RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 ROCK2O75116 1388 aaKnown RBP19.45■□□□□ 0.7
RAB40A-201ENST00000304236 BCANQ96GW7 911 aa19.44■□□□□ 0.7
RAB40A-201ENST00000304236 TSHZ2Q9NRE2 1034 aa19.44■□□□□ 0.7
RAB40A-201ENST00000304236 ERVK-7P63135 1459 aa19.44■□□□□ 0.7
RAB40A-201ENST00000304236 SPATA31D1Q6ZQQ2 1576 aa19.44■□□□□ 0.7
RAB40A-201ENST00000304236 MYT1Q01538 1121 aa19.44■□□□□ 0.7
RAB40A-201ENST00000304236 MRS2Q9HD23 443 aa19.43■□□□□ 0.7
RAB40A-201ENST00000304236 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
RAB40A-201ENST00000304236 UNC13BO14795 1591 aa19.42■□□□□ 0.7
RAB40A-201ENST00000304236 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
RAB40A-201ENST00000304236 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
RAB40A-201ENST00000304236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
RAB40A-201ENST00000304236 KANK1Q14678 1352 aa19.41■□□□□ 0.7
RAB40A-201ENST00000304236 CCDC184Q52MB2 194 aa19.4■□□□□ 0.7
RAB40A-201ENST00000304236 PRDM15P57071 1507 aaPredicted RBP19.4■□□□□ 0.7
RAB40A-201ENST00000304236 CEP152O94986 1710 aa19.4■□□□□ 0.7
RAB40A-201ENST00000304236 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
RAB40A-201ENST00000304236 ARHGAP31Q2M1Z3 1444 aa19.4■□□□□ 0.7
RAB40A-201ENST00000304236 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.7
RAB40A-201ENST00000304236 CARD11Q9BXL7 1154 aa19.39■□□□□ 0.69
RAB40A-201ENST00000304236 MED14O60244 1454 aa19.39■□□□□ 0.69
RAB40A-201ENST00000304236 ZBED9Q6R2W3 1325 aa19.38■□□□□ 0.69
RAB40A-201ENST00000304236 DEPDC5O75140 1603 aa19.37■□□□□ 0.69
RAB40A-201ENST00000304236 CPS1P31327 1500 aa19.37■□□□□ 0.69
RAB40A-201ENST00000304236 FAM9BQ8IZU0 186 aa19.36■□□□□ 0.69
RAB40A-201ENST00000304236 CCDC144AA2RUR9 1427 aa19.35■□□□□ 0.69
RAB40A-201ENST00000304236 IQGAP3Q86VI3 1631 aa19.35■□□□□ 0.69
RAB40A-201ENST00000304236 DCAF11Q8TEB1 546 aa19.34■□□□□ 0.69
RAB40A-201ENST00000304236 DISP3Q9P2K9 1392 aa19.34■□□□□ 0.69
RAB40A-201ENST00000304236 CFAP65Q6ZU64 1925 aaKnown RBP19.33■□□□□ 0.69
RAB40A-201ENST00000304236 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
RAB40A-201ENST00000304236 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
RAB40A-201ENST00000304236 TOM1O60784 492 aa19.31■□□□□ 0.68
RAB40A-201ENST00000304236 IQGAP1P46940 1657 aa19.31■□□□□ 0.68
RAB40A-201ENST00000304236 KTN1Q86UP2 1357 aaKnown RBP19.31■□□□□ 0.68
RAB40A-201ENST00000304236 UBR1Q8IWV7 1749 aa19.3■□□□□ 0.68
RAB40A-201ENST00000304236 LMTK2Q8IWU2 1503 aa19.3■□□□□ 0.68
RAB40A-201ENST00000304236 TXNDC2Q86VQ3 553 aa19.3■□□□□ 0.68
RAB40A-201ENST00000304236 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
RAB40A-201ENST00000304236 STAG3Q9UJ98 1225 aa19.3■□□□□ 0.68
RAB40A-201ENST00000304236 TRPM1Q7Z4N2 1603 aa19.29■□□□□ 0.68
RAB40A-201ENST00000304236 PRAG1Q86YV5 1406 aa19.29■□□□□ 0.68
RAB40A-201ENST00000304236 SCAF11Q99590 1463 aaKnown RBP19.29■□□□□ 0.68
RAB40A-201ENST00000304236 EID1Q9Y6B2 187 aa19.29■□□□□ 0.68
RAB40A-201ENST00000304236 ST20-MTHFSA0A0A6YYL1 179 aa19.28■□□□□ 0.68
RAB40A-201ENST00000304236 ARHGAP23Q9P227 1491 aa19.27■□□□□ 0.68
RAB40A-201ENST00000304236 LAMC1P11047 1609 aa19.27■□□□□ 0.68
RAB40A-201ENST00000304236 LTKP29376 864 aa19.27■□□□□ 0.68
RAB40A-201ENST00000304236 SLIT1O75093 1534 aa19.27■□□□□ 0.68
RAB40A-201ENST00000304236 GPRASP1Q5JY77 1395 aa19.26■□□□□ 0.67
RAB40A-201ENST00000304236 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
RAB40A-201ENST00000304236 IDI1Q13907 227 aa19.25■□□□□ 0.67
RAB40A-201ENST00000304236 TMEM2Q9UHN6 1383 aa19.24■□□□□ 0.67
RAB40A-201ENST00000304236 E9PCH4 1651 aa19.24■□□□□ 0.67
RAB40A-201ENST00000304236 PIK3C2BO00750 1634 aa19.23■□□□□ 0.67
RAB40A-201ENST00000304236 RALBP1Q15311 655 aa19.23■□□□□ 0.67
RAB40A-201ENST00000304236 EFCAB6Q5THR3 1501 aa19.22■□□□□ 0.67
RAB40A-201ENST00000304236 SLC52A1Q9NWF4 448 aa19.22■□□□□ 0.67
RAB40A-201ENST00000304236 NOS1P29475 1434 aa19.22■□□□□ 0.67
RAB40A-201ENST00000304236 PPP4R2Q9NY27 417 aa19.21■□□□□ 0.67
RAB40A-201ENST00000304236 SMG6Q86US8 1419 aaKnown RBP19.2■□□□□ 0.66
RAB40A-201ENST00000304236 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
RAB40A-201ENST00000304236 HSPA1LP34931 641 aa19.19■□□□□ 0.66
RAB40A-201ENST00000304236 ILDR2Q71H61 639 aa19.19■□□□□ 0.66
RAB40A-201ENST00000304236 BRD4O60885 1362 aaPredicted RBP19.19■□□□□ 0.66
RAB40A-201ENST00000304236 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
RAB40A-201ENST00000304236 SYNMO15061 1565 aa19.18■□□□□ 0.66
RAB40A-201ENST00000304236 KDM5AP29375 1690 aaKnown RBP19.18■□□□□ 0.66
RAB40A-201ENST00000304236 RGL3Q3MIN7 710 aa19.18■□□□□ 0.66
RAB40A-201ENST00000304236 PNISRQ8TF01 805 aaKnown RBP19.18■□□□□ 0.66
RAB40A-201ENST00000304236 MYBBP1AQ9BQG0 1328 aaKnown RBP19.18■□□□□ 0.66
RAB40A-201ENST00000304236 STRCP1A6NGW2 1772 aa19.17■□□□□ 0.66
RAB40A-201ENST00000304236 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
RAB40A-201ENST00000304236 ADGRB3O60242 1522 aa19.14■□□□□ 0.66
RAB40A-201ENST00000304236 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
RAB40A-201ENST00000304236 NUDCQ9Y266 331 aa19.13■□□□□ 0.65
RAB40A-201ENST00000304236 LRPPRCP42704 1394 aaKnown RBP19.13■□□□□ 0.65
RAB40A-201ENST00000304236 TET3O43151 1660 aa19.13■□□□□ 0.65
RAB40A-201ENST00000304236 NBPF1Q3BBV0 1214 aa19.13■□□□□ 0.65
RAB40A-201ENST00000304236 RBM19Q9Y4C8 960 aaKnown RBP19.12■□□□□ 0.65
RAB40A-201ENST00000304236 ALKQ9UM73 1620 aa19.12■□□□□ 0.65
RAB40A-201ENST00000304236 HDGFP51858 240 aaKnown RBP19.12■□□□□ 0.65
RAB40A-201ENST00000304236 SLC26A8Q96RN1 970 aa19.11■□□□□ 0.65
RAB40A-201ENST00000304236 KCNA6P17658 529 aa19.1■□□□□ 0.65
RAB40A-201ENST00000304236 CNGB1Q14028 1251 aaPredicted RBP19.1■□□□□ 0.65
RAB40A-201ENST00000304236 SOCS7O14512 581 aa19.1■□□□□ 0.65
RAB40A-201ENST00000304236 PARD3Q8TEW0 1356 aa19.1■□□□□ 0.65
RAB40A-201ENST00000304236 TRPM2O94759 1503 aa19.09■□□□□ 0.65
RAB40A-201ENST00000304236 NLRP13Q86W25 1043 aa19.08■□□□□ 0.65
RAB40A-201ENST00000304236 TMF1P82094 1093 aa19.08■□□□□ 0.64
RAB40A-201ENST00000304236 TESK2Q96S53 571 aa19.08■□□□□ 0.64
RAB40A-201ENST00000304236 RNF123Q5XPI4 1314 aa19.07■□□□□ 0.64
RAB40A-201ENST00000304236 CHGAP10645 457 aaKnown RBP19.06■□□□□ 0.64
RAB40A-201ENST00000304236 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
RAB40A-201ENST00000304236 SPHKAPQ2M3C7 1700 aa19.06■□□□□ 0.64
RAB40A-201ENST00000304236 PER1O15534 1290 aaPredicted RBP19.06■□□□□ 0.64
RAB40A-201ENST00000304236 RIMS2Q9UQ26 1411 aa19.06■□□□□ 0.64
RAB40A-201ENST00000304236 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.05■□□□□ 0.64
RAB40A-201ENST00000304236 ZFYVE9O95405 1425 aa19.05■□□□□ 0.64
RAB40A-201ENST00000304236 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms