RNA–Protein interactions for RNA: ENST00000302101.5

NHLH1-201, Transcript of nescient helix-loop-helix 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLH1, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLH1-201ENST00000302101 PREX1Q8TCU6 1659 aa30.53■■■□□ 2.48
NHLH1-201ENST00000302101 CLTCQ00610 1675 aaKnown RBP30.52■■■□□ 2.48
NHLH1-201ENST00000302101 MYOM2P54296 1465 aa30.51■■■□□ 2.47
NHLH1-201ENST00000302101 BCANQ96GW7 911 aa30.5■■■□□ 2.47
NHLH1-201ENST00000302101 DNAJC5Q9H3Z4 198 aa30.5■■■□□ 2.47
NHLH1-201ENST00000302101 ADGRF5Q8IZF2 1346 aa30.49■■■□□ 2.47
NHLH1-201ENST00000302101 POLR3GLQ9BT43 218 aa30.49■■■□□ 2.47
NHLH1-201ENST00000302101 TSHZ2Q9NRE2 1034 aa30.48■■■□□ 2.47
NHLH1-201ENST00000302101 IDI1Q13907 227 aa30.48■■■□□ 2.47
NHLH1-201ENST00000302101 FBXO31Q5XUX0 539 aaPredicted RBP30.48■■■□□ 2.47
NHLH1-201ENST00000302101 FKBP8Q14318 412 aa30.47■■■□□ 2.47
NHLH1-201ENST00000302101 SLC52A1Q9NWF4 448 aa30.46■■■□□ 2.47
NHLH1-201ENST00000302101 ARID4BQ4LE39 1312 aaPredicted RBP30.46■■■□□ 2.47
NHLH1-201ENST00000302101 PPLO60437 1756 aa30.46■■■□□ 2.47
NHLH1-201ENST00000302101 KIAA1210Q9ULL0 1709 aa30.45■■■□□ 2.46
NHLH1-201ENST00000302101 RPGRIP1LQ68CZ1 1315 aa30.42■■■□□ 2.46
NHLH1-201ENST00000302101 CFAP70Q5T0N1 1121 aa30.41■■■□□ 2.46
NHLH1-201ENST00000302101 ERVK-7P63135 1459 aa30.41■■■□□ 2.46
NHLH1-201ENST00000302101 NRXN1Q9ULB1 1477 aa30.41■■■□□ 2.46
NHLH1-201ENST00000302101 IQGAP1P46940 1657 aa30.4■■■□□ 2.46
NHLH1-201ENST00000302101 ESF1Q9H501 851 aaKnown RBP30.4■■■□□ 2.46
NHLH1-201ENST00000302101 MYO5BQ9ULV0 1848 aa30.37■■■□□ 2.45
NHLH1-201ENST00000302101 TESK2Q96S53 571 aa30.36■■■□□ 2.45
NHLH1-201ENST00000302101 SCAF11Q99590 1463 aaKnown RBP30.35■■■□□ 2.45
NHLH1-201ENST00000302101 TMEM131LA2VDJ0 1609 aa30.34■■■□□ 2.45
NHLH1-201ENST00000302101 NEFLP07196 543 aa30.34■■■□□ 2.45
NHLH1-201ENST00000302101 NUTM2DQ5VT03 806 aaPredicted RBP30.33■■■□□ 2.45
NHLH1-201ENST00000302101 NEXMIFQ5QGS0 1516 aa30.33■■■□□ 2.45
NHLH1-201ENST00000302101 PIK3C2GO75747 1445 aa30.32■■■□□ 2.44
NHLH1-201ENST00000302101 ZMYM3Q14202 1370 aa30.31■■■□□ 2.44
NHLH1-201ENST00000302101 SPATA31D1Q6ZQQ2 1576 aa30.31■■■□□ 2.44
NHLH1-201ENST00000302101 VGFO15240 615 aaPredicted RBP30.3■■■□□ 2.44
NHLH1-201ENST00000302101 DISP3Q9P2K9 1392 aa30.28■■■□□ 2.44
NHLH1-201ENST00000302101 C14orf93Q9H972 538 aaKnown RBP30.27■■■□□ 2.44
NHLH1-201ENST00000302101 TMF1P82094 1093 aa30.26■■■□□ 2.44
NHLH1-201ENST00000302101 STAG3Q9UJ98 1225 aa30.26■■■□□ 2.44
NHLH1-201ENST00000302101 EIF3AQ14152 1382 aaKnown RBP30.25■■■□□ 2.43
NHLH1-201ENST00000302101 SETBP1Q9Y6X0 1596 aa30.24■■■□□ 2.43
NHLH1-201ENST00000302101 PRKRIP1Q9H875 184 aaPredicted RBP30.23■■■□□ 2.43
NHLH1-201ENST00000302101 ZFYVE9O95405 1425 aa30.2■■■□□ 2.42
NHLH1-201ENST00000302101 TMEM132EQ6IEE7 984 aa30.18■■■□□ 2.42
NHLH1-201ENST00000302101 ADGRB1O14514 1584 aa30.17■■■□□ 2.42
NHLH1-201ENST00000302101 SENP3Q9H4L4 574 aaPredicted RBP30.16■■■□□ 2.42
NHLH1-201ENST00000302101 A2ML1A8K2U0 1454 aa30.15■■■□□ 2.42
NHLH1-201ENST00000302101 CNGB1Q14028 1251 aaPredicted RBP30.14■■■□□ 2.42
NHLH1-201ENST00000302101 HNRNPUQ00839 825 aaKnown RBP eCLIP30.13■■■□□ 2.41
NHLH1-201ENST00000302101 TRAK1Q9UPV9 953 aa30.13■■■□□ 2.41
NHLH1-201ENST00000302101 TNRQ92752 1358 aa30.11■■■□□ 2.41
NHLH1-201ENST00000302101 MYO3AQ8NEV4 1616 aa30.09■■■□□ 2.41
NHLH1-201ENST00000302101 CDCA8Q53HL2 280 aa30.09■■■□□ 2.41
NHLH1-201ENST00000302101 CEBPAP49715 358 aaPredicted RBP30.07■■■□□ 2.4
NHLH1-201ENST00000302101 FER1L4A9Z1Z3 1794 aa30.07■■■□□ 2.4
NHLH1-201ENST00000302101 CENPJQ9HC77 1338 aaPredicted RBP30.06■■■□□ 2.4
NHLH1-201ENST00000302101 SLC24A1O60721 1099 aa30.06■■■□□ 2.4
NHLH1-201ENST00000302101 CCDC184Q52MB2 194 aa30.05■■■□□ 2.4
NHLH1-201ENST00000302101 RIMS2Q9UQ26 1411 aa30.05■■■□□ 2.4
NHLH1-201ENST00000302101 PANK3Q9H999 370 aa30.03■■■□□ 2.4
NHLH1-201ENST00000302101 C3P01024 1663 aa30.02■■■□□ 2.4
NHLH1-201ENST00000302101 SBNO2Q9Y2G9 1366 aa30.01■■■□□ 2.4
NHLH1-201ENST00000302101 KDM5AP29375 1690 aaKnown RBP30.01■■■□□ 2.4
NHLH1-201ENST00000302101 QRICH2Q9H0J4 1663 aa30.01■■■□□ 2.4
NHLH1-201ENST00000302101 PER1O15534 1290 aaPredicted RBP30.01■■■□□ 2.39
NHLH1-201ENST00000302101 PLPPR3Q6T4P5 718 aa30■■■□□ 2.39
NHLH1-201ENST00000302101 ASXL1Q8IXJ9 1541 aa30■■■□□ 2.39
NHLH1-201ENST00000302101 ARHGEF28Q8N1W1 1705 aaKnown RBP29.99■■■□□ 2.39
NHLH1-201ENST00000302101 ALKQ9UM73 1620 aa29.99■■■□□ 2.39
NHLH1-201ENST00000302101 MRS2Q9HD23 443 aa29.98■■■□□ 2.39
NHLH1-201ENST00000302101 STK26Q9P289 416 aa29.97■■■□□ 2.39
NHLH1-201ENST00000302101 UBR1Q8IWV7 1749 aa29.97■■■□□ 2.39
NHLH1-201ENST00000302101 MYOM1P52179 1685 aa29.95■■■□□ 2.38
NHLH1-201ENST00000302101 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.95■■■□□ 2.38
NHLH1-201ENST00000302101 NLRP1Q9C000 1473 aa29.92■■■□□ 2.38
NHLH1-201ENST00000302101 YTHDC2Q9H6S0 1430 aaKnown RBP29.91■■■□□ 2.38
NHLH1-201ENST00000302101 KTN1Q86UP2 1357 aaKnown RBP29.91■■■□□ 2.38
NHLH1-201ENST00000302101 HDGFP51858 240 aaKnown RBP29.91■■■□□ 2.38
NHLH1-201ENST00000302101 RALBP1Q15311 655 aa29.91■■■□□ 2.38
NHLH1-201ENST00000302101 ANP32EQ9BTT0 268 aa29.91■■■□□ 2.38
NHLH1-201ENST00000302101 RBM19Q9Y4C8 960 aaKnown RBP29.9■■■□□ 2.38
NHLH1-201ENST00000302101 IRX6P78412 446 aaPredicted RBP29.9■■■□□ 2.38
NHLH1-201ENST00000302101 TMEM2Q9UHN6 1383 aa29.89■■■□□ 2.37
NHLH1-201ENST00000302101 SAFB2Q14151 953 aaKnown RBP eCLIP29.88■■■□□ 2.37
NHLH1-201ENST00000302101 FAM9BQ8IZU0 186 aa29.87■■■□□ 2.37
NHLH1-201ENST00000302101 PTPRMP28827 1452 aa29.87■■■□□ 2.37
NHLH1-201ENST00000302101 SETD1AO15047 1707 aaKnown RBP29.86■■■□□ 2.37
NHLH1-201ENST00000302101 CC2D1BQ5T0F9 858 aaKnown RBP29.86■■■□□ 2.37
NHLH1-201ENST00000302101 NRXN3Q9Y4C0 1643 aa29.86■■■□□ 2.37
NHLH1-201ENST00000302101 PARD3Q8TEW0 1356 aa29.85■■■□□ 2.37
NHLH1-201ENST00000302101 KNSTRNQ9Y448 316 aa29.85■■■□□ 2.37
NHLH1-201ENST00000302101 MYBBP1AQ9BQG0 1328 aaKnown RBP29.85■■■□□ 2.37
NHLH1-201ENST00000302101 BCL11AQ9H165 835 aa29.84■■■□□ 2.37
NHLH1-201ENST00000302101 PRAM1Q96QH2 718 aa29.82■■■□□ 2.36
NHLH1-201ENST00000302101 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
NHLH1-201ENST00000302101 PRKCSHP14314 528 aaPredicted RBP29.81■■■□□ 2.36
NHLH1-201ENST00000302101 EVC2Q86UK5 1308 aa29.81■■■□□ 2.36
NHLH1-201ENST00000302101 POGKQ9P215 609 aa29.81■■■□□ 2.36
NHLH1-201ENST00000302101 TULP4Q9NRJ4 1543 aa29.79■■■□□ 2.36
NHLH1-201ENST00000302101 TMC1Q8TDI8 760 aa29.79■■■□□ 2.36
NHLH1-201ENST00000302101 LTKP29376 864 aa29.77■■■□□ 2.36
NHLH1-201ENST00000302101 LRPPRCP42704 1394 aaKnown RBP29.76■■■□□ 2.35
NHLH1-201ENST00000302101 METP08581 1390 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms