RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SBNO2Q9Y2G9 1366 aa7.41□□□□□ -1.22
VPS50-202ENST00000305866 RRP1P56182 461 aaKnown RBP7.41□□□□□ -1.22
VPS50-202ENST00000305866 PKD2Q13563 968 aa7.41□□□□□ -1.22
VPS50-202ENST00000305866 MYT1LQ9UL68 1186 aa7.41□□□□□ -1.22
VPS50-202ENST00000305866 SIGLEC1Q9BZZ2 1709 aa7.41□□□□□ -1.22
VPS50-202ENST00000305866 KIF1BO60333 1816 aa7.41□□□□□ -1.22
VPS50-202ENST00000305866 PLEKHH1Q9ULM0 1364 aa7.41□□□□□ -1.22
VPS50-202ENST00000305866 MYBBP1AQ9BQG0 1328 aaKnown RBP7.41□□□□□ -1.22
VPS50-202ENST00000305866 MLH3Q9UHC1 1453 aa7.4□□□□□ -1.22
VPS50-202ENST00000305866 GLI2P10070 1586 aa7.4□□□□□ -1.22
VPS50-202ENST00000305866 CCDC144AA2RUR9 1427 aa7.4□□□□□ -1.23
VPS50-202ENST00000305866 FAM9BQ8IZU0 186 aa7.4□□□□□ -1.23
VPS50-202ENST00000305866 TRAPPC8Q9Y2L5 1435 aa7.4□□□□□ -1.23
VPS50-202ENST00000305866 RALBP1Q15311 655 aa7.39□□□□□ -1.23
VPS50-202ENST00000305866 CLTCQ00610 1675 aaKnown RBP7.39□□□□□ -1.23
VPS50-202ENST00000305866 ADGRB1O14514 1584 aa7.39□□□□□ -1.23
VPS50-202ENST00000305866 ARHGEF28Q8N1W1 1705 aaKnown RBP7.38□□□□□ -1.23
VPS50-202ENST00000305866 EXOC6Q8TAG9 804 aa7.38□□□□□ -1.23
VPS50-202ENST00000305866 PIK3C2GO75747 1445 aa7.38□□□□□ -1.23
VPS50-202ENST00000305866 SCAF11Q99590 1463 aaKnown RBP7.38□□□□□ -1.23
VPS50-202ENST00000305866 RICTORQ6R327 1708 aa7.38□□□□□ -1.23
VPS50-202ENST00000305866 QRICH2Q9H0J4 1663 aa7.37□□□□□ -1.23
VPS50-202ENST00000305866 C8orf34Q49A92 452 aa7.37□□□□□ -1.23
VPS50-202ENST00000305866 UGGT1Q9NYU2 1555 aa7.37□□□□□ -1.23
VPS50-202ENST00000305866 MS4A1P11836 297 aa7.37□□□□□ -1.23
VPS50-202ENST00000305866 PRKCSHP14314 528 aaPredicted RBP7.37□□□□□ -1.23
VPS50-202ENST00000305866 CAMSAP1Q5T5Y3 1602 aa7.37□□□□□ -1.23
VPS50-202ENST00000305866 SKAP1Q86WV1 359 aa7.36□□□□□ -1.23
VPS50-202ENST00000305866 ARHGAP31Q2M1Z3 1444 aa7.36□□□□□ -1.23
VPS50-202ENST00000305866 ABCC3O15438 1527 aa7.36□□□□□ -1.23
VPS50-202ENST00000305866 ERVK-7P63135 1459 aa7.36□□□□□ -1.23
VPS50-202ENST00000305866 TSPY4P0CV99 314 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 TSPY10P0CW01 314 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 ASXL1Q8IXJ9 1541 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 ST20-MTHFSA0A0A6YYL1 179 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 NCBP3Q53F19 620 aaKnown RBP7.35□□□□□ -1.23
VPS50-202ENST00000305866 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 ZFYVE9O95405 1425 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 SETD1AO15047 1707 aaKnown RBP7.35□□□□□ -1.23
VPS50-202ENST00000305866 NEO1Q92859 1461 aa7.35□□□□□ -1.23
VPS50-202ENST00000305866 PDE4AP27815 886 aa7.34□□□□□ -1.23
VPS50-202ENST00000305866 C20orf194Q5TEA3 1177 aa7.34□□□□□ -1.23
VPS50-202ENST00000305866 PDE3BQ13370 1112 aa7.34□□□□□ -1.23
VPS50-202ENST00000305866 POGZQ7Z3K3 1410 aa7.34□□□□□ -1.24
VPS50-202ENST00000305866 DUSP27Q5VZP5 1158 aa7.33□□□□□ -1.24
VPS50-202ENST00000305866 NOS1P29475 1434 aa7.33□□□□□ -1.24
VPS50-202ENST00000305866 HNRNPMP52272 730 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS50-202ENST00000305866 NBPF1Q3BBV0 1214 aa7.33□□□□□ -1.24
VPS50-202ENST00000305866 TCERG1O14776 1098 aaKnown RBP7.33□□□□□ -1.24
VPS50-202ENST00000305866 AMER1Q5JTC6 1135 aaPredicted RBP7.33□□□□□ -1.24
VPS50-202ENST00000305866 PUS7Q96PZ0 661 aaKnown RBP7.33□□□□□ -1.24
VPS50-202ENST00000305866 ANO8Q9HCE9 1232 aaPredicted RBP7.33□□□□□ -1.24
VPS50-202ENST00000305866 DIP2CQ9Y2E4 1556 aa7.32□□□□□ -1.24
VPS50-202ENST00000305866 SALL2Q9Y467 1007 aaPredicted RBP7.32□□□□□ -1.24
VPS50-202ENST00000305866 NEXMIFQ5QGS0 1516 aa7.32□□□□□ -1.24
VPS50-202ENST00000305866 PHF23Q9BUL5 403 aaPredicted RBP7.32□□□□□ -1.24
VPS50-202ENST00000305866 MYO5BQ9ULV0 1848 aa7.32□□□□□ -1.24
VPS50-202ENST00000305866 COL3A1P02461 1466 aaPredicted RBP7.32□□□□□ -1.24
VPS50-202ENST00000305866 EIF3AQ14152 1382 aaKnown RBP7.31□□□□□ -1.24
VPS50-202ENST00000305866 EFCAB2Q5VUJ9 269 aa7.31□□□□□ -1.24
VPS50-202ENST00000305866 SPINK5Q9NQ38 1064 aaPredicted RBP7.31□□□□□ -1.24
VPS50-202ENST00000305866 USP35Q9P2H5 1018 aa7.31□□□□□ -1.24
VPS50-202ENST00000305866 RCAN3Q9UKA8 241 aa7.31□□□□□ -1.24
VPS50-202ENST00000305866 KNDC1Q76NI1 1749 aa7.31□□□□□ -1.24
VPS50-202ENST00000305866 CDC42BPGQ6DT37 1551 aa7.3□□□□□ -1.24
VPS50-202ENST00000305866 SLC24A1O60721 1099 aa7.3□□□□□ -1.24
VPS50-202ENST00000305866 MED14O60244 1454 aa7.3□□□□□ -1.24
VPS50-202ENST00000305866 ADGRL1O94910 1474 aa7.3□□□□□ -1.24
VPS50-202ENST00000305866 ASXL2Q76L83 1435 aa7.29□□□□□ -1.24
VPS50-202ENST00000305866 NLRP13Q86W25 1043 aa7.29□□□□□ -1.24
VPS50-202ENST00000305866 ZMYM3Q14202 1370 aa7.29□□□□□ -1.24
VPS50-202ENST00000305866 ANTXR1Q9H6X2 564 aa7.29□□□□□ -1.24
VPS50-202ENST00000305866 AGLP35573 1532 aa7.29□□□□□ -1.24
VPS50-202ENST00000305866 TMEM131LA2VDJ0 1609 aa7.29□□□□□ -1.24
VPS50-202ENST00000305866 CARD11Q9BXL7 1154 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 N4BP2Q86UW6 1770 aaPredicted RBP7.28□□□□□ -1.24
VPS50-202ENST00000305866 DLG5Q8TDM6 1919 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 NCOA3Q9Y6Q9 1424 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 KIF20BQ96Q89 1820 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 DCAF11Q8TEB1 546 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 PREX1Q8TCU6 1659 aa7.28□□□□□ -1.24
VPS50-202ENST00000305866 CRBNQ96SW2 442 aa7.27□□□□□ -1.25
VPS50-202ENST00000305866 KANK1Q14678 1352 aa7.27□□□□□ -1.25
VPS50-202ENST00000305866 NGEFQ8N5V2 710 aa7.27□□□□□ -1.25
VPS50-202ENST00000305866 CCDC136Q96JN2 1154 aa7.27□□□□□ -1.25
VPS50-202ENST00000305866 TULP4Q9NRJ4 1543 aa7.27□□□□□ -1.25
VPS50-202ENST00000305866 DLC1Q96QB1 1528 aa7.26□□□□□ -1.25
VPS50-202ENST00000305866 NKTRP30414 1462 aaKnown RBP7.26□□□□□ -1.25
VPS50-202ENST00000305866 PLIN1O60240 522 aa7.26□□□□□ -1.25
VPS50-202ENST00000305866 NBR1Q14596 966 aa7.26□□□□□ -1.25
VPS50-202ENST00000305866 RPGRIP1LQ68CZ1 1315 aa7.25□□□□□ -1.25
VPS50-202ENST00000305866 DDIT3P35638 169 aa7.25□□□□□ -1.25
VPS50-202ENST00000305866 SLFN5Q08AF3 891 aa7.25□□□□□ -1.25
VPS50-202ENST00000305866 NPATQ14207 1427 aa7.25□□□□□ -1.25
VPS50-202ENST00000305866 POLR3AO14802 1390 aaPredicted RBP7.25□□□□□ -1.25
VPS50-202ENST00000305866 ADAMTS8Q9UP79 889 aa7.25□□□□□ -1.25
VPS50-202ENST00000305866 RIMBP3CA6NJZ7 1639 aa7.24□□□□□ -1.25
VPS50-202ENST00000305866 RIMBP3BA6NNM3 1639 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms