RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 GPBP1L1Q9HC44 474 aaPredicted RBP10.33□□□□□ -0.76
CSN3-201ENST00000304954 DIXDC1Q155Q3 683 aa10.32□□□□□ -0.76
CSN3-201ENST00000304954 SMAPO00193 183 aa10.31□□□□□ -0.76
CSN3-201ENST00000304954 HRO43593 1189 aa10.31□□□□□ -0.76
CSN3-201ENST00000304954 SSTR3P32745 418 aaPredicted RBP10.31□□□□□ -0.76
CSN3-201ENST00000304954 SLF2Q8IX21 1173 aa10.31□□□□□ -0.76
CSN3-201ENST00000304954 PLSCR2Q9NRY7 297 aa10.31□□□□□ -0.76
CSN3-201ENST00000304954 FAM217BQ9NTX9 383 aaPredicted RBP10.31□□□□□ -0.76
CSN3-201ENST00000304954 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
CSN3-201ENST00000304954 CDAN1Q8IWY9 1227 aa10.3□□□□□ -0.76
CSN3-201ENST00000304954 ZFRQ96KR1 1074 aaKnown RBP10.29□□□□□ -0.76
CSN3-201ENST00000304954 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
CSN3-201ENST00000304954 ANKK1Q8NFD2 765 aa10.28□□□□□ -0.76
CSN3-201ENST00000304954 RSPH6AQ9H0K4 717 aa10.28□□□□□ -0.76
CSN3-201ENST00000304954 SWT1Q5T5J6 900 aaKnown RBP10.27□□□□□ -0.77
CSN3-201ENST00000304954 LRCH3Q96II8 777 aa10.26□□□□□ -0.77
CSN3-201ENST00000304954 REPIN1Q9BWE0 567 aaKnown RBP10.26□□□□□ -0.77
CSN3-201ENST00000304954 KRTAP3-3Q9BYR6 98 aa10.26□□□□□ -0.77
CSN3-201ENST00000304954 KRTAP3-2Q9BYR7 98 aa10.26□□□□□ -0.77
CSN3-201ENST00000304954 DDX11L8A8MPP1 907 aa10.25□□□□□ -0.77
CSN3-201ENST00000304954 MS4A1P11836 297 aa10.24□□□□□ -0.77
CSN3-201ENST00000304954 SAMD7Q7Z3H4 446 aa10.24□□□□□ -0.77
CSN3-201ENST00000304954 RDH13Q8NBN7 331 aa10.24□□□□□ -0.77
CSN3-201ENST00000304954 BEGAINQ9BUH8 593 aa10.24□□□□□ -0.77
CSN3-201ENST00000304954 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
CSN3-201ENST00000304954 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.24□□□□□ -0.77
CSN3-201ENST00000304954 CD46P15529 392 aa10.23□□□□□ -0.77
CSN3-201ENST00000304954 IL27Q8NEV9 243 aa10.23□□□□□ -0.77
CSN3-201ENST00000304954 NLRP7Q8WX94 980 aa10.23□□□□□ -0.77
CSN3-201ENST00000304954 FAM117AQ9C073 453 aa10.23□□□□□ -0.77
CSN3-201ENST00000304954 GOPCQ9HD26 462 aa10.23□□□□□ -0.77
CSN3-201ENST00000304954 NUTM1Q86Y26 1132 aa10.21□□□□□ -0.77
CSN3-201ENST00000304954 WNT2BQ93097 391 aa10.21□□□□□ -0.77
CSN3-201ENST00000304954 USP46P62068 366 aa10.2□□□□□ -0.78
CSN3-201ENST00000304954 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
CSN3-201ENST00000304954 GRIPAP1Q4V328 841 aa10.2□□□□□ -0.78
CSN3-201ENST00000304954 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
CSN3-201ENST00000304954 RNF40O75150 1001 aa10.19□□□□□ -0.78
CSN3-201ENST00000304954 GCGRP47871 477 aa10.17□□□□□ -0.78
CSN3-201ENST00000304954 PPP4CP60510 307 aa10.17□□□□□ -0.78
CSN3-201ENST00000304954 SH3D19Q5HYK7 790 aa10.17□□□□□ -0.78
CSN3-201ENST00000304954 NYAP1Q6ZVC0 841 aa10.17□□□□□ -0.78
CSN3-201ENST00000304954 TSR3Q9UJK0 312 aaKnown RBP10.17□□□□□ -0.78
CSN3-201ENST00000304954 PLEKHG3A1L390 1219 aa10.16□□□□□ -0.78
CSN3-201ENST00000304954 KDM4AO75164 1064 aa10.15□□□□□ -0.78
CSN3-201ENST00000304954 GJA5P36382 358 aa10.15□□□□□ -0.78
CSN3-201ENST00000304954 PCMTD1Q96MG8 357 aaPredicted RBP10.15□□□□□ -0.78
CSN3-201ENST00000304954 CFHP08603 1231 aa10.14□□□□□ -0.79
CSN3-201ENST00000304954 SKIV2LQ15477 1246 aaKnown RBP10.14□□□□□ -0.79
CSN3-201ENST00000304954 HPS5Q9UPZ3 1129 aa10.14□□□□□ -0.79
CSN3-201ENST00000304954 SLC10A3P09131 477 aa10.13□□□□□ -0.79
CSN3-201ENST00000304954 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
CSN3-201ENST00000304954 THSD4Q6ZMP0 1018 aa10.12□□□□□ -0.79
CSN3-201ENST00000304954 SPIRE2Q8WWL2 714 aa10.12□□□□□ -0.79
CSN3-201ENST00000304954 MYT1LQ9UL68 1186 aa10.12□□□□□ -0.79
CSN3-201ENST00000304954 TUSC1Q2TAM9 212 aa10.11□□□□□ -0.79
CSN3-201ENST00000304954 CLK2P49760 499 aaKnown RBP10.1□□□□□ -0.79
CSN3-201ENST00000304954 BCAMP50895 628 aa10.1□□□□□ -0.79
CSN3-201ENST00000304954 KCTD12Q96CX2 325 aaKnown RBP10.1□□□□□ -0.79
CSN3-201ENST00000304954 ATP1B4Q9UN42 357 aaPredicted RBP10.1□□□□□ -0.79
CSN3-201ENST00000304954 ACTN4O43707 911 aaKnown RBP10.09□□□□□ -0.79
CSN3-201ENST00000304954 ATP6V1AP38606 617 aa10.09□□□□□ -0.79
CSN3-201ENST00000304954 MYSM1Q5VVJ2 828 aa10.09□□□□□ -0.79
CSN3-201ENST00000304954 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
CSN3-201ENST00000304954 HOXA2O43364 376 aa10.07□□□□□ -0.8
CSN3-201ENST00000304954 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
CSN3-201ENST00000304954 SPTLC1O15269 473 aa10.06□□□□□ -0.8
CSN3-201ENST00000304954 RSBN1LQ6PCB5 846 aaPredicted RBP10.06□□□□□ -0.8
CSN3-201ENST00000304954 FUT2Q10981 343 aa10.05□□□□□ -0.8
CSN3-201ENST00000304954 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
CSN3-201ENST00000304954 SPNS2Q8IVW8 549 aa10.05□□□□□ -0.8
CSN3-201ENST00000304954 Q3C1V9 767 aa10.04□□□□□ -0.8
CSN3-201ENST00000304954 POLR3EQ9NVU0 708 aa10.04□□□□□ -0.8
CSN3-201ENST00000304954 PCDHB3Q9Y5E6 796 aa10.04□□□□□ -0.8
CSN3-201ENST00000304954 MOXD2PA6NHM9 499 aa10.03□□□□□ -0.8
CSN3-201ENST00000304954 SPDYE5A6NIY4 337 aa10.03□□□□□ -0.8
CSN3-201ENST00000304954 NR1I2O75469 434 aa10.03□□□□□ -0.8
CSN3-201ENST00000304954 FDX1P10109 184 aa10.03□□□□□ -0.8
CSN3-201ENST00000304954 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
CSN3-201ENST00000304954 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
CSN3-201ENST00000304954 RNF166Q96A37 237 aaPredicted RBP10.02□□□□□ -0.81
CSN3-201ENST00000304954 HCSTQ9UBK5 93 aa10.02□□□□□ -0.81
CSN3-201ENST00000304954 APLP1P51693 650 aa10.01□□□□□ -0.81
CSN3-201ENST00000304954 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.01□□□□□ -0.81
CSN3-201ENST00000304954 ZBTB3Q9H5J0 574 aa10.01□□□□□ -0.81
CSN3-201ENST00000304954 PTPN5P54829 565 aa10□□□□□ -0.81
CSN3-201ENST00000304954 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
CSN3-201ENST00000304954 MMRN1Q13201 1228 aa9.99□□□□□ -0.81
CSN3-201ENST00000304954 MORN1Q5T089 497 aa9.99□□□□□ -0.81
CSN3-201ENST00000304954 NDUFV2P19404 249 aa9.98□□□□□ -0.81
CSN3-201ENST00000304954 MTMR2Q13614 643 aa9.98□□□□□ -0.81
CSN3-201ENST00000304954 PPP2R2DQ66LE6 453 aa9.98□□□□□ -0.81
CSN3-201ENST00000304954 LIMD1Q9UGP4 676 aa9.98□□□□□ -0.81
CSN3-201ENST00000304954 NUTM2BA6NNL0 878 aaPredicted RBP9.97□□□□□ -0.81
CSN3-201ENST00000304954 NUTM2EB1AL46 878 aaPredicted RBP9.97□□□□□ -0.81
CSN3-201ENST00000304954 TMEM259Q4ZIN3 620 aa9.97□□□□□ -0.81
CSN3-201ENST00000304954 NUTM2DQ5VT03 806 aaPredicted RBP9.97□□□□□ -0.81
CSN3-201ENST00000304954 NUTM2AQ8IVF1 878 aaPredicted RBP9.97□□□□□ -0.81
CSN3-201ENST00000304954 LILRB3O75022 631 aa9.96□□□□□ -0.82
CSN3-201ENST00000304954 PROCA1Q8NCQ7 364 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms