RNA–Protein interactions for RNA: ENST00000309083.6

PTMS-201, Transcript of parathymosin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTMS, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-201ENST00000309083 UPF1Q92900 1129 aaKnown RBP eCLIP27.88■■■□□ 2.052e-9■■□□□ 13.8
PTMS-201ENST00000309083 UGGT1Q9NYU2 1555 aa27.87■■■□□ 2.05
PTMS-201ENST00000309083 ANKRD30BQ9BXX2 1392 aa27.86■■■□□ 2.05
PTMS-201ENST00000309083 FOXD1Q16676 465 aa27.81■■■□□ 2.04
PTMS-201ENST00000309083 THEMISQ8N1K5 641 aaPredicted RBP27.8■■■□□ 2.04
PTMS-201ENST00000309083 NOS1P29475 1434 aa27.8■■■□□ 2.04
PTMS-201ENST00000309083 FAM135BQ49AJ0 1406 aa27.8■■■□□ 2.04
PTMS-201ENST00000309083 NLRP1Q9C000 1473 aa27.78■■■□□ 2.04
PTMS-201ENST00000309083 TRPM2O94759 1503 aa27.77■■■□□ 2.04
PTMS-201ENST00000309083 ROBO1Q9Y6N7 1651 aa27.77■■■□□ 2.04
PTMS-201ENST00000309083 SPHKAPQ2M3C7 1700 aa27.76■■■□□ 2.03
PTMS-201ENST00000309083 ERVK-7P63135 1459 aa27.76■■■□□ 2.03
PTMS-201ENST00000309083 CCDC144AA2RUR9 1427 aa27.73■■■□□ 2.03
PTMS-201ENST00000309083 SLC52A1Q9NWF4 448 aa27.7■■■□□ 2.02
PTMS-201ENST00000309083 TIMELESSQ9UNS1 1208 aa27.65■■■□□ 2.02
PTMS-201ENST00000309083 SIN3AQ96ST3 1273 aa27.64■■■□□ 2.02
PTMS-201ENST00000309083 PIK3C2BO00750 1634 aa27.63■■■□□ 2.01
PTMS-201ENST00000309083 LRP6O75581 1613 aa27.63■■■□□ 2.01
PTMS-201ENST00000309083 CLTCL1P53675 1640 aa27.62■■■□□ 2.01
PTMS-201ENST00000309083 UBR1Q8IWV7 1749 aa27.61■■■□□ 2.01
PTMS-201ENST00000309083 CFAP65Q6ZU64 1925 aaKnown RBP27.61■■■□□ 2.01
PTMS-201ENST00000309083 NEUROD1Q13562 356 aa27.59■■■□□ 2.01
PTMS-201ENST00000309083 PHLPP1O60346 1717 aa27.58■■■□□ 2.01
PTMS-201ENST00000309083 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
PTMS-201ENST00000309083 SCAF11Q99590 1463 aaKnown RBP27.57■■■□□ 2
PTMS-201ENST00000309083 IDI1Q13907 227 aa27.57■■■□□ 2
PTMS-201ENST00000309083 LTKP29376 864 aa27.55■■■□□ 2
PTMS-201ENST00000309083 TMEM94Q12767 1356 aa27.55■■■□□ 2
PTMS-201ENST00000309083 SPATA31E1Q6ZUB1 1445 aa27.55■■■□□ 2
PTMS-201ENST00000309083 TONSLQ96HA7 1378 aa27.53■■■□□ 2
PTMS-201ENST00000309083 KIF1BO60333 1816 aa27.53■■■□□ 2
PTMS-201ENST00000309083 JCADQ9P266 1359 aa27.52■■■□□ 2
PTMS-201ENST00000309083 COL16A1Q07092 1604 aaPredicted RBP27.52■■■□□ 2
PTMS-201ENST00000309083 ARHGAP23Q9P227 1491 aa27.51■■■□□ 2
PTMS-201ENST00000309083 KDM5AP29375 1690 aaKnown RBP27.51■■□□□ 1.99
PTMS-201ENST00000309083 ADGRB3O60242 1522 aa27.51■■□□□ 1.99
PTMS-201ENST00000309083 RBM33Q96EV2 1170 aaKnown RBP27.5■■□□□ 1.99
PTMS-201ENST00000309083 STAC3Q96MF2 364 aa27.49■■□□□ 1.99
PTMS-201ENST00000309083 SLIT1O75093 1534 aa27.48■■□□□ 1.99
PTMS-201ENST00000309083 TMEM131LA2VDJ0 1609 aa27.47■■□□□ 1.99
PTMS-201ENST00000309083 RPGRIP1LQ68CZ1 1315 aa27.46■■□□□ 1.99
PTMS-201ENST00000309083 STAG3Q9UJ98 1225 aa27.45■■□□□ 1.98
PTMS-201ENST00000309083 CHGAP10645 457 aaKnown RBP27.44■■□□□ 1.98
PTMS-201ENST00000309083 L3MBTL2Q969R5 705 aa27.43■■□□□ 1.98
PTMS-201ENST00000309083 RGL3Q3MIN7 710 aa27.41■■□□□ 1.98
PTMS-201ENST00000309083 ZNF772Q68DY9 489 aaPredicted RBP27.41■■□□□ 1.98
PTMS-201ENST00000309083 CDK12Q9NYV4 1490 aaPredicted RBP27.4■■□□□ 1.98
PTMS-201ENST00000309083 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
PTMS-201ENST00000309083 ZNF326Q5BKZ1 582 aaKnown RBP27.38■■□□□ 1.97
PTMS-201ENST00000309083 RXRBP28702 533 aa27.36■■□□□ 1.97
PTMS-201ENST00000309083 HDGFP51858 240 aaKnown RBP27.36■■□□□ 1.97
PTMS-201ENST00000309083 PPP1R15AO75807 674 aaPredicted RBP27.35■■□□□ 1.97
PTMS-201ENST00000309083 ZFYVE9O95405 1425 aa27.34■■□□□ 1.97
PTMS-201ENST00000309083 MYOM2P54296 1465 aa27.34■■□□□ 1.97
PTMS-201ENST00000309083 DCAF11Q8TEB1 546 aa27.34■■□□□ 1.97
PTMS-201ENST00000309083 SETBP1Q9Y6X0 1596 aa27.34■■□□□ 1.97
PTMS-201ENST00000309083 TMEM2Q9UHN6 1383 aa27.34■■□□□ 1.97
PTMS-201ENST00000309083 SHPRHQ149N8 1683 aa27.33■■□□□ 1.97
PTMS-201ENST00000309083 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.33■■□□□ 1.97
PTMS-201ENST00000309083 NWD1Q149M9 1564 aa27.33■■□□□ 1.97
PTMS-201ENST00000309083 NEXMIFQ5QGS0 1516 aa27.32■■□□□ 1.96
PTMS-201ENST00000309083 VGFO15240 615 aaPredicted RBP27.32■■□□□ 1.96
PTMS-201ENST00000309083 MEX3CQ5U5Q3 659 aaKnown RBP27.32■■□□□ 1.96
PTMS-201ENST00000309083 SPATA31A6Q5VVP1 1343 aa27.32■■□□□ 1.96
PTMS-201ENST00000309083 RGS12O14924 1447 aa27.32■■□□□ 1.96
PTMS-201ENST00000309083 IFT172Q9UG01 1749 aa27.31■■□□□ 1.96
PTMS-201ENST00000309083 KCNA6P17658 529 aa27.31■■□□□ 1.96
PTMS-201ENST00000309083 PROSER2Q86WR7 435 aaPredicted RBP27.31■■□□□ 1.96
PTMS-201ENST00000309083 SLAIN2Q9P270 581 aa27.31■■□□□ 1.96
PTMS-201ENST00000309083 MYO5BQ9ULV0 1848 aa27.31■■□□□ 1.96
PTMS-201ENST00000309083 RIMS2Q9UQ26 1411 aa27.3■■□□□ 1.96
PTMS-201ENST00000309083 PPLO60437 1756 aa27.3■■□□□ 1.96
PTMS-201ENST00000309083 NKTRP30414 1462 aaKnown RBP27.26■■□□□ 1.95
PTMS-201ENST00000309083 NRXN1Q9ULB1 1477 aa27.26■■□□□ 1.95
PTMS-201ENST00000309083 KDM2AQ9Y2K7 1162 aa27.25■■□□□ 1.95
PTMS-201ENST00000309083 PRAG1Q86YV5 1406 aa27.24■■□□□ 1.95
PTMS-201ENST00000309083 MSH6P52701 1360 aa27.24■■□□□ 1.95
PTMS-201ENST00000309083 EID1Q9Y6B2 187 aa27.24■■□□□ 1.95
PTMS-201ENST00000309083 DIP2AQ14689 1571 aa27.23■■□□□ 1.95
PTMS-201ENST00000309083 SLC26A8Q96RN1 970 aa27.23■■□□□ 1.95
PTMS-201ENST00000309083 AHDC1Q5TGY3 1603 aaPredicted RBP27.23■■□□□ 1.95
PTMS-201ENST00000309083 EP400Q96L91 3159 aa27.2■■□□□ 1.95
PTMS-201ENST00000309083 ADGRF5Q8IZF2 1346 aa27.19■■□□□ 1.94
PTMS-201ENST00000309083 PIK3C2GO75747 1445 aa27.19■■□□□ 1.94
PTMS-201ENST00000309083 AFF2P51816 1311 aa27.17■■□□□ 1.94
PTMS-201ENST00000309083 NBPF8Q3BBV2 869 aa27.17■■□□□ 1.94
PTMS-201ENST00000309083 PLEKHG1Q9ULL1 1385 aa27.16■■□□□ 1.94
PTMS-201ENST00000309083 RALGAPBQ86X10 1494 aa27.13■■□□□ 1.93
PTMS-201ENST00000309083 KIAA1210Q9ULL0 1709 aa27.13■■□□□ 1.93
PTMS-201ENST00000309083 NUTM2DQ5VT03 806 aaPredicted RBP27.12■■□□□ 1.93
PTMS-201ENST00000309083 C14orf93Q9H972 538 aaKnown RBP27.12■■□□□ 1.93
PTMS-201ENST00000309083 LAMC1P11047 1609 aa27.12■■□□□ 1.93
PTMS-201ENST00000309083 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
PTMS-201ENST00000309083 NUTM2BA6NNL0 878 aaPredicted RBP27.11■■□□□ 1.93
PTMS-201ENST00000309083 NUTM2EB1AL46 878 aaPredicted RBP27.11■■□□□ 1.93
PTMS-201ENST00000309083 NUTM2AQ8IVF1 878 aaPredicted RBP27.11■■□□□ 1.93
PTMS-201ENST00000309083 TRPM1Q7Z4N2 1603 aa27.09■■□□□ 1.93
PTMS-201ENST00000309083 ZRANB1Q9UGI0 708 aa27.09■■□□□ 1.93
PTMS-201ENST00000309083 GPRASP1Q5JY77 1395 aa27.08■■□□□ 1.93
PTMS-201ENST00000309083 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms