RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 VWDEQ8N2E2 1590 aa18.07■□□□□ 0.48
BCCIP-202ENST00000299130 ABCA9Q8IUA7 1624 aa18.07■□□□□ 0.48
BCCIP-202ENST00000299130 MYOM1P52179 1685 aa18.06■□□□□ 0.48
BCCIP-202ENST00000299130 PLEKHH1Q9ULM0 1364 aa18.06■□□□□ 0.48
BCCIP-202ENST00000299130 SYNMO15061 1565 aa18.05■□□□□ 0.48
BCCIP-202ENST00000299130 CFAP70Q5T0N1 1121 aa18.05■□□□□ 0.48
BCCIP-202ENST00000299130 CRBNQ96SW2 442 aa18.05■□□□□ 0.48
BCCIP-202ENST00000299130 KANK1Q14678 1352 aa18.04■□□□□ 0.48
BCCIP-202ENST00000299130 MROH1Q8NDA8 1641 aa18.04■□□□□ 0.48
BCCIP-202ENST00000299130 ADGRF5Q8IZF2 1346 aa18.04■□□□□ 0.48
BCCIP-202ENST00000299130 C20orf194Q5TEA3 1177 aa18.04■□□□□ 0.48
BCCIP-202ENST00000299130 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
BCCIP-202ENST00000299130 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
BCCIP-202ENST00000299130 ASXL1Q8IXJ9 1541 aa18.02■□□□□ 0.48
BCCIP-202ENST00000299130 WDR43Q15061 677 aaKnown RBP eCLIP18.02■□□□□ 0.48
BCCIP-202ENST00000299130 CDCA8Q53HL2 280 aa18.02■□□□□ 0.48
BCCIP-202ENST00000299130 IPO9Q96P70 1041 aaKnown RBP18.02■□□□□ 0.48
BCCIP-202ENST00000299130 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
BCCIP-202ENST00000299130 ANP32AP39687 249 aaKnown RBP18.01■□□□□ 0.47
BCCIP-202ENST00000299130 DUSP27Q5VZP5 1158 aa18■□□□□ 0.47
BCCIP-202ENST00000299130 ABCA6Q8N139 1617 aa17.99■□□□□ 0.47
BCCIP-202ENST00000299130 TCERG1O14776 1098 aaKnown RBP17.99■□□□□ 0.47
BCCIP-202ENST00000299130 ZNF521Q96K83 1311 aa17.99■□□□□ 0.47
BCCIP-202ENST00000299130 CCDC146Q8IYE0 955 aa17.99■□□□□ 0.47
BCCIP-202ENST00000299130 MAP3K4Q9Y6R4 1608 aa17.98■□□□□ 0.47
BCCIP-202ENST00000299130 EIF3AQ14152 1382 aaKnown RBP17.98■□□□□ 0.47
BCCIP-202ENST00000299130 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
BCCIP-202ENST00000299130 ERVK-7P63135 1459 aa17.98■□□□□ 0.47
BCCIP-202ENST00000299130 PDE4AP27815 886 aa17.98■□□□□ 0.47
BCCIP-202ENST00000299130 KDM5AP29375 1690 aaKnown RBP17.97■□□□□ 0.47
BCCIP-202ENST00000299130 NBR1Q14596 966 aa17.97■□□□□ 0.47
BCCIP-202ENST00000299130 CARD14Q9BXL6 1004 aa17.97■□□□□ 0.47
BCCIP-202ENST00000299130 MROH2AA6NES4 1674 aa17.97■□□□□ 0.47
BCCIP-202ENST00000299130 PIK3C2GO75747 1445 aa17.97■□□□□ 0.47
BCCIP-202ENST00000299130 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
BCCIP-202ENST00000299130 ASXL2Q76L83 1435 aa17.96■□□□□ 0.47
BCCIP-202ENST00000299130 MYOM2P54296 1465 aa17.95■□□□□ 0.46
BCCIP-202ENST00000299130 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
BCCIP-202ENST00000299130 PPRC1Q5VV67 1664 aaKnown RBP17.95■□□□□ 0.46
BCCIP-202ENST00000299130 EFCAB6Q5THR3 1501 aa17.95■□□□□ 0.46
BCCIP-202ENST00000299130 NEURL4Q96JN8 1562 aa17.94■□□□□ 0.46
BCCIP-202ENST00000299130 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
BCCIP-202ENST00000299130 NPC1L1Q9UHC9 1359 aa17.94■□□□□ 0.46
BCCIP-202ENST00000299130 GOLGA2Q08379 1002 aa17.94■□□□□ 0.46
BCCIP-202ENST00000299130 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
BCCIP-202ENST00000299130 KIF1BO60333 1816 aa17.94■□□□□ 0.46
BCCIP-202ENST00000299130 BCL11AQ9H165 835 aa17.93■□□□□ 0.46
BCCIP-202ENST00000299130 ZBTB47Q9UFB7 747 aaPredicted RBP17.93■□□□□ 0.46
BCCIP-202ENST00000299130 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
BCCIP-202ENST00000299130 SLFN5Q08AF3 891 aa17.92■□□□□ 0.46
BCCIP-202ENST00000299130 APAF1O14727 1248 aa17.91■□□□□ 0.46
BCCIP-202ENST00000299130 CHGAP10645 457 aaKnown RBP17.9■□□□□ 0.46
BCCIP-202ENST00000299130 MS4A1P11836 297 aa17.9■□□□□ 0.46
BCCIP-202ENST00000299130 NOS1P29475 1434 aa17.9■□□□□ 0.46
BCCIP-202ENST00000299130 NRXN1Q9ULB1 1477 aa17.89■□□□□ 0.45
BCCIP-202ENST00000299130 DMRT2Q9Y5R5 561 aa17.89■□□□□ 0.45
BCCIP-202ENST00000299130 KDM2BQ8NHM5 1336 aa17.88■□□□□ 0.45
BCCIP-202ENST00000299130 TRMT2AQ8IZ69 625 aaKnown RBP17.88■□□□□ 0.45
BCCIP-202ENST00000299130 CFAP65Q6ZU64 1925 aaKnown RBP17.87■□□□□ 0.45
BCCIP-202ENST00000299130 TRAK1Q9UPV9 953 aa17.87■□□□□ 0.45
BCCIP-202ENST00000299130 ADGRB3O60242 1522 aa17.86■□□□□ 0.45
BCCIP-202ENST00000299130 LMTK2Q8IWU2 1503 aa17.86■□□□□ 0.45
BCCIP-202ENST00000299130 DEKP35659 375 aaKnown RBP17.86■□□□□ 0.45
BCCIP-202ENST00000299130 MYO3AQ8NEV4 1616 aa17.85■□□□□ 0.45
BCCIP-202ENST00000299130 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
BCCIP-202ENST00000299130 GGT6Q6P531 493 aa17.85■□□□□ 0.45
BCCIP-202ENST00000299130 NPATQ14207 1427 aa17.85■□□□□ 0.45
BCCIP-202ENST00000299130 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
BCCIP-202ENST00000299130 CENPJQ9HC77 1338 aaPredicted RBP17.84■□□□□ 0.45
BCCIP-202ENST00000299130 BCAR3O75815 825 aa17.83■□□□□ 0.45
BCCIP-202ENST00000299130 FRMPD1Q5SYB0 1578 aa17.83■□□□□ 0.45
BCCIP-202ENST00000299130 SLC12A5Q9H2X9 1139 aa17.83■□□□□ 0.44
BCCIP-202ENST00000299130 TNNT2P45379 298 aaPredicted RBP17.82■□□□□ 0.44
BCCIP-202ENST00000299130 SBNO2Q9Y2G9 1366 aa17.81■□□□□ 0.44
BCCIP-202ENST00000299130 SLC24A1O60721 1099 aa17.81■□□□□ 0.44
BCCIP-202ENST00000299130 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
BCCIP-202ENST00000299130 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
BCCIP-202ENST00000299130 PPLO60437 1756 aa17.8■□□□□ 0.44
BCCIP-202ENST00000299130 NKTRP30414 1462 aaKnown RBP17.8■□□□□ 0.44
BCCIP-202ENST00000299130 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
BCCIP-202ENST00000299130 NUTM2DQ5VT03 806 aaPredicted RBP17.8■□□□□ 0.44
BCCIP-202ENST00000299130 CENPQQ7L2Z9 268 aaPredicted RBP17.8■□□□□ 0.44
BCCIP-202ENST00000299130 ADGRB1O14514 1584 aa17.79■□□□□ 0.44
BCCIP-202ENST00000299130 POGZQ7Z3K3 1410 aa17.79■□□□□ 0.44
BCCIP-202ENST00000299130 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
BCCIP-202ENST00000299130 CD109Q6YHK3 1445 aa17.79■□□□□ 0.44
BCCIP-202ENST00000299130 ZC3H13Q5T200 1668 aaKnown RBP17.78■□□□□ 0.44
BCCIP-202ENST00000299130 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
BCCIP-202ENST00000299130 E9PSI1 815 aa17.78■□□□□ 0.44
BCCIP-202ENST00000299130 POLR3AO14802 1390 aaPredicted RBP17.78■□□□□ 0.44
BCCIP-202ENST00000299130 MORC1Q86VD1 984 aa17.77■□□□□ 0.44
BCCIP-202ENST00000299130 LAS1LQ9Y4W2 734 aaKnown RBP17.77■□□□□ 0.43
BCCIP-202ENST00000299130 NPM1P06748 294 aaKnown RBP eCLIP17.76■□□□□ 0.43
BCCIP-202ENST00000299130 SHPRHQ149N8 1683 aa17.76■□□□□ 0.43
BCCIP-202ENST00000299130 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
BCCIP-202ENST00000299130 MLH3Q9UHC1 1453 aa17.75■□□□□ 0.43
BCCIP-202ENST00000299130 RRP7AQ9Y3A4 280 aaKnown RBP17.75■□□□□ 0.43
BCCIP-202ENST00000299130 NEUROD2Q15784 382 aa17.75■□□□□ 0.43
BCCIP-202ENST00000299130 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
BCCIP-202ENST00000299130 RAPGEF3O95398 923 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms