RNA–Protein interactions for RNA: ENST00000296343.9

RUBCN-202, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUBCN, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-202ENST00000296343 POGZQ7Z3K3 1410 aa17.68■□□□□ 0.42
RUBCN-202ENST00000296343 KIDINS220Q9ULH0 1771 aa17.67■□□□□ 0.42
RUBCN-202ENST00000296343 MAP3K4Q9Y6R4 1608 aa17.66■□□□□ 0.42
RUBCN-202ENST00000296343 COL17A1Q9UMD9 1497 aaPredicted RBP17.66■□□□□ 0.42
RUBCN-202ENST00000296343 MYT1Q01538 1121 aa17.66■□□□□ 0.42
RUBCN-202ENST00000296343 TSPOAP1O95153 1857 aa17.66■□□□□ 0.42
RUBCN-202ENST00000296343 INO80Q9ULG1 1556 aaPredicted RBP17.65■□□□□ 0.42
RUBCN-202ENST00000296343 NEUROD2Q15784 382 aa17.65■□□□□ 0.42
RUBCN-202ENST00000296343 PTPRTO14522 1441 aa17.65■□□□□ 0.42
RUBCN-202ENST00000296343 WDR43Q15061 677 aaKnown RBP eCLIP17.65■□□□□ 0.42
RUBCN-202ENST00000296343 PPP2R1AP30153 589 aa17.64■□□□□ 0.41
RUBCN-202ENST00000296343 TRPM2O94759 1503 aa17.64■□□□□ 0.41
RUBCN-202ENST00000296343 CABP2Q9NPB3 220 aa17.64■□□□□ 0.41
RUBCN-202ENST00000296343 BRD4O60885 1362 aaPredicted RBP17.64■□□□□ 0.41
RUBCN-202ENST00000296343 CARD14Q9BXL6 1004 aa17.63■□□□□ 0.41
RUBCN-202ENST00000296343 PPRC1Q5VV67 1664 aaKnown RBP17.63■□□□□ 0.41
RUBCN-202ENST00000296343 PARD3Q8TEW0 1356 aa17.63■□□□□ 0.41
RUBCN-202ENST00000296343 POLR1AO95602 1720 aaPredicted RBP17.62■□□□□ 0.41
RUBCN-202ENST00000296343 AMER1Q5JTC6 1135 aaPredicted RBP17.62■□□□□ 0.41
RUBCN-202ENST00000296343 SCAF11Q99590 1463 aaKnown RBP17.62■□□□□ 0.41
RUBCN-202ENST00000296343 RBM19Q9Y4C8 960 aaKnown RBP17.61■□□□□ 0.41
RUBCN-202ENST00000296343 ARAP3Q8WWN8 1544 aa17.61■□□□□ 0.41
RUBCN-202ENST00000296343 SPHKAPQ2M3C7 1700 aa17.61■□□□□ 0.41
RUBCN-202ENST00000296343 PPP4R2Q9NY27 417 aa17.61■□□□□ 0.41
RUBCN-202ENST00000296343 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
RUBCN-202ENST00000296343 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
RUBCN-202ENST00000296343 CCDC136Q96JN2 1154 aa17.6■□□□□ 0.41
RUBCN-202ENST00000296343 CEP152O94986 1710 aa17.6■□□□□ 0.41
RUBCN-202ENST00000296343 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
RUBCN-202ENST00000296343 MROH1Q8NDA8 1641 aa17.59■□□□□ 0.41
RUBCN-202ENST00000296343 SRPK2P78362 688 aaKnown RBP17.58■□□□□ 0.4
RUBCN-202ENST00000296343 MADDQ8WXG6 1647 aa17.58■□□□□ 0.4
RUBCN-202ENST00000296343 TET3O43151 1660 aa17.58■□□□□ 0.4
RUBCN-202ENST00000296343 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
RUBCN-202ENST00000296343 RRP7AQ9Y3A4 280 aaKnown RBP17.57■□□□□ 0.4
RUBCN-202ENST00000296343 RCAN3Q9UKA8 241 aa17.56■□□□□ 0.4
RUBCN-202ENST00000296343 FRMPD1Q5SYB0 1578 aa17.56■□□□□ 0.4
RUBCN-202ENST00000296343 SKAP1Q86WV1 359 aa17.55■□□□□ 0.4
RUBCN-202ENST00000296343 EXOC6Q8TAG9 804 aa17.55■□□□□ 0.4
RUBCN-202ENST00000296343 EFCAB6Q5THR3 1501 aa17.55■□□□□ 0.4
RUBCN-202ENST00000296343 APAF1O14727 1248 aa17.54■□□□□ 0.4
RUBCN-202ENST00000296343 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
RUBCN-202ENST00000296343 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
RUBCN-202ENST00000296343 EIF2AK4Q9P2K8 1649 aaKnown RBP17.54■□□□□ 0.4
RUBCN-202ENST00000296343 POGKQ9P215 609 aa17.54■□□□□ 0.4
RUBCN-202ENST00000296343 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
RUBCN-202ENST00000296343 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
RUBCN-202ENST00000296343 ABCA6Q8N139 1617 aa17.53■□□□□ 0.4
RUBCN-202ENST00000296343 ESF1Q9H501 851 aaKnown RBP17.53■□□□□ 0.4
RUBCN-202ENST00000296343 DEPDC5O75140 1603 aa17.52■□□□□ 0.4
RUBCN-202ENST00000296343 RNF17Q9BXT8 1623 aaKnown RBP17.52■□□□□ 0.4
RUBCN-202ENST00000296343 MLH3Q9UHC1 1453 aa17.52■□□□□ 0.4
RUBCN-202ENST00000296343 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.4
RUBCN-202ENST00000296343 FBLN1P23142 703 aa17.52■□□□□ 0.4
RUBCN-202ENST00000296343 PRAM1Q96QH2 718 aa17.51■□□□□ 0.39
RUBCN-202ENST00000296343 HECW2Q9P2P5 1572 aa17.51■□□□□ 0.39
RUBCN-202ENST00000296343 NUTM2FA1L443 756 aa17.51■□□□□ 0.39
RUBCN-202ENST00000296343 WAPLQ7Z5K2 1190 aa17.51■□□□□ 0.39
RUBCN-202ENST00000296343 MROH2AA6NES4 1674 aa17.5■□□□□ 0.39
RUBCN-202ENST00000296343 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
RUBCN-202ENST00000296343 VWDEQ8N2E2 1590 aa17.5■□□□□ 0.39
RUBCN-202ENST00000296343 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
RUBCN-202ENST00000296343 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
RUBCN-202ENST00000296343 ERVK-7P63135 1459 aa17.48■□□□□ 0.39
RUBCN-202ENST00000296343 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
RUBCN-202ENST00000296343 STAC3Q96MF2 364 aa17.48■□□□□ 0.39
RUBCN-202ENST00000296343 SPINK5Q9NQ38 1064 aaPredicted RBP17.48■□□□□ 0.39
RUBCN-202ENST00000296343 ABCC3O15438 1527 aa17.47■□□□□ 0.39
RUBCN-202ENST00000296343 NEO1Q92859 1461 aa17.47■□□□□ 0.39
RUBCN-202ENST00000296343 CEBPAP49715 358 aaPredicted RBP17.47■□□□□ 0.39
RUBCN-202ENST00000296343 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
RUBCN-202ENST00000296343 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
RUBCN-202ENST00000296343 NSD3Q9BZ95 1437 aa17.46■□□□□ 0.39
RUBCN-202ENST00000296343 KIF1BO60333 1816 aa17.46■□□□□ 0.39
RUBCN-202ENST00000296343 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
RUBCN-202ENST00000296343 MTHFSP49914 203 aa17.45■□□□□ 0.38
RUBCN-202ENST00000296343 DIP2CQ9Y2E4 1556 aa17.42■□□□□ 0.38
RUBCN-202ENST00000296343 NCKAP5LQ9HCH0 1330 aa17.42■□□□□ 0.38
RUBCN-202ENST00000296343 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
RUBCN-202ENST00000296343 PIK3C2GO75747 1445 aa17.42■□□□□ 0.38
RUBCN-202ENST00000296343 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
RUBCN-202ENST00000296343 EVC2Q86UK5 1308 aa17.41■□□□□ 0.38
RUBCN-202ENST00000296343 CFAP74Q9C0B2 1584 aa17.41■□□□□ 0.38
RUBCN-202ENST00000296343 TXNDC2Q86VQ3 553 aa17.41■□□□□ 0.38
RUBCN-202ENST00000296343 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
RUBCN-202ENST00000296343 IQGAP1P46940 1657 aa17.4■□□□□ 0.38
RUBCN-202ENST00000296343 SIGLEC1Q9BZZ2 1709 aa17.4■□□□□ 0.38
RUBCN-202ENST00000296343 BCL2L13Q9BXK5 485 aa17.4■□□□□ 0.38
RUBCN-202ENST00000296343 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
RUBCN-202ENST00000296343 ASXL1Q8IXJ9 1541 aa17.39■□□□□ 0.38
RUBCN-202ENST00000296343 GOLGA2Q08379 1002 aa17.39■□□□□ 0.37
RUBCN-202ENST00000296343 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.37
RUBCN-202ENST00000296343 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.37
RUBCN-202ENST00000296343 ADGRB3O60242 1522 aa17.38■□□□□ 0.37
RUBCN-202ENST00000296343 SOX12O15370 315 aa17.38■□□□□ 0.37
RUBCN-202ENST00000296343 MYOM2P54296 1465 aa17.38■□□□□ 0.37
RUBCN-202ENST00000296343 BCAR3O75815 825 aa17.37■□□□□ 0.37
RUBCN-202ENST00000296343 NPM2Q86SE8 214 aaKnown RBP17.37■□□□□ 0.37
RUBCN-202ENST00000296343 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
RUBCN-202ENST00000296343 CDK19Q9BWU1 502 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms