RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 FOXD4L5Q5VV16 416 aaPredicted RBP25.51■■□□□ 1.67
SH3RF3-201ENST00000309415 FOXD4L4Q8WXT5 416 aaPredicted RBP25.51■■□□□ 1.67
SH3RF3-201ENST00000309415 IFIT2P09913 472 aaKnown RBP25.51■■□□□ 1.67
SH3RF3-201ENST00000309415 DHX16O60231 1041 aaKnown RBP25.51■■□□□ 1.67
SH3RF3-201ENST00000309415 CPLX2Q6PUV4 134 aaKnown RBP25.51■■□□□ 1.67
SH3RF3-201ENST00000309415 PHF14O94880 888 aa25.51■■□□□ 1.67
SH3RF3-201ENST00000309415 RUFY2Q8WXA3 655 aa25.5■■□□□ 1.67
SH3RF3-201ENST00000309415 DHX57Q6P158 1386 aaKnown RBP25.5■■□□□ 1.67
SH3RF3-201ENST00000309415 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
SH3RF3-201ENST00000309415 RBM19Q9Y4C8 960 aaKnown RBP25.49■■□□□ 1.67
SH3RF3-201ENST00000309415 NLRP2Q9NX02 1062 aa25.49■■□□□ 1.67
SH3RF3-201ENST00000309415 USP47Q96K76 1375 aa25.48■■□□□ 1.67
SH3RF3-201ENST00000309415 RIPK4P57078 832 aa25.48■■□□□ 1.67
SH3RF3-201ENST00000309415 TRIM29Q14134 588 aa25.47■■□□□ 1.67
SH3RF3-201ENST00000309415 TPM2P07951 284 aa25.47■■□□□ 1.67
SH3RF3-201ENST00000309415 G3BP1Q13283 466 aaKnown RBP eCLIP25.47■■□□□ 1.67
SH3RF3-201ENST00000309415 FKBP5Q13451 457 aaPredicted RBP25.45■■□□□ 1.66
SH3RF3-201ENST00000309415 API5Q9BZZ5 524 aaKnown RBP25.44■■□□□ 1.66
SH3RF3-201ENST00000309415 TSR1Q2NL82 804 aaKnown RBP25.44■■□□□ 1.66
SH3RF3-201ENST00000309415 MCTP1Q6DN14 999 aa25.44■■□□□ 1.66
SH3RF3-201ENST00000309415 GOLGA6L3A6NEY3 463 aa25.44■■□□□ 1.66
SH3RF3-201ENST00000309415 SMARCA4P51532 1647 aa25.43■■□□□ 1.66
SH3RF3-201ENST00000309415 TSPYL4Q9UJ04 414 aa25.43■■□□□ 1.66
SH3RF3-201ENST00000309415 ANO8Q9HCE9 1232 aaPredicted RBP25.43■■□□□ 1.66
SH3RF3-201ENST00000309415 ZKSCAN1P17029 563 aaPredicted RBP25.42■■□□□ 1.66
SH3RF3-201ENST00000309415 TRDNQ13061 729 aa25.42■■□□□ 1.66
SH3RF3-201ENST00000309415 NUTM2GQ5VZR2 741 aa25.42■■□□□ 1.66
SH3RF3-201ENST00000309415 ATP6V1DQ9Y5K8 247 aa25.42■■□□□ 1.66
SH3RF3-201ENST00000309415 MYOM3Q5VTT5 1437 aa25.42■■□□□ 1.66
SH3RF3-201ENST00000309415 ROCK1Q13464 1354 aa25.41■■□□□ 1.66
SH3RF3-201ENST00000309415 MIA2Q96PC5 1412 aa25.41■■□□□ 1.66
SH3RF3-201ENST00000309415 APAF1O14727 1248 aa25.41■■□□□ 1.66
SH3RF3-201ENST00000309415 CENPQQ7L2Z9 268 aaPredicted RBP25.4■■□□□ 1.66
SH3RF3-201ENST00000309415 GOLGA6L1Q8N7Z2 621 aa25.4■■□□□ 1.66
SH3RF3-201ENST00000309415 RIC3Q7Z5B4 369 aa25.39■■□□□ 1.66
SH3RF3-201ENST00000309415 WASHC2AQ641Q2 1341 aa25.39■■□□□ 1.66
SH3RF3-201ENST00000309415 CPLX1O14810 134 aa25.39■■□□□ 1.66
SH3RF3-201ENST00000309415 ANO2Q9NQ90 1003 aa25.39■■□□□ 1.66
SH3RF3-201ENST00000309415 ERICH2A1L162 156 aa25.39■■□□□ 1.66
SH3RF3-201ENST00000309415 WWC1Q8IX03 1113 aa25.39■■□□□ 1.65
SH3RF3-201ENST00000309415 DEKP35659 375 aaKnown RBP25.38■■□□□ 1.65
SH3RF3-201ENST00000309415 DDX19BQ9UMR2 479 aa25.38■■□□□ 1.65
SH3RF3-201ENST00000309415 GPRASP1Q5JY77 1395 aa25.38■■□□□ 1.65
SH3RF3-201ENST00000309415 CCDC47Q96A33 483 aaKnown RBP25.38■■□□□ 1.65
SH3RF3-201ENST00000309415 NFXL1Q6ZNB6 911 aa25.38■■□□□ 1.65
SH3RF3-201ENST00000309415 COG6Q9Y2V7 657 aa25.37■■□□□ 1.65
SH3RF3-201ENST00000309415 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
SH3RF3-201ENST00000309415 NLRP6P59044 892 aa25.36■■□□□ 1.65
SH3RF3-201ENST00000309415 SAMD1Q6SPF0 538 aaPredicted RBP25.36■■□□□ 1.65
SH3RF3-201ENST00000309415 KRI1Q8N9T8 703 aaKnown RBP25.36■■□□□ 1.65
SH3RF3-201ENST00000309415 CCDC43Q96MW1 224 aaKnown RBP25.36■■□□□ 1.65
SH3RF3-201ENST00000309415 TPM1P09493 284 aa25.35■■□□□ 1.65
SH3RF3-201ENST00000309415 AIMP1Q12904 312 aaKnown RBP25.35■■□□□ 1.65
SH3RF3-201ENST00000309415 CNKSR2Q8WXI2 1034 aa25.35■■□□□ 1.65
SH3RF3-201ENST00000309415 GNAI1P63096 354 aa25.35■■□□□ 1.65
SH3RF3-201ENST00000309415 PLIN1O60240 522 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 HMOX1P09601 288 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 RNF20Q5VTR2 975 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 PROSER2Q86WR7 435 aaPredicted RBP25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 PRDM2Q13029 1718 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 REC8O95072 547 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 HSP90AB4PQ58FF6 505 aa25.34■■□□□ 1.65
SH3RF3-201ENST00000309415 USP35Q9P2H5 1018 aa25.33■■□□□ 1.65
SH3RF3-201ENST00000309415 ESCO1Q5FWF5 840 aa25.33■■□□□ 1.65
SH3RF3-201ENST00000309415 RUNDC1Q96C34 613 aa25.33■■□□□ 1.65
SH3RF3-201ENST00000309415 GOLGA6L19H0YKK7 550 aa25.33■■□□□ 1.65
SH3RF3-201ENST00000309415 RAD54L2Q9Y4B4 1467 aa25.32■■□□□ 1.64
SH3RF3-201ENST00000309415 CABP2Q9NPB3 220 aa25.32■■□□□ 1.64
SH3RF3-201ENST00000309415 BECN2A8MW95 431 aa25.31■■□□□ 1.64
SH3RF3-201ENST00000309415 DZIP1LQ8IYY4 767 aaKnown RBP25.31■■□□□ 1.64
SH3RF3-201ENST00000309415 DDX11L8A8MPP1 907 aa25.31■■□□□ 1.64
SH3RF3-201ENST00000309415 FOXD4L6Q3SYB3 417 aaPredicted RBP25.31■■□□□ 1.64
SH3RF3-201ENST00000309415 FOXD4L3Q6VB84 417 aaPredicted RBP25.31■■□□□ 1.64
SH3RF3-201ENST00000309415 IPO9Q96P70 1041 aaKnown RBP25.31■■□□□ 1.64
SH3RF3-201ENST00000309415 SF3B2Q13435 895 aaKnown RBP25.3■■□□□ 1.64
SH3RF3-201ENST00000309415 TXNDC2Q86VQ3 553 aa25.3■■□□□ 1.64
SH3RF3-201ENST00000309415 NEUROD6Q96NK8 337 aa25.3■■□□□ 1.64
SH3RF3-201ENST00000309415 CCDC27Q2M243 656 aa25.3■■□□□ 1.64
SH3RF3-201ENST00000309415 PCMTD1Q96MG8 357 aaPredicted RBP25.29■■□□□ 1.64
SH3RF3-201ENST00000309415 GGNBP2Q9H3C7 697 aa25.29■■□□□ 1.64
SH3RF3-201ENST00000309415 ABTB2Q8N961 1025 aa25.29■■□□□ 1.64
SH3RF3-201ENST00000309415 PRKRIP1Q9H875 184 aaPredicted RBP25.29■■□□□ 1.64
SH3RF3-201ENST00000309415 CRBNQ96SW2 442 aa25.29■■□□□ 1.64
SH3RF3-201ENST00000309415 FYB1O15117 783 aa25.28■■□□□ 1.64
SH3RF3-201ENST00000309415 ERC2O15083 957 aa25.28■■□□□ 1.64
SH3RF3-201ENST00000309415 RRP1P56182 461 aaKnown RBP25.27■■□□□ 1.64
SH3RF3-201ENST00000309415 ARHGAP5Q13017 1502 aa25.27■■□□□ 1.64
SH3RF3-201ENST00000309415 FAM161AQ3B820 660 aa25.27■■□□□ 1.64
SH3RF3-201ENST00000309415 AQRO60306 1485 aaKnown RBP eCLIP25.27■■□□□ 1.64
SH3RF3-201ENST00000309415 TMEM132EQ6IEE7 984 aa25.25■■□□□ 1.63
SH3RF3-201ENST00000309415 STRN4Q9NRL3 753 aa25.25■■□□□ 1.63
SH3RF3-201ENST00000309415 WASHC4Q2M389 1173 aa25.25■■□□□ 1.63
SH3RF3-201ENST00000309415 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
SH3RF3-201ENST00000309415 ANKRD20A12PQ8NF67 263 aa25.24■■□□□ 1.63
SH3RF3-201ENST00000309415 RBM42Q9BTD8 480 aaKnown RBP25.24■■□□□ 1.63
SH3RF3-201ENST00000309415 KIF6Q6ZMV9 814 aa25.24■■□□□ 1.63
SH3RF3-201ENST00000309415 ARID3AQ99856 593 aa25.24■■□□□ 1.63
SH3RF3-201ENST00000309415 CUX1P39880 1505 aa25.24■■□□□ 1.63
SH3RF3-201ENST00000309415 HOOK1Q9UJC3 728 aaKnown RBP25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms