RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 BCORL1Q5H9F3 1711 aa21.15■□□□□ 0.98
CCDC8-201ENST00000307522 PANK3Q9H999 370 aa21.14■□□□□ 0.97
CCDC8-201ENST00000307522 GZF1Q9H116 711 aaPredicted RBP21.13■□□□□ 0.97
CCDC8-201ENST00000307522 UGGT1Q9NYU2 1555 aa21.13■□□□□ 0.97
CCDC8-201ENST00000307522 MS4A1P11836 297 aa21.13■□□□□ 0.97
CCDC8-201ENST00000307522 A2MP01023 1474 aa21.13■□□□□ 0.97
CCDC8-201ENST00000307522 GLIPR1L2Q4G1C9 344 aa21.12■□□□□ 0.97
CCDC8-201ENST00000307522 DISP3Q9P2K9 1392 aa21.11■□□□□ 0.97
CCDC8-201ENST00000307522 ABCC1P33527 1531 aa21.11■□□□□ 0.97
CCDC8-201ENST00000307522 ADGRF5Q8IZF2 1346 aa21.11■□□□□ 0.97
CCDC8-201ENST00000307522 UHRF1BP1LA0JNW5 1464 aa21.1■□□□□ 0.97
CCDC8-201ENST00000307522 SPRYD3Q8NCJ5 442 aa21.1■□□□□ 0.97
CCDC8-201ENST00000307522 TRAK1Q9UPV9 953 aa21.09■□□□□ 0.97
CCDC8-201ENST00000307522 HSP90AA2PQ14568 343 aaPredicted RBP21.09■□□□□ 0.97
CCDC8-201ENST00000307522 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.97
CCDC8-201ENST00000307522 DHX29Q7Z478 1369 aaKnown RBP21.08■□□□□ 0.97
CCDC8-201ENST00000307522 PRAG1Q86YV5 1406 aa21.08■□□□□ 0.96
CCDC8-201ENST00000307522 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
CCDC8-201ENST00000307522 KANK1Q14678 1352 aa21.06■□□□□ 0.96
CCDC8-201ENST00000307522 PANK2Q9BZ23 570 aa21.06■□□□□ 0.96
CCDC8-201ENST00000307522 STK26Q9P289 416 aa21.06■□□□□ 0.96
CCDC8-201ENST00000307522 TESK2Q96S53 571 aa21.04■□□□□ 0.96
CCDC8-201ENST00000307522 RALGAPBQ86X10 1494 aa21.02■□□□□ 0.96
CCDC8-201ENST00000307522 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
CCDC8-201ENST00000307522 PNNQ9H307 717 aaKnown RBP21.02■□□□□ 0.95
CCDC8-201ENST00000307522 C8orf34Q49A92 452 aa21.01■□□□□ 0.95
CCDC8-201ENST00000307522 TMF1P82094 1093 aa21■□□□□ 0.95
CCDC8-201ENST00000307522 ERBINQ96RT1 1412 aa21■□□□□ 0.95
CCDC8-201ENST00000307522 ATP7AQ04656 1500 aa21■□□□□ 0.95
CCDC8-201ENST00000307522 ZFYVE16Q7Z3T8 1539 aa21■□□□□ 0.95
CCDC8-201ENST00000307522 HSP90AA1P07900 732 aaKnown RBP21■□□□□ 0.95
CCDC8-201ENST00000307522 PODXL2Q9NZ53 605 aa21■□□□□ 0.95
CCDC8-201ENST00000307522 KDM5CP41229 1560 aa20.99■□□□□ 0.95
CCDC8-201ENST00000307522 KDM5DQ9BY66 1539 aa20.99■□□□□ 0.95
CCDC8-201ENST00000307522 UHRF1BP1Q6BDS2 1440 aa20.98■□□□□ 0.95
CCDC8-201ENST00000307522 ATP10AO60312 1499 aa20.97■□□□□ 0.95
CCDC8-201ENST00000307522 FAM161AQ3B820 660 aa20.97■□□□□ 0.95
CCDC8-201ENST00000307522 A0A0U1RQG5 324 aaPredicted RBP20.96■□□□□ 0.95
CCDC8-201ENST00000307522 ARID3AQ99856 593 aa20.94■□□□□ 0.94
CCDC8-201ENST00000307522 SEC24BO95487 1268 aa20.93■□□□□ 0.94
CCDC8-201ENST00000307522 YEATS2Q9ULM3 1422 aa20.93■□□□□ 0.94
CCDC8-201ENST00000307522 STAG3Q9UJ98 1225 aa20.93■□□□□ 0.94
CCDC8-201ENST00000307522 MAST1Q9Y2H9 1570 aa20.92■□□□□ 0.94
CCDC8-201ENST00000307522 XRCC6P12956 609 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC8-201ENST00000307522 KNSTRNQ9Y448 316 aa20.91■□□□□ 0.94
CCDC8-201ENST00000307522 PLXNC1O60486 1568 aa20.9■□□□□ 0.94
CCDC8-201ENST00000307522 PER1O15534 1290 aaPredicted RBP20.9■□□□□ 0.94
CCDC8-201ENST00000307522 UNC13BO14795 1591 aa20.9■□□□□ 0.94
CCDC8-201ENST00000307522 IDI1Q13907 227 aa20.89■□□□□ 0.93
CCDC8-201ENST00000307522 CCDC146Q8IYE0 955 aa20.89■□□□□ 0.93
CCDC8-201ENST00000307522 E9PCH4 1651 aa20.89■□□□□ 0.93
CCDC8-201ENST00000307522 NOS1P29475 1434 aa20.87■□□□□ 0.93
CCDC8-201ENST00000307522 IQGAP3Q86VI3 1631 aa20.87■□□□□ 0.93
CCDC8-201ENST00000307522 KTN1Q86UP2 1357 aaKnown RBP20.87■□□□□ 0.93
CCDC8-201ENST00000307522 RTEL1-TNFRSF6BF6WH68 1400 aa20.87■□□□□ 0.93
CCDC8-201ENST00000307522 MYBBP1AQ9BQG0 1328 aaKnown RBP20.86■□□□□ 0.93
CCDC8-201ENST00000307522 SLC12A5Q9H2X9 1139 aa20.86■□□□□ 0.93
CCDC8-201ENST00000307522 ZNF518AQ6AHZ1 1483 aa20.86■□□□□ 0.93
CCDC8-201ENST00000307522 ABCA9Q8IUA7 1624 aa20.85■□□□□ 0.93
CCDC8-201ENST00000307522 PRDM15P57071 1507 aaPredicted RBP20.84■□□□□ 0.93
CCDC8-201ENST00000307522 TSPOAP1O95153 1857 aa20.83■□□□□ 0.93
CCDC8-201ENST00000307522 CLTCL1P53675 1640 aa20.83■□□□□ 0.93
CCDC8-201ENST00000307522 POGZQ7Z3K3 1410 aa20.82■□□□□ 0.92
CCDC8-201ENST00000307522 KDM2BQ8NHM5 1336 aa20.82■□□□□ 0.92
CCDC8-201ENST00000307522 NPATQ14207 1427 aa20.82■□□□□ 0.92
CCDC8-201ENST00000307522 GOLGA6L3A6NEY3 463 aa20.82■□□□□ 0.92
CCDC8-201ENST00000307522 NEUROD2Q15784 382 aa20.82■□□□□ 0.92
CCDC8-201ENST00000307522 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
CCDC8-201ENST00000307522 LRPPRCP42704 1394 aaKnown RBP20.8■□□□□ 0.92
CCDC8-201ENST00000307522 NLRP13Q86W25 1043 aa20.8■□□□□ 0.92
CCDC8-201ENST00000307522 ADAMTS8Q9UP79 889 aa20.8■□□□□ 0.92
CCDC8-201ENST00000307522 KIDINS220Q9ULH0 1771 aa20.8■□□□□ 0.92
CCDC8-201ENST00000307522 L1TD1Q5T7N2 865 aaKnown RBP20.8■□□□□ 0.92
CCDC8-201ENST00000307522 CENPQQ7L2Z9 268 aaPredicted RBP20.8■□□□□ 0.92
CCDC8-201ENST00000307522 TRPM1Q7Z4N2 1603 aa20.79■□□□□ 0.92
CCDC8-201ENST00000307522 RRP9O43818 475 aaKnown RBP20.79■□□□□ 0.92
CCDC8-201ENST00000307522 RALBP1Q15311 655 aa20.79■□□□□ 0.92
CCDC8-201ENST00000307522 ERBB4Q15303 1308 aa20.78■□□□□ 0.92
CCDC8-201ENST00000307522 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
CCDC8-201ENST00000307522 MAGI2Q86UL8 1455 aa20.77■□□□□ 0.92
CCDC8-201ENST00000307522 CARD14Q9BXL6 1004 aa20.76■□□□□ 0.91
CCDC8-201ENST00000307522 RBM10P98175 930 aaKnown RBP20.76■□□□□ 0.91
CCDC8-201ENST00000307522 INO80Q9ULG1 1556 aaPredicted RBP20.75■□□□□ 0.91
CCDC8-201ENST00000307522 USP19O94966 1318 aa20.75■□□□□ 0.91
CCDC8-201ENST00000307522 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
CCDC8-201ENST00000307522 GPRASP1Q5JY77 1395 aa20.75■□□□□ 0.91
CCDC8-201ENST00000307522 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
CCDC8-201ENST00000307522 CLCN1P35523 988 aa20.74■□□□□ 0.91
CCDC8-201ENST00000307522 PTPRTO14522 1441 aa20.73■□□□□ 0.91
CCDC8-201ENST00000307522 PPP2R1AP30153 589 aa20.73■□□□□ 0.91
CCDC8-201ENST00000307522 FBLN1P23142 703 aa20.73■□□□□ 0.91
CCDC8-201ENST00000307522 BRD4O60885 1362 aaPredicted RBP20.73■□□□□ 0.91
CCDC8-201ENST00000307522 CEP152O94986 1710 aa20.73■□□□□ 0.91
CCDC8-201ENST00000307522 IGHDP01880 384 aa20.72■□□□□ 0.91
CCDC8-201ENST00000307522 CEBPAP49715 358 aaPredicted RBP20.72■□□□□ 0.91
CCDC8-201ENST00000307522 SRPK2P78362 688 aaKnown RBP20.72■□□□□ 0.91
CCDC8-201ENST00000307522 WDR43Q15061 677 aaKnown RBP eCLIP20.72■□□□□ 0.91
CCDC8-201ENST00000307522 CENPJQ9HC77 1338 aaPredicted RBP20.72■□□□□ 0.91
CCDC8-201ENST00000307522 COL17A1Q9UMD9 1497 aaPredicted RBP20.72■□□□□ 0.91
CCDC8-201ENST00000307522 ESF1Q9H501 851 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms