RNA–Protein interactions for RNA: ENST00000305510.3

CNNM3-201, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNNM3, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-201ENST00000305510 NUP160Q12769 1436 aa23.26■■□□□ 1.31
CNNM3-201ENST00000305510 ITSN2Q9NZM3 1697 aa23.26■■□□□ 1.31
CNNM3-201ENST00000305510 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
CNNM3-201ENST00000305510 LRPPRCP42704 1394 aaKnown RBP23.25■■□□□ 1.31
CNNM3-201ENST00000305510 UHRF1BP1Q6BDS2 1440 aa23.24■■□□□ 1.31
CNNM3-201ENST00000305510 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
CNNM3-201ENST00000305510 RRP9O43818 475 aaKnown RBP23.23■■□□□ 1.31
CNNM3-201ENST00000305510 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
CNNM3-201ENST00000305510 SPINK5Q9NQ38 1064 aaPredicted RBP23.22■■□□□ 1.31
CNNM3-201ENST00000305510 A2MP01023 1474 aa23.21■■□□□ 1.31
CNNM3-201ENST00000305510 COG6Q9Y2V7 657 aa23.21■■□□□ 1.31
CNNM3-201ENST00000305510 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
CNNM3-201ENST00000305510 PANK1Q8TE04 598 aa23.19■■□□□ 1.3
CNNM3-201ENST00000305510 ADGRF5Q8IZF2 1346 aa23.19■■□□□ 1.3
CNNM3-201ENST00000305510 NPM1P06748 294 aaKnown RBP eCLIP23.18■■□□□ 1.3
CNNM3-201ENST00000305510 PLA2R1Q13018 1463 aa23.18■■□□□ 1.3
CNNM3-201ENST00000305510 SCAPERQ9BY12 1400 aa23.18■■□□□ 1.3
CNNM3-201ENST00000305510 TRAPPC8Q9Y2L5 1435 aa23.18■■□□□ 1.3
CNNM3-201ENST00000305510 L1TD1Q5T7N2 865 aaKnown RBP23.17■■□□□ 1.3
CNNM3-201ENST00000305510 U2SURPO15042 1029 aaKnown RBP23.16■■□□□ 1.3
CNNM3-201ENST00000305510 AMER1Q5JTC6 1135 aaPredicted RBP23.16■■□□□ 1.3
CNNM3-201ENST00000305510 PLEKHH1Q9ULM0 1364 aa23.16■■□□□ 1.3
CNNM3-201ENST00000305510 DUSP27Q5VZP5 1158 aa23.16■■□□□ 1.3
CNNM3-201ENST00000305510 DMRT2Q9Y5R5 561 aa23.16■■□□□ 1.3
CNNM3-201ENST00000305510 A0A0U1RQG5 324 aaPredicted RBP23.15■■□□□ 1.3
CNNM3-201ENST00000305510 SLKQ9H2G2 1235 aaPredicted RBP23.15■■□□□ 1.3
CNNM3-201ENST00000305510 KANK1Q14678 1352 aa23.14■■□□□ 1.3
CNNM3-201ENST00000305510 CDC42BPAQ5VT25 1732 aa23.13■■□□□ 1.29
CNNM3-201ENST00000305510 SPRYD3Q8NCJ5 442 aa23.13■■□□□ 1.29
CNNM3-201ENST00000305510 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
CNNM3-201ENST00000305510 ADGBQ8N7X0 1667 aa23.12■■□□□ 1.29
CNNM3-201ENST00000305510 U2AF1L5P0DN76 240 aaPredicted RBP23.11■■□□□ 1.29
CNNM3-201ENST00000305510 U2AF1Q01081 240 aaKnown RBP eCLIP23.11■■□□□ 1.292e-8■□□□□ 10.9
CNNM3-201ENST00000305510 GZF1Q9H116 711 aaPredicted RBP23.11■■□□□ 1.29
CNNM3-201ENST00000305510 ABCA8O94911 1581 aa23.09■■□□□ 1.29
CNNM3-201ENST00000305510 SAMD9LQ8IVG5 1584 aa23.09■■□□□ 1.29
CNNM3-201ENST00000305510 ARHGEF12Q9NZN5 1544 aa23.08■■□□□ 1.29
CNNM3-201ENST00000305510 SHANK2Q9UPX8 1470 aa23.08■■□□□ 1.29
CNNM3-201ENST00000305510 CARD14Q9BXL6 1004 aa23.08■■□□□ 1.28
CNNM3-201ENST00000305510 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
CNNM3-201ENST00000305510 SRPK2P78362 688 aaKnown RBP23.07■■□□□ 1.28
CNNM3-201ENST00000305510 PANK2Q9BZ23 570 aa23.06■■□□□ 1.28
CNNM3-201ENST00000305510 SLFN5Q08AF3 891 aa23.05■■□□□ 1.28
CNNM3-201ENST00000305510 C8orf34Q49A92 452 aa23.05■■□□□ 1.28
CNNM3-201ENST00000305510 CENPQQ7L2Z9 268 aaPredicted RBP23.05■■□□□ 1.28
CNNM3-201ENST00000305510 STAG3Q9UJ98 1225 aa23.05■■□□□ 1.28
CNNM3-201ENST00000305510 CLCN1P35523 988 aa23.04■■□□□ 1.28
CNNM3-201ENST00000305510 MTHFSP49914 203 aa23.04■■□□□ 1.28
CNNM3-201ENST00000305510 CABP2Q9NPB3 220 aa23.04■■□□□ 1.28
CNNM3-201ENST00000305510 TNNQ9UQP3 1299 aa23.04■■□□□ 1.28
CNNM3-201ENST00000305510 CENPJQ9HC77 1338 aaPredicted RBP23.04■■□□□ 1.28
CNNM3-201ENST00000305510 XRCC6P12956 609 aaKnown RBP eCLIP23.04■■□□□ 1.281e-8■■■■■ 35.6
CNNM3-201ENST00000305510 GOLGA6L3A6NEY3 463 aa23.03■■□□□ 1.28
CNNM3-201ENST00000305510 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
CNNM3-201ENST00000305510 MAGI2Q86UL8 1455 aa23.02■■□□□ 1.28
CNNM3-201ENST00000305510 COL17A1Q9UMD9 1497 aaPredicted RBP23.02■■□□□ 1.28
CNNM3-201ENST00000305510 TCP11L2Q8N4U5 519 aa23.01■■□□□ 1.27
CNNM3-201ENST00000305510 KDM5DQ9BY66 1539 aa23■■□□□ 1.27
CNNM3-201ENST00000305510 TTC37Q6PGP7 1564 aa23■■□□□ 1.27
CNNM3-201ENST00000305510 RAPGEF3O95398 923 aa23■■□□□ 1.27
CNNM3-201ENST00000305510 IGHDP01880 384 aa23■■□□□ 1.27
CNNM3-201ENST00000305510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.99■■□□□ 1.271e-6■■■■□ 22
CNNM3-201ENST00000305510 EIF3AQ14152 1382 aaKnown RBP22.99■■□□□ 1.27
CNNM3-201ENST00000305510 E9PSI1 815 aa22.99■■□□□ 1.27
CNNM3-201ENST00000305510 GGNBP2Q9H3C7 697 aa22.98■■□□□ 1.27
CNNM3-201ENST00000305510 FTSJ3Q8IY81 847 aaKnown RBP22.97■■□□□ 1.27
CNNM3-201ENST00000305510 MLECQ14165 292 aa22.96■■□□□ 1.27
CNNM3-201ENST00000305510 TSR2Q969E8 191 aaKnown RBP22.96■■□□□ 1.27
CNNM3-201ENST00000305510 CFAP53Q96M91 514 aa22.96■■□□□ 1.27
CNNM3-201ENST00000305510 WWC1Q8IX03 1113 aa22.96■■□□□ 1.27
CNNM3-201ENST00000305510 PLCH2O75038 1416 aa22.96■■□□□ 1.27
CNNM3-201ENST00000305510 GPRASP1Q5JY77 1395 aa22.95■■□□□ 1.26
CNNM3-201ENST00000305510 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.26
CNNM3-201ENST00000305510 FBLN1P23142 703 aa22.95■■□□□ 1.26
CNNM3-201ENST00000305510 CROCC2H7BZ55 1655 aa22.94■■□□□ 1.26
CNNM3-201ENST00000305510 RBM10P98175 930 aaKnown RBP22.94■■□□□ 1.26
CNNM3-201ENST00000305510 BECN1Q14457 450 aa22.93■■□□□ 1.26
CNNM3-201ENST00000305510 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
CNNM3-201ENST00000305510 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.92■■□□□ 1.26
CNNM3-201ENST00000305510 ELL2O00472 640 aaPredicted RBP22.91■■□□□ 1.26
CNNM3-201ENST00000305510 CDC42BPBQ9Y5S2 1711 aa22.9■■□□□ 1.26
CNNM3-201ENST00000305510 ADCY10Q96PN6 1610 aa22.9■■□□□ 1.26
CNNM3-201ENST00000305510 SCAF11Q99590 1463 aaKnown RBP22.88■■□□□ 1.25
CNNM3-201ENST00000305510 UGGT1Q9NYU2 1555 aa22.88■■□□□ 1.25
CNNM3-201ENST00000305510 KDM2BQ8NHM5 1336 aa22.88■■□□□ 1.25
CNNM3-201ENST00000305510 SEC24BO95487 1268 aa22.88■■□□□ 1.25
CNNM3-201ENST00000305510 NSD3Q9BZ95 1437 aa22.87■■□□□ 1.25
CNNM3-201ENST00000305510 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
CNNM3-201ENST00000305510 ESPNB1AK53 854 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 ARHGEF5Q12774 1597 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 SOX12O15370 315 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 ITPRIPQ8IWB1 547 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 WDR7Q9Y4E6 1490 aa22.86■■□□□ 1.25
CNNM3-201ENST00000305510 UPF2Q9HAU5 1272 aaKnown RBP22.86■■□□□ 1.25
CNNM3-201ENST00000305510 MAPK8IP3Q9UPT6 1336 aa22.85■■□□□ 1.25
CNNM3-201ENST00000305510 RLBP1P12271 317 aa22.85■■□□□ 1.25
CNNM3-201ENST00000305510 RUNDC1Q96C34 613 aa22.85■■□□□ 1.25
CNNM3-201ENST00000305510 TRIM44Q96DX7 344 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms