RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 GSE1Q14687 1217 aa11.82□□□□□ -0.52
XCR1-201ENST00000309285 SPRYD3Q8NCJ5 442 aa11.81□□□□□ -0.52
XCR1-201ENST00000309285 TRAPPC8Q9Y2L5 1435 aa11.81□□□□□ -0.52
XCR1-201ENST00000309285 U2SURPO15042 1029 aaKnown RBP11.81□□□□□ -0.52
XCR1-201ENST00000309285 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
XCR1-201ENST00000309285 ABCA8O94911 1581 aa11.81□□□□□ -0.52
XCR1-201ENST00000309285 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
XCR1-201ENST00000309285 FRAT1Q92837 279 aaPredicted RBP11.8□□□□□ -0.52
XCR1-201ENST00000309285 FAM69CQ0P6D2 419 aa11.8□□□□□ -0.52
XCR1-201ENST00000309285 FTSJ3Q8IY81 847 aaKnown RBP11.8□□□□□ -0.52
XCR1-201ENST00000309285 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
XCR1-201ENST00000309285 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
XCR1-201ENST00000309285 FANCAO15360 1455 aa11.79□□□□□ -0.52
XCR1-201ENST00000309285 ADGRL1O94910 1474 aa11.79□□□□□ -0.52
XCR1-201ENST00000309285 SLKQ9H2G2 1235 aaPredicted RBP11.79□□□□□ -0.52
XCR1-201ENST00000309285 MAPK8IP3Q9UPT6 1336 aa11.79□□□□□ -0.52
XCR1-201ENST00000309285 ABCC2Q92887 1545 aa11.79□□□□□ -0.52
XCR1-201ENST00000309285 CENPJQ9HC77 1338 aaPredicted RBP11.79□□□□□ -0.52
XCR1-201ENST00000309285 ERBINQ96RT1 1412 aa11.78□□□□□ -0.52
XCR1-201ENST00000309285 PLCB2Q00722 1185 aa11.78□□□□□ -0.52
XCR1-201ENST00000309285 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
XCR1-201ENST00000309285 PLIN1O60240 522 aa11.78□□□□□ -0.52
XCR1-201ENST00000309285 ADAMTS8Q9UP79 889 aa11.77□□□□□ -0.52
XCR1-201ENST00000309285 MBD5Q9P267 1494 aa11.77□□□□□ -0.52
XCR1-201ENST00000309285 CDCA7LQ96GN5 454 aa11.77□□□□□ -0.53
XCR1-201ENST00000309285 DENND4BO75064 1496 aaPredicted RBP11.77□□□□□ -0.53
XCR1-201ENST00000309285 RALGAPBQ86X10 1494 aa11.77□□□□□ -0.53
XCR1-201ENST00000309285 TNNT3P45378 269 aaPredicted RBP11.77□□□□□ -0.53
XCR1-201ENST00000309285 U2AF1L5P0DN76 240 aaPredicted RBP11.76□□□□□ -0.53
XCR1-201ENST00000309285 U2AF1Q01081 240 aaKnown RBP eCLIP11.76□□□□□ -0.53
XCR1-201ENST00000309285 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
XCR1-201ENST00000309285 GOLGA6L3A6NEY3 463 aa11.76□□□□□ -0.53
XCR1-201ENST00000309285 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
XCR1-201ENST00000309285 APAF1O14727 1248 aa11.75□□□□□ -0.53
XCR1-201ENST00000309285 EXOC6Q8TAG9 804 aa11.75□□□□□ -0.53
XCR1-201ENST00000309285 PPP2R1AP30153 589 aa11.74□□□□□ -0.53
XCR1-201ENST00000309285 BRPF3Q9ULD4 1205 aa11.74□□□□□ -0.53
XCR1-201ENST00000309285 PRAG1Q86YV5 1406 aa11.74□□□□□ -0.53
XCR1-201ENST00000309285 DUOX2Q9NRD8 1548 aa11.74□□□□□ -0.53
XCR1-201ENST00000309285 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
XCR1-201ENST00000309285 ASXL2Q76L83 1435 aa11.73□□□□□ -0.53
XCR1-201ENST00000309285 ADGRF5Q8IZF2 1346 aa11.73□□□□□ -0.53
XCR1-201ENST00000309285 MINK1Q8N4C8 1332 aaPredicted RBP11.73□□□□□ -0.53
XCR1-201ENST00000309285 DISP3Q9P2K9 1392 aa11.73□□□□□ -0.53
XCR1-201ENST00000309285 EVC2Q86UK5 1308 aa11.73□□□□□ -0.53
XCR1-201ENST00000309285 RRP7AQ9Y3A4 280 aaKnown RBP11.73□□□□□ -0.53
XCR1-201ENST00000309285 SLC4A3P48751 1232 aa11.73□□□□□ -0.53
XCR1-201ENST00000309285 DHX29Q7Z478 1369 aaKnown RBP11.73□□□□□ -0.53
XCR1-201ENST00000309285 SLC12A5Q9H2X9 1139 aa11.72□□□□□ -0.53
XCR1-201ENST00000309285 WDR7Q9Y4E6 1490 aa11.72□□□□□ -0.53
XCR1-201ENST00000309285 HDGFL2Q7Z4V5 671 aaPredicted RBP11.72□□□□□ -0.53
XCR1-201ENST00000309285 TCERG1O14776 1098 aaKnown RBP11.72□□□□□ -0.53
XCR1-201ENST00000309285 OS9Q13438 667 aaPredicted RBP11.72□□□□□ -0.53
XCR1-201ENST00000309285 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.71□□□□□ -0.53
XCR1-201ENST00000309285 TESK2Q96S53 571 aa11.71□□□□□ -0.53
XCR1-201ENST00000309285 UBE2Q2Q8WVN8 375 aa11.71□□□□□ -0.53
XCR1-201ENST00000309285 TERF2IPQ9NYB0 399 aa11.71□□□□□ -0.53
XCR1-201ENST00000309285 CGNL1Q0VF96 1302 aa11.71□□□□□ -0.54
XCR1-201ENST00000309285 ADGBQ8N7X0 1667 aa11.71□□□□□ -0.54
XCR1-201ENST00000309285 ARHGEF12Q9NZN5 1544 aa11.71□□□□□ -0.54
XCR1-201ENST00000309285 UHRF1BP1Q6BDS2 1440 aa11.71□□□□□ -0.54
XCR1-201ENST00000309285 ZRSR1Q15695 479 aaKnown RBP11.7□□□□□ -0.54
XCR1-201ENST00000309285 ERCC6L2Q5T890 1561 aa11.7□□□□□ -0.54
XCR1-201ENST00000309285 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
XCR1-201ENST00000309285 CABP2Q9NPB3 220 aa11.7□□□□□ -0.54
XCR1-201ENST00000309285 HDGFP51858 240 aaKnown RBP11.69□□□□□ -0.54
XCR1-201ENST00000309285 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
XCR1-201ENST00000309285 CHD1O14646 1710 aa11.69□□□□□ -0.54
XCR1-201ENST00000309285 FGD1P98174 961 aa11.69□□□□□ -0.54
XCR1-201ENST00000309285 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
XCR1-201ENST00000309285 SAMD9LQ8IVG5 1584 aa11.69□□□□□ -0.54
XCR1-201ENST00000309285 HSP90AB1P08238 724 aaKnown RBP11.69□□□□□ -0.54
XCR1-201ENST00000309285 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
XCR1-201ENST00000309285 ARHGEF5Q12774 1597 aa11.68□□□□□ -0.54
XCR1-201ENST00000309285 KDM5BQ9UGL1 1544 aa11.68□□□□□ -0.54
XCR1-201ENST00000309285 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
XCR1-201ENST00000309285 CDC42BPAQ5VT25 1732 aa11.68□□□□□ -0.54
XCR1-201ENST00000309285 A2MP01023 1474 aa11.67□□□□□ -0.54
XCR1-201ENST00000309285 PTMSP20962 102 aa11.67□□□□□ -0.54
XCR1-201ENST00000309285 KCNJ4P48050 445 aa11.67□□□□□ -0.54
XCR1-201ENST00000309285 TTC37Q6PGP7 1564 aa11.67□□□□□ -0.54
XCR1-201ENST00000309285 CASC1Q6TDU7 716 aa11.66□□□□□ -0.54
XCR1-201ENST00000309285 FAM13BQ9NYF5 915 aa11.66□□□□□ -0.54
XCR1-201ENST00000309285 SLC52A1Q9NWF4 448 aa11.66□□□□□ -0.54
XCR1-201ENST00000309285 NUTM2FA1L443 756 aa11.65□□□□□ -0.54
XCR1-201ENST00000309285 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
XCR1-201ENST00000309285 MTHFSP49914 203 aa11.65□□□□□ -0.54
XCR1-201ENST00000309285 ZNF330Q9Y3S2 320 aaPredicted RBP11.65□□□□□ -0.54
XCR1-201ENST00000309285 HSCBQ8IWL3 235 aa11.65□□□□□ -0.54
XCR1-201ENST00000309285 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
XCR1-201ENST00000309285 SCAF11Q99590 1463 aaKnown RBP11.65□□□□□ -0.55
XCR1-201ENST00000309285 RTEL1-TNFRSF6BF6WH68 1400 aa11.65□□□□□ -0.55
XCR1-201ENST00000309285 E9PSI1 815 aa11.65□□□□□ -0.55
XCR1-201ENST00000309285 PAK3O75914 559 aaPredicted RBP11.65□□□□□ -0.55
XCR1-201ENST00000309285 IDI1Q13907 227 aa11.65□□□□□ -0.55
XCR1-201ENST00000309285 CLUAP1Q96AJ1 413 aa11.64□□□□□ -0.55
XCR1-201ENST00000309285 BCL2L13Q9BXK5 485 aa11.64□□□□□ -0.55
XCR1-201ENST00000309285 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
XCR1-201ENST00000309285 APBB1O00213 710 aa11.64□□□□□ -0.55
XCR1-201ENST00000309285 NOS1P29475 1434 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms