RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
CLRN1-201ENST00000295911 ZNF518AQ6AHZ1 1483 aa12.79□□□□□ -0.36
CLRN1-201ENST00000295911 VWDEQ8N2E2 1590 aa12.79□□□□□ -0.36
CLRN1-201ENST00000295911 STAC3Q96MF2 364 aa12.79□□□□□ -0.36
CLRN1-201ENST00000295911 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
CLRN1-201ENST00000295911 DHX29Q7Z478 1369 aaKnown RBP12.79□□□□□ -0.36
CLRN1-201ENST00000295911 PRAG1Q86YV5 1406 aa12.78□□□□□ -0.36
CLRN1-201ENST00000295911 TRPM2O94759 1503 aa12.78□□□□□ -0.36
CLRN1-201ENST00000295911 CD109Q6YHK3 1445 aa12.78□□□□□ -0.36
CLRN1-201ENST00000295911 A2MP01023 1474 aa12.77□□□□□ -0.37
CLRN1-201ENST00000295911 PRDM15P57071 1507 aaPredicted RBP12.76□□□□□ -0.37
CLRN1-201ENST00000295911 MYT1LQ9UL68 1186 aa12.76□□□□□ -0.37
CLRN1-201ENST00000295911 NEURL4Q96JN8 1562 aa12.76□□□□□ -0.37
CLRN1-201ENST00000295911 PTPRTO14522 1441 aa12.75□□□□□ -0.37
CLRN1-201ENST00000295911 GPRASP1Q5JY77 1395 aa12.74□□□□□ -0.37
CLRN1-201ENST00000295911 RNF17Q9BXT8 1623 aaKnown RBP12.74□□□□□ -0.37
CLRN1-201ENST00000295911 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
CLRN1-201ENST00000295911 KIF1BO60333 1816 aa12.74□□□□□ -0.37
CLRN1-201ENST00000295911 NEO1Q92859 1461 aa12.74□□□□□ -0.37
CLRN1-201ENST00000295911 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
CLRN1-201ENST00000295911 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
CLRN1-201ENST00000295911 MLH3Q9UHC1 1453 aa12.73□□□□□ -0.37
CLRN1-201ENST00000295911 MROH1Q8NDA8 1641 aa12.73□□□□□ -0.37
CLRN1-201ENST00000295911 KIF3BO15066 747 aa12.72□□□□□ -0.37
CLRN1-201ENST00000295911 POTEIP0CG38 1075 aa12.72□□□□□ -0.37
CLRN1-201ENST00000295911 CLCN6P51797 869 aa12.72□□□□□ -0.37
CLRN1-201ENST00000295911 POGZQ7Z3K3 1410 aa12.72□□□□□ -0.37
CLRN1-201ENST00000295911 PAK3O75914 559 aaPredicted RBP12.71□□□□□ -0.37
CLRN1-201ENST00000295911 CLTCL1P53675 1640 aa12.71□□□□□ -0.37
CLRN1-201ENST00000295911 KIAA1210Q9ULL0 1709 aa12.71□□□□□ -0.37
CLRN1-201ENST00000295911 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.37
CLRN1-201ENST00000295911 ST20-MTHFSA0A0A6YYL1 179 aa12.71□□□□□ -0.38
CLRN1-201ENST00000295911 PHF12Q96QT6 1004 aa12.71□□□□□ -0.38
CLRN1-201ENST00000295911 MAP3K4Q9Y6R4 1608 aa12.7□□□□□ -0.38
CLRN1-201ENST00000295911 EFCAB6Q5THR3 1501 aa12.69□□□□□ -0.38
CLRN1-201ENST00000295911 MADDQ8WXG6 1647 aa12.69□□□□□ -0.38
CLRN1-201ENST00000295911 GLI2P10070 1586 aa12.69□□□□□ -0.38
CLRN1-201ENST00000295911 KTN1Q86UP2 1357 aaKnown RBP12.69□□□□□ -0.38
CLRN1-201ENST00000295911 GALR2O43603 387 aaPredicted RBP12.67□□□□□ -0.38
CLRN1-201ENST00000295911 IQGAP1P46940 1657 aa12.67□□□□□ -0.38
CLRN1-201ENST00000295911 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
CLRN1-201ENST00000295911 RICTORQ6R327 1708 aa12.66□□□□□ -0.38
CLRN1-201ENST00000295911 POLR3GLQ9BT43 218 aa12.66□□□□□ -0.38
CLRN1-201ENST00000295911 IFT172Q9UG01 1749 aa12.66□□□□□ -0.38
CLRN1-201ENST00000295911 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
CLRN1-201ENST00000295911 NBPF1Q3BBV0 1214 aa12.65□□□□□ -0.38
CLRN1-201ENST00000295911 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
CLRN1-201ENST00000295911 RIMBP3CA6NJZ7 1639 aa12.65□□□□□ -0.38
CLRN1-201ENST00000295911 RIMBP3BA6NNM3 1639 aa12.65□□□□□ -0.38
CLRN1-201ENST00000295911 RIMBP3Q9UFD9 1639 aa12.65□□□□□ -0.38
CLRN1-201ENST00000295911 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
CLRN1-201ENST00000295911 PLCD3Q8N3E9 789 aa12.64□□□□□ -0.39
CLRN1-201ENST00000295911 TSPYL2Q9H2G4 693 aaPredicted RBP12.64□□□□□ -0.39
CLRN1-201ENST00000295911 FRMPD1Q5SYB0 1578 aa12.64□□□□□ -0.39
CLRN1-201ENST00000295911 CFAP65Q6ZU64 1925 aaKnown RBP12.63□□□□□ -0.39
CLRN1-201ENST00000295911 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
CLRN1-201ENST00000295911 COL17A1Q9UMD9 1497 aaPredicted RBP12.63□□□□□ -0.39
CLRN1-201ENST00000295911 SUPT16HQ9Y5B9 1047 aaKnown RBP12.62□□□□□ -0.39
CLRN1-201ENST00000295911 MYOM2P54296 1465 aa12.62□□□□□ -0.39
CLRN1-201ENST00000295911 ZC3H13Q5T200 1668 aaKnown RBP12.62□□□□□ -0.39
CLRN1-201ENST00000295911 SLC24A1O60721 1099 aa12.62□□□□□ -0.39
CLRN1-201ENST00000295911 TMF1P82094 1093 aa12.62□□□□□ -0.39
CLRN1-201ENST00000295911 RALBP1Q15311 655 aa12.62□□□□□ -0.39
CLRN1-201ENST00000295911 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
CLRN1-201ENST00000295911 DIP2CQ9Y2E4 1556 aa12.61□□□□□ -0.39
CLRN1-201ENST00000295911 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
CLRN1-201ENST00000295911 WASHC2CQ9Y4E1 1318 aa12.6□□□□□ -0.39
CLRN1-201ENST00000295911 CAMSAP1Q5T5Y3 1602 aa12.6□□□□□ -0.39
CLRN1-201ENST00000295911 NEFLP07196 543 aa12.6□□□□□ -0.39
CLRN1-201ENST00000295911 CYB5RLQ6IPT4 315 aa12.6□□□□□ -0.39
CLRN1-201ENST00000295911 TESK2Q96S53 571 aa12.6□□□□□ -0.39
CLRN1-201ENST00000295911 MROH2AA6NES4 1674 aa12.59□□□□□ -0.39
CLRN1-201ENST00000295911 SCAF11Q99590 1463 aaKnown RBP12.59□□□□□ -0.39
CLRN1-201ENST00000295911 CCDC184Q52MB2 194 aa12.59□□□□□ -0.39
CLRN1-201ENST00000295911 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
CLRN1-201ENST00000295911 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
CLRN1-201ENST00000295911 PPLO60437 1756 aa12.58□□□□□ -0.39
CLRN1-201ENST00000295911 ABCC3O15438 1527 aa12.58□□□□□ -0.4
CLRN1-201ENST00000295911 FAM9BQ8IZU0 186 aa12.58□□□□□ -0.4
CLRN1-201ENST00000295911 ADGRB3O60242 1522 aa12.57□□□□□ -0.4
CLRN1-201ENST00000295911 RASEFQ8IZ41 740 aa12.57□□□□□ -0.4
CLRN1-201ENST00000295911 CCDC61Q9Y6R9 512 aa12.57□□□□□ -0.4
CLRN1-201ENST00000295911 ZMYM4Q5VZL5 1548 aa12.57□□□□□ -0.4
CLRN1-201ENST00000295911 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
CLRN1-201ENST00000295911 RAPGEF3O95398 923 aa12.56□□□□□ -0.4
CLRN1-201ENST00000295911 GGT6Q6P531 493 aa12.56□□□□□ -0.4
CLRN1-201ENST00000295911 ZBED9Q6R2W3 1325 aa12.56□□□□□ -0.4
CLRN1-201ENST00000295911 MYBBP1AQ9BQG0 1328 aaKnown RBP12.56□□□□□ -0.4
CLRN1-201ENST00000295911 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
CLRN1-201ENST00000295911 NPATQ14207 1427 aa12.56□□□□□ -0.4
CLRN1-201ENST00000295911 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
CLRN1-201ENST00000295911 TMC1Q8TDI8 760 aa12.55□□□□□ -0.4
CLRN1-201ENST00000295911 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
CLRN1-201ENST00000295911 NRXN1Q9ULB1 1477 aa12.55□□□□□ -0.4
CLRN1-201ENST00000295911 TSPOAP1O95153 1857 aa12.55□□□□□ -0.4
CLRN1-201ENST00000295911 SETBP1Q9Y6X0 1596 aa12.55□□□□□ -0.4
CLRN1-201ENST00000295911 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
CLRN1-201ENST00000295911 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
CLRN1-201ENST00000295911 KDM5AP29375 1690 aaKnown RBP12.54□□□□□ -0.4
CLRN1-201ENST00000295911 PIK3C2BO00750 1634 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms