RNA–Protein interactions for RNA: ENST00000304527.8

SH3D19-201, Transcript of SH3 domain containing 19, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SH3D19, Length 5,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-201ENST00000304527 KNSTRNQ9Y448 316 aa8.23□□□□□ -1.09
SH3D19-201ENST00000304527 PLCB2Q00722 1185 aa8.23□□□□□ -1.09
SH3D19-201ENST00000304527 CCDC136Q96JN2 1154 aa8.23□□□□□ -1.09
SH3D19-201ENST00000304527 PPP6R1Q9UPN7 881 aa8.23□□□□□ -1.09
SH3D19-201ENST00000304527 DHX37Q8IY37 1157 aaKnown RBP8.22□□□□□ -1.09
SH3D19-201ENST00000304527 ATP7AQ04656 1500 aa8.22□□□□□ -1.09
SH3D19-201ENST00000304527 MAGI2Q86UL8 1455 aa8.22□□□□□ -1.09
SH3D19-201ENST00000304527 CFAP53Q96M91 514 aa8.22□□□□□ -1.09
SH3D19-201ENST00000304527 NUDCQ9Y266 331 aa8.21□□□□□ -1.09
SH3D19-201ENST00000304527 PLA2R1Q13018 1463 aa8.21□□□□□ -1.09
SH3D19-201ENST00000304527 PDE4CQ08493 712 aa8.21□□□□□ -1.1
SH3D19-201ENST00000304527 SENP3Q9H4L4 574 aaPredicted RBP8.21□□□□□ -1.1
SH3D19-201ENST00000304527 ZFYVE16Q7Z3T8 1539 aa8.2□□□□□ -1.1
SH3D19-201ENST00000304527 TSHZ2Q9NRE2 1034 aa8.2□□□□□ -1.1
SH3D19-201ENST00000304527 CC2D1BQ5T0F9 858 aaKnown RBP8.2□□□□□ -1.1
SH3D19-201ENST00000304527 ZNF518AQ6AHZ1 1483 aa8.2□□□□□ -1.1
SH3D19-201ENST00000304527 CD109Q6YHK3 1445 aa8.2□□□□□ -1.1
SH3D19-201ENST00000304527 PNISRQ8TF01 805 aaKnown RBP8.2□□□□□ -1.1
SH3D19-201ENST00000304527 PANK3Q9H999 370 aa8.2□□□□□ -1.1
SH3D19-201ENST00000304527 PDIA4P13667 645 aaKnown RBP8.19□□□□□ -1.1
SH3D19-201ENST00000304527 BCORL1Q5H9F3 1711 aa8.19□□□□□ -1.1
SH3D19-201ENST00000304527 GGT6Q6P531 493 aa8.19□□□□□ -1.1
SH3D19-201ENST00000304527 COL17A1Q9UMD9 1497 aaPredicted RBP8.18□□□□□ -1.1
SH3D19-201ENST00000304527 ABCA9Q8IUA7 1624 aa8.18□□□□□ -1.1
SH3D19-201ENST00000304527 TRPM1Q7Z4N2 1603 aa8.18□□□□□ -1.1
SH3D19-201ENST00000304527 TRPM2O94759 1503 aa8.18□□□□□ -1.1
SH3D19-201ENST00000304527 PDE3BQ13370 1112 aa8.18□□□□□ -1.1
SH3D19-201ENST00000304527 SMG6Q86US8 1419 aaKnown RBP8.18□□□□□ -1.1
SH3D19-201ENST00000304527 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.17□□□□□ -1.1
SH3D19-201ENST00000304527 SCAF11Q99590 1463 aaKnown RBP8.17□□□□□ -1.1
SH3D19-201ENST00000304527 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
SH3D19-201ENST00000304527 CFAP74Q9C0B2 1584 aa8.17□□□□□ -1.1
SH3D19-201ENST00000304527 LAMC1P11047 1609 aa8.17□□□□□ -1.1
SH3D19-201ENST00000304527 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.16□□□□□ -1.1
SH3D19-201ENST00000304527 TESK2Q96S53 571 aa8.16□□□□□ -1.1
SH3D19-201ENST00000304527 USP35Q9P2H5 1018 aa8.16□□□□□ -1.1
SH3D19-201ENST00000304527 PRDM15P57071 1507 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-201ENST00000304527 PTPRTO14522 1441 aa8.16□□□□□ -1.1
SH3D19-201ENST00000304527 TET3O43151 1660 aa8.16□□□□□ -1.1
SH3D19-201ENST00000304527 DCAF8L1A6NGE4 600 aa8.16□□□□□ -1.1
SH3D19-201ENST00000304527 DISP3Q9P2K9 1392 aa8.16□□□□□ -1.1
SH3D19-201ENST00000304527 SALL2Q9Y467 1007 aaPredicted RBP8.16□□□□□ -1.1
SH3D19-201ENST00000304527 CCDC9Q9Y3X0 531 aaKnown RBP8.16□□□□□ -1.1
SH3D19-201ENST00000304527 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.1
SH3D19-201ENST00000304527 INO80Q9ULG1 1556 aaPredicted RBP8.15□□□□□ -1.1
SH3D19-201ENST00000304527 TMX4Q9H1E5 349 aaPredicted RBP8.15□□□□□ -1.11
SH3D19-201ENST00000304527 CFAP70Q5T0N1 1121 aa8.13□□□□□ -1.11
SH3D19-201ENST00000304527 PAXIP1Q6ZW49 1069 aaPredicted RBP8.13□□□□□ -1.11
SH3D19-201ENST00000304527 RPGRIP1LQ68CZ1 1315 aa8.13□□□□□ -1.11
SH3D19-201ENST00000304527 SPHKAPQ2M3C7 1700 aa8.13□□□□□ -1.11
SH3D19-201ENST00000304527 E9PCH4 1651 aa8.13□□□□□ -1.11
SH3D19-201ENST00000304527 SENP3-EIF4A1A0A087X0R7 540 aa8.13□□□□□ -1.11
SH3D19-201ENST00000304527 PNNQ9H307 717 aaKnown RBP8.13□□□□□ -1.11
SH3D19-201ENST00000304527 RTL5Q5HYW3 569 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-201ENST00000304527 B4GALNT3Q6L9W6 998 aa8.12□□□□□ -1.11
SH3D19-201ENST00000304527 LRPPRCP42704 1394 aaKnown RBP8.12□□□□□ -1.11
SH3D19-201ENST00000304527 PER1O15534 1290 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-201ENST00000304527 CENPJQ9HC77 1338 aaPredicted RBP8.12□□□□□ -1.11
SH3D19-201ENST00000304527 NEO1Q92859 1461 aa8.12□□□□□ -1.11
SH3D19-201ENST00000304527 RCAN3Q9UKA8 241 aa8.12□□□□□ -1.11
SH3D19-201ENST00000304527 VGFO15240 615 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-201ENST00000304527 PPM1GO15355 546 aaPredicted RBP8.11□□□□□ -1.11
SH3D19-201ENST00000304527 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
SH3D19-201ENST00000304527 MLH3Q9UHC1 1453 aa8.11□□□□□ -1.11
SH3D19-201ENST00000304527 CLTCL1P53675 1640 aa8.11□□□□□ -1.11
SH3D19-201ENST00000304527 CSB-PGBD3P0DP91 1061 aa8.11□□□□□ -1.11
SH3D19-201ENST00000304527 RBM19Q9Y4C8 960 aaKnown RBP8.11□□□□□ -1.11
SH3D19-201ENST00000304527 EFCAB6Q5THR3 1501 aa8.11□□□□□ -1.11
SH3D19-201ENST00000304527 MYOM2P54296 1465 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 MEX3CQ5U5Q3 659 aaKnown RBP8.1□□□□□ -1.11
SH3D19-201ENST00000304527 MADDQ8WXG6 1647 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
SH3D19-201ENST00000304527 INSRP06213 1382 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 ADRA2BP18089 450 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 RAPGEF3O95398 923 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 UPF2Q9HAU5 1272 aaKnown RBP8.1□□□□□ -1.11
SH3D19-201ENST00000304527 CEP152O94986 1710 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 MAPK8IP3Q9UPT6 1336 aa8.1□□□□□ -1.11
SH3D19-201ENST00000304527 VWDEQ8N2E2 1590 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 PPP2R1AP30153 589 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 TRAK1Q9UPV9 953 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 HECW2Q9P2P5 1572 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 RNF17Q9BXT8 1623 aaKnown RBP8.09□□□□□ -1.11
SH3D19-201ENST00000304527 CHMP4AQ9BY43 222 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 LMTK2Q8IWU2 1503 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 NOS1P29475 1434 aa8.09□□□□□ -1.11
SH3D19-201ENST00000304527 RRP1P56182 461 aaKnown RBP8.08□□□□□ -1.12
SH3D19-201ENST00000304527 NEURL4Q96JN8 1562 aa8.08□□□□□ -1.12
SH3D19-201ENST00000304527 KIF1BO60333 1816 aa8.08□□□□□ -1.12
SH3D19-201ENST00000304527 SLC52A1Q9NWF4 448 aa8.08□□□□□ -1.12
SH3D19-201ENST00000304527 SRPK2P78362 688 aaKnown RBP8.08□□□□□ -1.12
SH3D19-201ENST00000304527 MORC1Q86VD1 984 aa8.08□□□□□ -1.12
SH3D19-201ENST00000304527 ASXL1Q8IXJ9 1541 aa8.08□□□□□ -1.12
SH3D19-201ENST00000304527 GOLGA2Q08379 1002 aa8.07□□□□□ -1.12
SH3D19-201ENST00000304527 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
SH3D19-201ENST00000304527 HDGFL2Q7Z4V5 671 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-201ENST00000304527 THEMISQ8N1K5 641 aaPredicted RBP8.07□□□□□ -1.12
SH3D19-201ENST00000304527 NGEFQ8N5V2 710 aa8.07□□□□□ -1.12
SH3D19-201ENST00000304527 KIDINS220Q9ULH0 1771 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms