RNA–Protein interactions for RNA: ENST00000307731.1

CDC40-201, Transcript of cell division cycle 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC40, Length 3,848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-201ENST00000307731 SLC26A8Q96RN1 970 aa10.14□□□□□ -0.79
CDC40-201ENST00000307731 NPM3O75607 178 aaKnown RBP10.13□□□□□ -0.79
CDC40-201ENST00000307731 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
CDC40-201ENST00000307731 TRPM2O94759 1503 aa10.12□□□□□ -0.79
CDC40-201ENST00000307731 CENPJQ9HC77 1338 aaPredicted RBP10.12□□□□□ -0.79
CDC40-201ENST00000307731 ERVK-7P63135 1459 aa10.12□□□□□ -0.79
CDC40-201ENST00000307731 MINK1Q8N4C8 1332 aaPredicted RBP10.12□□□□□ -0.79
CDC40-201ENST00000307731 CLTCQ00610 1675 aaKnown RBP10.12□□□□□ -0.79
CDC40-201ENST00000307731 ARHGAP31Q2M1Z3 1444 aa10.12□□□□□ -0.79
CDC40-201ENST00000307731 RIMS2Q9UQ26 1411 aa10.12□□□□□ -0.79
CDC40-201ENST00000307731 E9PCH4 1651 aa10.11□□□□□ -0.79
CDC40-201ENST00000307731 RNF17Q9BXT8 1623 aaKnown RBP10.11□□□□□ -0.79
CDC40-201ENST00000307731 CAMSAP1Q5T5Y3 1602 aa10.11□□□□□ -0.79
CDC40-201ENST00000307731 PLA2R1Q13018 1463 aa10.1□□□□□ -0.79
CDC40-201ENST00000307731 PTPRTO14522 1441 aa10.1□□□□□ -0.79
CDC40-201ENST00000307731 SPHKAPQ2M3C7 1700 aa10.1□□□□□ -0.79
CDC40-201ENST00000307731 KNSTRNQ9Y448 316 aa10.1□□□□□ -0.79
CDC40-201ENST00000307731 LMTK2Q8IWU2 1503 aa10.1□□□□□ -0.79
CDC40-201ENST00000307731 KIF1BO60333 1816 aa10.1□□□□□ -0.79
CDC40-201ENST00000307731 UHRF1BP1Q6BDS2 1440 aa10.09□□□□□ -0.79
CDC40-201ENST00000307731 NUTM2FA1L443 756 aa10.09□□□□□ -0.79
CDC40-201ENST00000307731 PRAG1Q86YV5 1406 aa10.09□□□□□ -0.79
CDC40-201ENST00000307731 ZC3H13Q5T200 1668 aaKnown RBP10.08□□□□□ -0.8
CDC40-201ENST00000307731 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
CDC40-201ENST00000307731 DEPDC5O75140 1603 aa10.08□□□□□ -0.8
CDC40-201ENST00000307731 PRAM1Q96QH2 718 aa10.08□□□□□ -0.8
CDC40-201ENST00000307731 C14orf93Q9H972 538 aaKnown RBP10.07□□□□□ -0.8
CDC40-201ENST00000307731 CLTCL1P53675 1640 aa10.07□□□□□ -0.8
CDC40-201ENST00000307731 CENPBP07199 599 aaPredicted RBP10.07□□□□□ -0.8
CDC40-201ENST00000307731 REREQ9P2R6 1566 aa10.07□□□□□ -0.8
CDC40-201ENST00000307731 PLEKHG5O94827 1062 aa10.07□□□□□ -0.8
CDC40-201ENST00000307731 HSPA2P54652 639 aa10.07□□□□□ -0.8
CDC40-201ENST00000307731 SPATA31E1Q6ZUB1 1445 aa10.06□□□□□ -0.8
CDC40-201ENST00000307731 RALGAPBQ86X10 1494 aa10.06□□□□□ -0.8
CDC40-201ENST00000307731 MROH1Q8NDA8 1641 aa10.05□□□□□ -0.8
CDC40-201ENST00000307731 HDGFL2Q7Z4V5 671 aaPredicted RBP10.05□□□□□ -0.8
CDC40-201ENST00000307731 MIER1Q8N108 512 aa10.05□□□□□ -0.8
CDC40-201ENST00000307731 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
CDC40-201ENST00000307731 NCBP3Q53F19 620 aaKnown RBP10.05□□□□□ -0.8
CDC40-201ENST00000307731 VWDEQ8N2E2 1590 aa10.05□□□□□ -0.8
CDC40-201ENST00000307731 TMEM2Q9UHN6 1383 aa10.05□□□□□ -0.8
CDC40-201ENST00000307731 NLRP1Q9C000 1473 aa10.04□□□□□ -0.8
CDC40-201ENST00000307731 KIF7Q2M1P5 1343 aa10.04□□□□□ -0.8
CDC40-201ENST00000307731 CC2D1BQ5T0F9 858 aaKnown RBP10.04□□□□□ -0.8
CDC40-201ENST00000307731 LMOD2Q6P5Q4 547 aa10.04□□□□□ -0.8
CDC40-201ENST00000307731 PROSER2Q86WR7 435 aaPredicted RBP10.04□□□□□ -0.8
CDC40-201ENST00000307731 RIMS1Q86UR5 1692 aaKnown RBP10.04□□□□□ -0.8
CDC40-201ENST00000307731 FER1L4A9Z1Z3 1794 aa10.04□□□□□ -0.8
CDC40-201ENST00000307731 CCDC7Q96M83 1385 aa10.04□□□□□ -0.8
CDC40-201ENST00000307731 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
CDC40-201ENST00000307731 MRS2Q9HD23 443 aa10.03□□□□□ -0.8
CDC40-201ENST00000307731 TERF2IPQ9NYB0 399 aa10.03□□□□□ -0.8
CDC40-201ENST00000307731 AMOTL2Q9Y2J4 779 aa10.03□□□□□ -0.8
CDC40-201ENST00000307731 CABP2Q9NPB3 220 aa10.02□□□□□ -0.8
CDC40-201ENST00000307731 WAPLQ7Z5K2 1190 aa10.02□□□□□ -0.81
CDC40-201ENST00000307731 PREX1Q8TCU6 1659 aa10.02□□□□□ -0.81
CDC40-201ENST00000307731 NCKAP5LQ9HCH0 1330 aa10.02□□□□□ -0.81
CDC40-201ENST00000307731 NGDNQ8NEJ9 315 aaKnown RBP10.02□□□□□ -0.81
CDC40-201ENST00000307731 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
CDC40-201ENST00000307731 LTKP29376 864 aa10.01□□□□□ -0.81
CDC40-201ENST00000307731 MADDQ8WXG6 1647 aa10.01□□□□□ -0.81
CDC40-201ENST00000307731 TNNT2P45379 298 aaPredicted RBP10.01□□□□□ -0.81
CDC40-201ENST00000307731 PANK3Q9H999 370 aa10.01□□□□□ -0.81
CDC40-201ENST00000307731 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
CDC40-201ENST00000307731 ZBTB7CA1YPR0 619 aa10□□□□□ -0.81
CDC40-201ENST00000307731 FAM9BQ8IZU0 186 aa10□□□□□ -0.81
CDC40-201ENST00000307731 A2ML1A8K2U0 1454 aa10□□□□□ -0.81
CDC40-201ENST00000307731 PAK3O75914 559 aaPredicted RBP9.99□□□□□ -0.81
CDC40-201ENST00000307731 ADGRB3O60242 1522 aa9.99□□□□□ -0.81
CDC40-201ENST00000307731 PELP1Q8IZL8 1130 aaKnown RBP9.99□□□□□ -0.81
CDC40-201ENST00000307731 MYOM2P54296 1465 aa9.99□□□□□ -0.81
CDC40-201ENST00000307731 KTN1Q86UP2 1357 aaKnown RBP9.99□□□□□ -0.81
CDC40-201ENST00000307731 ATF3P18847 181 aa9.99□□□□□ -0.81
CDC40-201ENST00000307731 PTPRMP28827 1452 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 PPM1GO15355 546 aaPredicted RBP9.98□□□□□ -0.81
CDC40-201ENST00000307731 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
CDC40-201ENST00000307731 CDK19Q9BWU1 502 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 TBX22Q9Y458 520 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 SYNMO15061 1565 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 NEFMP07197 916 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 MORC1Q86VD1 984 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 SOX12O15370 315 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 RBM33Q96EV2 1170 aaKnown RBP9.98□□□□□ -0.81
CDC40-201ENST00000307731 PIK3C2BO00750 1634 aa9.98□□□□□ -0.81
CDC40-201ENST00000307731 BCORL1Q5H9F3 1711 aa9.97□□□□□ -0.81
CDC40-201ENST00000307731 SPATA31D1Q6ZQQ2 1576 aa9.97□□□□□ -0.81
CDC40-201ENST00000307731 YTHDC2Q9H6S0 1430 aaKnown RBP9.97□□□□□ -0.81
CDC40-201ENST00000307731 WDR43Q15061 677 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDC40-201ENST00000307731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.97□□□□□ -0.816e-7■■■■□ 23.3
CDC40-201ENST00000307731 DMRT2Q9Y5R5 561 aa9.97□□□□□ -0.81
CDC40-201ENST00000307731 SETD1BQ9UPS6 1966 aaKnown RBP9.97□□□□□ -0.81
CDC40-201ENST00000307731 C11orf95C9JLR9 678 aaPredicted RBP9.96□□□□□ -0.82
CDC40-201ENST00000307731 CFAP53Q96M91 514 aa9.96□□□□□ -0.82
CDC40-201ENST00000307731 PLEKHG1Q9ULL1 1385 aa9.95□□□□□ -0.82
CDC40-201ENST00000307731 SLC12A5Q9H2X9 1139 aa9.95□□□□□ -0.82
CDC40-201ENST00000307731 PIK3C2GO75747 1445 aa9.95□□□□□ -0.82
CDC40-201ENST00000307731 LRPPRCP42704 1394 aaKnown RBP9.95□□□□□ -0.82
CDC40-201ENST00000307731 GPRASP1Q5JY77 1395 aa9.95□□□□□ -0.82
CDC40-201ENST00000307731 ATAD2Q6PL18 1390 aa9.94□□□□□ -0.82
CDC40-201ENST00000307731 KCNA6P17658 529 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms