB6A-201ENST00000310653 NOS1P29475 1434 aa17.4■□□□□ 0.38
RAB6A-201ENST00000310653 SMG6Q86US8 1419 aaKnown RBP17.39■□□□□ 0.37
RAB6A-201ENST00000310653 UNC13BO14795 1591 aa17.39■□□□□ 0.37
RAB6A-201ENST00000310653 RRP1P56182 461 aaKnown RBP17.39■□□□□ 0.37
RAB6A-201ENST00000310653 COL17A1Q9UMD9 1497 aaPredicted RBP17.38■□□□□ 0.37
RAB6A-201ENST00000310653 IQGAP3Q86VI3 1631 aa17.38■□□□□ 0.37
RAB6A-201ENST00000310653 IDI1Q13907 227 aa17.37■□□□□ 0.37
RAB6A-201ENST00000310653 STAG3Q9UJ98 1225 aa17.37■□□□□ 0.37
RAB6A-201ENST00000310653 GPRASP1Q5JY77 1395 aa17.36■□□□□ 0.37
RAB6A-201ENST00000310653 CLTCL1P53675 1640 aa17.36■□□□□ 0.37
RAB6A-201ENST00000310653 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
RAB6A-201ENST00000310653 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
RAB6A-201ENST00000310653 CRBNQ96SW2 442 aa17.36■□□□□ 0.37
RAB6A-201ENST00000310653 MINK1Q8N4C8 1332 aaPredicted RBP17.35■□□□□ 0.37
RAB6A-201ENST00000310653 PLXNC1O60486 1568 aa17.35■□□□□ 0.37
RAB6A-201ENST00000310653 BCL2L13Q9BXK5 485 aa17.34■□□□□ 0.37
RAB6A-201ENST00000310653 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.37
RAB6A-201ENST00000310653 PRDM15P57071 1507 aaPredicted RBP17.33■□□□□ 0.37
RAB6A-201ENST00000310653 PLEKHH1Q9ULM0 1364 aa17.33■□□□□ 0.36
RAB6A-201ENST00000310653 ERICH6Q7L0X2 663 aa17.33■□□□□ 0.36
RAB6A-201ENST00000310653 PPM1GO15355 546 aaPredicted RBP17.32■□□□□ 0.36
RAB6A-201ENST00000310653 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
RAB6A-201ENST00000310653 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
RAB6A-201ENST00000310653 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
RAB6A-201ENST00000310653 BCAR3O75815 825 aa17.31■□□□□ 0.36
RAB6A-201ENST00000310653 NBR1Q14596 966 aa17.31■□□□□ 0.36
RAB6A-201ENST00000310653 YEATS2Q9ULM3 1422 aa17.3■□□□□ 0.36
RAB6A-201ENST00000310653 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
RAB6A-201ENST00000310653 NPATQ14207 1427 aa17.3■□□□□ 0.36
RAB6A-201ENST00000310653 GGNBP2Q9H3C7 697 aa17.29■□□□□ 0.36
RAB6A-201ENST00000310653 SCAF11Q99590 1463 aaKnown RBP17.29■□□□□ 0.36
RAB6A-201ENST00000310653 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
RAB6A-201ENST00000310653 BCL11AQ9H165 835 aa17.28■□□□□ 0.36
RAB6A-201ENST00000310653 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
RAB6A-201ENST00000310653 FRAT1Q92837 279 aaPredicted RBP17.26■□□□□ 0.35
RAB6A-201ENST00000310653 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
RAB6A-201ENST00000310653 PTPRTO14522 1441 aa17.26■□□□□ 0.35
RAB6A-201ENST00000310653 MTHFSP49914 203 aa17.25■□□□□ 0.35
RAB6A-201ENST00000310653 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
RAB6A-201ENST00000310653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.353e-8■■■■■ 27.1
RAB6A-201ENST00000310653 U2SURPO15042 1029 aaKnown RBP17.24■□□□□ 0.35
RAB6A-201ENST00000310653 POGKQ9P215 609 aa17.24■□□□□ 0.35
RAB6A-201ENST00000310653 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
RAB6A-201ENST00000310653 TRPM2O94759 1503 aa17.24■□□□□ 0.35
RAB6A-201ENST00000310653 ZNF518AQ6AHZ1 1483 aa17.24■□□□□ 0.35
RAB6A-201ENST00000310653 NCKAP5LQ9HCH0 1330 aa17.23■□□□□ 0.35
RAB6A-201ENST00000310653 KIDINS220Q9ULH0 1771 aa17.23■□□□□ 0.35
RAB6A-201ENST00000310653 RGS3P49796 1198 aa17.23■□□□□ 0.35
RAB6A-201ENST00000310653 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
RAB6A-201ENST00000310653 CLUAP1Q96AJ1 413 aa17.23■□□□□ 0.35
RAB6A-201ENST00000310653 TNNQ9UQP3 1299 aa17.23■□□□□ 0.35
RAB6A-201ENST00000310653 GOLGA2Q08379 1002 aa17.22■□□□□ 0.35
RAB6A-201ENST00000310653 CEP152O94986 1710 aa17.22■□□□□ 0.35
RAB6A-201ENST00000310653 SPHKAPQ2M3C7 1700 aa17.22■□□□□ 0.35
RAB6A-201ENST00000310653 DUSP27Q5VZP5 1158 aa17.22■□□□□ 0.35
RAB6A-201ENST00000310653 NSD3Q9BZ95 1437 aa17.22■□□□□ 0.35
RAB6A-201ENST00000310653 SOX12O15370 315 aa17.21■□□□□ 0.35
RAB6A-201ENST00000310653 EIF3AQ14152 1382 aaKnown RBP17.21■□□□□ 0.35
RAB6A-201ENST00000310653 C14orf93Q9H972 538 aaKnown RBP17.21■□□□□ 0.35
RAB6A-201ENST00000310653 ABCA9Q8IUA7 1624 aa17.2■□□□□ 0.34
RAB6A-201ENST00000310653 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
RAB6A-201ENST00000310653 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
RAB6A-201ENST00000310653 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.344e-9■■□□□ 12.7
RAB6A-201ENST00000310653 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
RAB6A-201ENST00000310653 ERVK-7P63135 1459 aa17.2■□□□□ 0.34
RAB6A-201ENST00000310653 PPRC1Q5VV67 1664 aaKnown RBP17.2■□□□□ 0.34
RAB6A-201ENST00000310653 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
RAB6A-201ENST00000310653 INO80Q9ULG1 1556 aaPredicted RBP17.18■□□□□ 0.34
RAB6A-201ENST00000310653 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
RAB6A-201ENST00000310653 CANXP27824 592 aaKnown RBP17.18■□□□□ 0.34
RAB6A-201ENST00000310653 PANK1Q8TE04 598 aa17.18■□□□□ 0.34
RAB6A-201ENST00000310653 SLC4A3P48751 1232 aa17.17■□□□□ 0.34
RAB6A-201ENST00000310653 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
RAB6A-201ENST00000310653 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
RAB6A-201ENST00000310653 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
RAB6A-201ENST00000310653 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
RAB6A-201ENST00000310653 TCP11L2Q8N4U5 519 aa17.15■□□□□ 0.34
RAB6A-201ENST00000310653 EIF2AK4Q9P2K8 1649 aaKnown RBP17.15■□□□□ 0.34
RAB6A-201ENST00000310653 COG6Q9Y2V7 657 aa17.15■□□□□ 0.34
RAB6A-201ENST00000310653 TET3O43151 1660 aa17.14■□□□□ 0.34
RAB6A-201ENST00000310653 ABCA6Q8N139 1617 aa17.14■□□□□ 0.34
RAB6A-201ENST00000310653 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
RAB6A-201ENST00000310653 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
RAB6A-201ENST00000310653 CEBPAP49715 358 aaPredicted RBP17.14■□□□□ 0.33
RAB6A-201ENST00000310653 ZRANB1Q9UGI0 708 aa17.14■□□□□ 0.33
RAB6A-201ENST00000310653 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
RAB6A-201ENST00000310653 FRMPD1Q5SYB0 1578 aa17.13■□□□□ 0.33
RAB6A-201ENST00000310653 EFCAB6Q5THR3 1501 aa17.13■□□□□ 0.33
RAB6A-201ENST00000310653 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
RAB6A-201ENST00000310653 TXNDC2Q86VQ3 553 aa17.12■□□□□ 0.33
RAB6A-201ENST00000310653 ASXL1Q8IXJ9 1541 aa17.12■□□□□ 0.33
RAB6A-201ENST00000310653 TCERG1O14776 1098 aaKnown RBP17.12■□□□□ 0.33
RAB6A-201ENST00000310653 SLFN5Q08AF3 891 aa17.12■□□□□ 0.33
RAB6A-201ENST00000310653 LAS1LQ9Y4W2 734 aaKnown RBP17.12■□□□□ 0.33
RAB6A-201ENST00000310653 WWC1Q8IX03 1113 aa17.11■□□□□ 0.33
RAB6A-201ENST00000310653 PDE4AP27815 886 aa17.09■□□□□ 0.33
RAB6A-201ENST00000310653 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
RAB6A-201ENST00000310653 ESF1Q9H501 851 aaKnown RBP17.09■□□□□ 0.33
RAB6A-201ENST00000310653 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms