RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 ADAMTS12P58397 1594 aa14.45□□□□□ -0.1
PCDHGC3-201ENST00000308177 ERBINQ96RT1 1412 aa14.45□□□□□ -0.1
PCDHGC3-201ENST00000308177 CENPQQ7L2Z9 268 aaPredicted RBP14.44□□□□□ -0.1
PCDHGC3-201ENST00000308177 MAPKBP1O60336 1514 aa14.44□□□□□ -0.1
PCDHGC3-201ENST00000308177 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
PCDHGC3-201ENST00000308177 ELL2O00472 640 aaPredicted RBP14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 MTHFSP49914 203 aa14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 CHMP4AQ9BY43 222 aa14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 ZKSCAN2Q63HK3 967 aa14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 SLC12A5Q9H2X9 1139 aa14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 NCLP19338 710 aaKnown RBP14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
PCDHGC3-201ENST00000308177 CFAP44Q96MT7 982 aa14.42□□□□□ -0.1
PCDHGC3-201ENST00000308177 CD109Q6YHK3 1445 aa14.42□□□□□ -0.1
PCDHGC3-201ENST00000308177 RIPK4P57078 832 aa14.41□□□□□ -0.1
PCDHGC3-201ENST00000308177 CDCA7LQ96GN5 454 aa14.41□□□□□ -0.1
PCDHGC3-201ENST00000308177 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
PCDHGC3-201ENST00000308177 ADGRL1O94910 1474 aa14.41□□□□□ -0.1
PCDHGC3-201ENST00000308177 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
PCDHGC3-201ENST00000308177 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
PCDHGC3-201ENST00000308177 PRAM1Q96QH2 718 aa14.4□□□□□ -0.1
PCDHGC3-201ENST00000308177 SLC4A10Q6U841 1118 aa14.39□□□□□ -0.11
PCDHGC3-201ENST00000308177 KIAA0556O60303 1618 aa14.39□□□□□ -0.11
PCDHGC3-201ENST00000308177 CFAP43Q8NDM7 1665 aa14.39□□□□□ -0.11
PCDHGC3-201ENST00000308177 PDE4AP27815 886 aa14.39□□□□□ -0.11
PCDHGC3-201ENST00000308177 WDR62O43379 1518 aa14.37□□□□□ -0.11
PCDHGC3-201ENST00000308177 KCNJ4P48050 445 aa14.37□□□□□ -0.11
PCDHGC3-201ENST00000308177 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
PCDHGC3-201ENST00000308177 HMMRO75330 724 aa14.37□□□□□ -0.11
PCDHGC3-201ENST00000308177 TCOF1Q13428 1488 aaKnown RBP14.37□□□□□ -0.11
PCDHGC3-201ENST00000308177 SPRYD3Q8NCJ5 442 aa14.37□□□□□ -0.11
PCDHGC3-201ENST00000308177 HMOX1P09601 288 aa14.35□□□□□ -0.11
PCDHGC3-201ENST00000308177 MCCP23508 829 aa14.35□□□□□ -0.11
PCDHGC3-201ENST00000308177 MFAP1P55081 439 aaKnown RBP14.35□□□□□ -0.11
PCDHGC3-201ENST00000308177 FANCAO15360 1455 aa14.35□□□□□ -0.11
PCDHGC3-201ENST00000308177 TXNDC2Q86VQ3 553 aa14.34□□□□□ -0.11
PCDHGC3-201ENST00000308177 FAM161AQ3B820 660 aa14.34□□□□□ -0.11
PCDHGC3-201ENST00000308177 DZIP1LQ8IYY4 767 aaKnown RBP14.34□□□□□ -0.11
PCDHGC3-201ENST00000308177 ABCA5Q8WWZ7 1642 aa14.33□□□□□ -0.12
PCDHGC3-201ENST00000308177 DDX19BQ9UMR2 479 aa14.33□□□□□ -0.12
PCDHGC3-201ENST00000308177 EIF4G3O43432 1585 aaKnown RBP14.33□□□□□ -0.12
PCDHGC3-201ENST00000308177 PLCH2O75038 1416 aa14.32□□□□□ -0.12
PCDHGC3-201ENST00000308177 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-201ENST00000308177 CDK19Q9BWU1 502 aa14.32□□□□□ -0.12
PCDHGC3-201ENST00000308177 TRIM44Q96DX7 344 aaPredicted RBP14.32□□□□□ -0.12
PCDHGC3-201ENST00000308177 CABP1Q9NZU7 370 aa14.32□□□□□ -0.12
PCDHGC3-201ENST00000308177 ITSN2Q9NZM3 1697 aa14.31□□□□□ -0.12
PCDHGC3-201ENST00000308177 DISP1Q96F81 1524 aa14.31□□□□□ -0.12
PCDHGC3-201ENST00000308177 GNAI1P63096 354 aa14.31□□□□□ -0.12
PCDHGC3-201ENST00000308177 FGD1P98174 961 aa14.31□□□□□ -0.12
PCDHGC3-201ENST00000308177 HDAC5Q9UQL6 1122 aa14.31□□□□□ -0.12
PCDHGC3-201ENST00000308177 DHX29Q7Z478 1369 aaKnown RBP14.3□□□□□ -0.12
PCDHGC3-201ENST00000308177 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
PCDHGC3-201ENST00000308177 PSME1Q06323 249 aa14.3□□□□□ -0.12
PCDHGC3-201ENST00000308177 NUP160Q12769 1436 aa14.3□□□□□ -0.12
PCDHGC3-201ENST00000308177 SMG6Q86US8 1419 aaKnown RBP14.29□□□□□ -0.12
PCDHGC3-201ENST00000308177 TPRNQ4KMQ1 711 aa14.29□□□□□ -0.12
PCDHGC3-201ENST00000308177 PANK1Q8TE04 598 aa14.29□□□□□ -0.12
PCDHGC3-201ENST00000308177 KIF16BQ96L93 1317 aa14.29□□□□□ -0.12
PCDHGC3-201ENST00000308177 ANKRD45Q5TZF3 282 aa14.28□□□□□ -0.12
PCDHGC3-201ENST00000308177 KIAA1211Q6ZU35 1233 aa14.28□□□□□ -0.12
PCDHGC3-201ENST00000308177 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
PCDHGC3-201ENST00000308177 TEFQ10587 303 aa14.28□□□□□ -0.12
PCDHGC3-201ENST00000308177 ZNF330Q9Y3S2 320 aaPredicted RBP14.28□□□□□ -0.12
PCDHGC3-201ENST00000308177 FANCIQ9NVI1 1328 aa14.27□□□□□ -0.12
PCDHGC3-201ENST00000308177 NLRP6P59044 892 aa14.27□□□□□ -0.13
PCDHGC3-201ENST00000308177 ATAD2Q6PL18 1390 aa14.27□□□□□ -0.13
PCDHGC3-201ENST00000308177 SYCP2Q9BX26 1530 aa14.27□□□□□ -0.13
PCDHGC3-201ENST00000308177 PRKAR2BP31323 418 aa14.27□□□□□ -0.13
PCDHGC3-201ENST00000308177 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
PCDHGC3-201ENST00000308177 IDI1Q13907 227 aa14.26□□□□□ -0.13
PCDHGC3-201ENST00000308177 DEKP35659 375 aaKnown RBP14.26□□□□□ -0.13
PCDHGC3-201ENST00000308177 THEMISQ8N1K5 641 aaPredicted RBP14.26□□□□□ -0.13
PCDHGC3-201ENST00000308177 AAMPQ13685 434 aa14.26□□□□□ -0.13
PCDHGC3-201ENST00000308177 SAMD9Q5K651 1589 aa14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 TRIM6-TRIM34B2RNG4 842 aa14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 PBRM1Q86U86 1689 aa14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 NPHP1O15259 732 aa14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 RTEL1-TNFRSF6BF6WH68 1400 aa14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 NSD3Q9BZ95 1437 aa14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 DENND4BO75064 1496 aaPredicted RBP14.25□□□□□ -0.13
PCDHGC3-201ENST00000308177 ZNF692Q9BU19 519 aaPredicted RBP14.24□□□□□ -0.13
PCDHGC3-201ENST00000308177 NUTM2GQ5VZR2 741 aa14.24□□□□□ -0.13
PCDHGC3-201ENST00000308177 SLC26A8Q96RN1 970 aa14.23□□□□□ -0.13
PCDHGC3-201ENST00000308177 DUOX2Q9NRD8 1548 aa14.23□□□□□ -0.13
PCDHGC3-201ENST00000308177 ASXL2Q76L83 1435 aa14.23□□□□□ -0.13
PCDHGC3-201ENST00000308177 SCAF11Q99590 1463 aaKnown RBP14.23□□□□□ -0.13
PCDHGC3-201ENST00000308177 FAM135AQ9P2D6 1515 aa14.23□□□□□ -0.13
PCDHGC3-201ENST00000308177 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
PCDHGC3-201ENST00000308177 KDM5BQ9UGL1 1544 aa14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 NAP1L2Q9ULW6 460 aaPredicted RBP14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 FBXO31Q5XUX0 539 aaPredicted RBP14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 TSPYL4Q9UJ04 414 aa14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 BCAR3O75815 825 aa14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 PDE3AQ14432 1141 aa14.22□□□□□ -0.13
PCDHGC3-201ENST00000308177 EIF2S2P20042 333 aaKnown RBP14.21□□□□□ -0.13
PCDHGC3-201ENST00000308177 WDR63Q8IWG1 891 aa14.21□□□□□ -0.13
PCDHGC3-201ENST00000308177 GPATCH3Q96I76 525 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms