RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
SPIRE1-201ENST00000309836 CDCA7LQ96GN5 454 aa20.31■□□□□ 0.84
SPIRE1-201ENST00000309836 EFCAB6Q5THR3 1501 aa20.31■□□□□ 0.84
SPIRE1-201ENST00000309836 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
SPIRE1-201ENST00000309836 MAP3K4Q9Y6R4 1608 aa20.3■□□□□ 0.84
SPIRE1-201ENST00000309836 MYOM2P54296 1465 aa20.3■□□□□ 0.84
SPIRE1-201ENST00000309836 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
SPIRE1-201ENST00000309836 AMER1Q5JTC6 1135 aaPredicted RBP20.29■□□□□ 0.84
SPIRE1-201ENST00000309836 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
SPIRE1-201ENST00000309836 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
SPIRE1-201ENST00000309836 EXOC6Q8TAG9 804 aa20.28■□□□□ 0.84
SPIRE1-201ENST00000309836 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.84
SPIRE1-201ENST00000309836 PPP2R1AP30153 589 aa20.27■□□□□ 0.84
SPIRE1-201ENST00000309836 MYT1LQ9UL68 1186 aa20.27■□□□□ 0.84
SPIRE1-201ENST00000309836 KNSTRNQ9Y448 316 aa20.27■□□□□ 0.84
SPIRE1-201ENST00000309836 KIF1BO60333 1816 aa20.27■□□□□ 0.83
SPIRE1-201ENST00000309836 EIF3AQ14152 1382 aaKnown RBP20.27■□□□□ 0.83
SPIRE1-201ENST00000309836 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
SPIRE1-201ENST00000309836 CDCA8Q53HL2 280 aa20.26■□□□□ 0.83
SPIRE1-201ENST00000309836 LMTK2Q8IWU2 1503 aa20.26■□□□□ 0.83
SPIRE1-201ENST00000309836 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
SPIRE1-201ENST00000309836 ADGRF5Q8IZF2 1346 aa20.24■□□□□ 0.83
SPIRE1-201ENST00000309836 CFAP70Q5T0N1 1121 aa20.23■□□□□ 0.83
SPIRE1-201ENST00000309836 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
SPIRE1-201ENST00000309836 ERVK-7P63135 1459 aa20.22■□□□□ 0.83
SPIRE1-201ENST00000309836 ZNF518AQ6AHZ1 1483 aa20.22■□□□□ 0.83
SPIRE1-201ENST00000309836 NPC1L1Q9UHC9 1359 aa20.22■□□□□ 0.83
SPIRE1-201ENST00000309836 PIK3C2GO75747 1445 aa20.21■□□□□ 0.83
SPIRE1-201ENST00000309836 ADGRB3O60242 1522 aa20.2■□□□□ 0.82
SPIRE1-201ENST00000309836 MYO3AQ8NEV4 1616 aa20.19■□□□□ 0.82
SPIRE1-201ENST00000309836 FRMPD1Q5SYB0 1578 aa20.19■□□□□ 0.82
SPIRE1-201ENST00000309836 PLEKHH1Q9ULM0 1364 aa20.18■□□□□ 0.82
SPIRE1-201ENST00000309836 CFAP74Q9C0B2 1584 aa20.17■□□□□ 0.82
SPIRE1-201ENST00000309836 POGZQ7Z3K3 1410 aa20.17■□□□□ 0.82
SPIRE1-201ENST00000309836 ERICH6Q7L0X2 663 aa20.17■□□□□ 0.82
SPIRE1-201ENST00000309836 WDR43Q15061 677 aaKnown RBP eCLIP20.16■□□□□ 0.82
SPIRE1-201ENST00000309836 PLIN1O60240 522 aa20.16■□□□□ 0.82
SPIRE1-201ENST00000309836 NOS1P29475 1434 aa20.15■□□□□ 0.82
SPIRE1-201ENST00000309836 ZNF521Q96K83 1311 aa20.14■□□□□ 0.81
SPIRE1-201ENST00000309836 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
SPIRE1-201ENST00000309836 NPATQ14207 1427 aa20.13■□□□□ 0.81
SPIRE1-201ENST00000309836 CD109Q6YHK3 1445 aa20.13■□□□□ 0.81
SPIRE1-201ENST00000309836 MLH3Q9UHC1 1453 aa20.13■□□□□ 0.81
SPIRE1-201ENST00000309836 HECW2Q9P2P5 1572 aa20.13■□□□□ 0.81
SPIRE1-201ENST00000309836 PPLO60437 1756 aa20.12■□□□□ 0.81
SPIRE1-201ENST00000309836 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
SPIRE1-201ENST00000309836 SBNO2Q9Y2G9 1366 aa20.11■□□□□ 0.81
SPIRE1-201ENST00000309836 CRBNQ96SW2 442 aa20.11■□□□□ 0.81
SPIRE1-201ENST00000309836 CARD14Q9BXL6 1004 aa20.11■□□□□ 0.81
SPIRE1-201ENST00000309836 SLC24A1O60721 1099 aa20.09■□□□□ 0.81
SPIRE1-201ENST00000309836 DUSP27Q5VZP5 1158 aa20.09■□□□□ 0.81
SPIRE1-201ENST00000309836 NPM1P06748 294 aaKnown RBP eCLIP20.08■□□□□ 0.81
SPIRE1-201ENST00000309836 ABCC3O15438 1527 aa20.08■□□□□ 0.81
SPIRE1-201ENST00000309836 ADGRB1O14514 1584 aa20.08■□□□□ 0.8
SPIRE1-201ENST00000309836 TCERG1O14776 1098 aaKnown RBP20.07■□□□□ 0.8
SPIRE1-201ENST00000309836 NOP58Q9Y2X3 529 aaKnown RBP20.07■□□□□ 0.8
SPIRE1-201ENST00000309836 C20orf194Q5TEA3 1177 aa20.06■□□□□ 0.8
SPIRE1-201ENST00000309836 QRICH2Q9H0J4 1663 aa20.06■□□□□ 0.8
SPIRE1-201ENST00000309836 CFAP65Q6ZU64 1925 aaKnown RBP20.06■□□□□ 0.8
SPIRE1-201ENST00000309836 CENPJQ9HC77 1338 aaPredicted RBP20.06■□□□□ 0.8
SPIRE1-201ENST00000309836 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
SPIRE1-201ENST00000309836 PAK3O75914 559 aaPredicted RBP20.05■□□□□ 0.8
SPIRE1-201ENST00000309836 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
SPIRE1-201ENST00000309836 CCDC146Q8IYE0 955 aa20.05■□□□□ 0.8
SPIRE1-201ENST00000309836 CAMSAP1Q5T5Y3 1602 aa20.05■□□□□ 0.8
SPIRE1-201ENST00000309836 C14orf93Q9H972 538 aaKnown RBP20.04■□□□□ 0.8
SPIRE1-201ENST00000309836 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
SPIRE1-201ENST00000309836 SLFN5Q08AF3 891 aa20.03■□□□□ 0.8
SPIRE1-201ENST00000309836 GGT6Q6P531 493 aa20.03■□□□□ 0.8
SPIRE1-201ENST00000309836 ANP32AP39687 249 aaKnown RBP20.03■□□□□ 0.8
SPIRE1-201ENST00000309836 OSCARQ8IYS5 282 aa20.03■□□□□ 0.8
SPIRE1-201ENST00000309836 TRMT2AQ8IZ69 625 aaKnown RBP20.02■□□□□ 0.8
SPIRE1-201ENST00000309836 IPO9Q96P70 1041 aaKnown RBP20.01■□□□□ 0.79
SPIRE1-201ENST00000309836 MS4A1P11836 297 aa20.01■□□□□ 0.79
SPIRE1-201ENST00000309836 PIK3C2BO00750 1634 aa20■□□□□ 0.79
SPIRE1-201ENST00000309836 TRAK1Q9UPV9 953 aa20■□□□□ 0.79
SPIRE1-201ENST00000309836 DIP2CQ9Y2E4 1556 aa19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 NSD3Q9BZ95 1437 aa19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 APAF1O14727 1248 aa19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 NEO1Q92859 1461 aa19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 RPGRIP1LQ68CZ1 1315 aa19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 PDE4AP27815 886 aa19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 SPINK5Q9NQ38 1064 aaPredicted RBP19.99■□□□□ 0.79
SPIRE1-201ENST00000309836 SHPRHQ149N8 1683 aa19.98■□□□□ 0.79
SPIRE1-201ENST00000309836 POLR3AO14802 1390 aaPredicted RBP19.98■□□□□ 0.79
SPIRE1-201ENST00000309836 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
SPIRE1-201ENST00000309836 GLI2P10070 1586 aa19.97■□□□□ 0.79
SPIRE1-201ENST00000309836 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
SPIRE1-201ENST00000309836 BACH2Q9BYV9 841 aa19.96■□□□□ 0.79
SPIRE1-201ENST00000309836 KDM2BQ8NHM5 1336 aa19.96■□□□□ 0.79
SPIRE1-201ENST00000309836 NEXMIFQ5QGS0 1516 aa19.96■□□□□ 0.79
SPIRE1-201ENST00000309836 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
SPIRE1-201ENST00000309836 RAPGEF3O95398 923 aa19.94■□□□□ 0.78
SPIRE1-201ENST00000309836 SLC12A5Q9H2X9 1139 aa19.94■□□□□ 0.78
SPIRE1-201ENST00000309836 NKTRP30414 1462 aaKnown RBP19.94■□□□□ 0.78
SPIRE1-201ENST00000309836 ARHGEF28Q8N1W1 1705 aaKnown RBP19.94■□□□□ 0.78
SPIRE1-201ENST00000309836 DMRT2Q9Y5R5 561 aa19.94■□□□□ 0.78
SPIRE1-201ENST00000309836 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
SPIRE1-201ENST00000309836 RICTORQ6R327 1708 aa19.92■□□□□ 0.78
SPIRE1-201ENST00000309836 E9PSI1 815 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms