RNA–Protein interactions for RNA: ENST00000295269.4

SLC9A4-201, Transcript of solute carrier family 9 member A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A4, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A4-201ENST00000295269 TRIM44Q96DX7 344 aaPredicted RBP9.67□□□□□ -0.86
SLC9A4-201ENST00000295269 ANP32BQ92688 251 aaKnown RBP9.67□□□□□ -0.86
SLC9A4-201ENST00000295269 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
SLC9A4-201ENST00000295269 MLH3Q9UHC1 1453 aa9.67□□□□□ -0.86
SLC9A4-201ENST00000295269 NAIPQ13075 1403 aa9.67□□□□□ -0.86
SLC9A4-201ENST00000295269 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
SLC9A4-201ENST00000295269 DNMT1P26358 1616 aaKnown RBP9.66□□□□□ -0.86
SLC9A4-201ENST00000295269 PDE4AP27815 886 aa9.66□□□□□ -0.86
SLC9A4-201ENST00000295269 DDRGK1Q96HY6 314 aa9.66□□□□□ -0.86
SLC9A4-201ENST00000295269 EID1Q9Y6B2 187 aa9.66□□□□□ -0.86
SLC9A4-201ENST00000295269 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
SLC9A4-201ENST00000295269 BCL2L13Q9BXK5 485 aa9.65□□□□□ -0.86
SLC9A4-201ENST00000295269 PRKRIP1Q9H875 184 aaPredicted RBP9.65□□□□□ -0.86
SLC9A4-201ENST00000295269 ADGRL2O95490 1459 aa9.65□□□□□ -0.86
SLC9A4-201ENST00000295269 CCDC144AA2RUR9 1427 aa9.65□□□□□ -0.87
SLC9A4-201ENST00000295269 SAMD9LQ8IVG5 1584 aa9.65□□□□□ -0.87
SLC9A4-201ENST00000295269 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
SLC9A4-201ENST00000295269 TAOK2Q9UL54 1235 aa9.64□□□□□ -0.87
SLC9A4-201ENST00000295269 APBB1O00213 710 aa9.64□□□□□ -0.87
SLC9A4-201ENST00000295269 SLC52A1Q9NWF4 448 aa9.64□□□□□ -0.87
SLC9A4-201ENST00000295269 CNTLNQ9NXG0 1405 aa9.64□□□□□ -0.87
SLC9A4-201ENST00000295269 SAFB2Q14151 953 aaKnown RBP eCLIP9.63□□□□□ -0.87
SLC9A4-201ENST00000295269 STAC3Q96MF2 364 aa9.63□□□□□ -0.87
SLC9A4-201ENST00000295269 NUDCQ9Y266 331 aa9.63□□□□□ -0.87
SLC9A4-201ENST00000295269 CDC42BPAQ5VT25 1732 aa9.63□□□□□ -0.87
SLC9A4-201ENST00000295269 PPP4R3CPQ6ZMV5 832 aa9.63□□□□□ -0.87
SLC9A4-201ENST00000295269 CDCA7LQ96GN5 454 aa9.62□□□□□ -0.87
SLC9A4-201ENST00000295269 KNSTRNQ9Y448 316 aa9.62□□□□□ -0.87
SLC9A4-201ENST00000295269 BECN1Q14457 450 aa9.62□□□□□ -0.87
SLC9A4-201ENST00000295269 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
SLC9A4-201ENST00000295269 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.62□□□□□ -0.87
SLC9A4-201ENST00000295269 HECW2Q9P2P5 1572 aa9.61□□□□□ -0.87
SLC9A4-201ENST00000295269 CRBNQ96SW2 442 aa9.61□□□□□ -0.87
SLC9A4-201ENST00000295269 RRP7AQ9Y3A4 280 aaKnown RBP9.61□□□□□ -0.87
SLC9A4-201ENST00000295269 KDM5CP41229 1560 aa9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 VGFO15240 615 aaPredicted RBP9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 THEMISQ8N1K5 641 aaPredicted RBP9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 WASHC2AQ641Q2 1341 aa9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 ST20-MTHFSA0A0A6YYL1 179 aa9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 DNTTIP2Q5QJE6 756 aaKnown RBP9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 MAP3K4Q9Y6R4 1608 aa9.59□□□□□ -0.87
SLC9A4-201ENST00000295269 FTSJ3Q8IY81 847 aaKnown RBP9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 YEATS2Q9ULM3 1422 aa9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 MAST1Q9Y2H9 1570 aa9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 ZBED9Q6R2W3 1325 aa9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 U2SURPO15042 1029 aaKnown RBP9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 FOXD4L5Q5VV16 416 aaPredicted RBP9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 FOXD4L4Q8WXT5 416 aaPredicted RBP9.58□□□□□ -0.88
SLC9A4-201ENST00000295269 CDC42BPBQ9Y5S2 1711 aa9.57□□□□□ -0.88
SLC9A4-201ENST00000295269 GSE1Q14687 1217 aa9.57□□□□□ -0.88
SLC9A4-201ENST00000295269 ARHGEF12Q9NZN5 1544 aa9.57□□□□□ -0.88
SLC9A4-201ENST00000295269 MFAP1P55081 439 aaKnown RBP9.57□□□□□ -0.88
SLC9A4-201ENST00000295269 ADGBQ8N7X0 1667 aa9.56□□□□□ -0.88
SLC9A4-201ENST00000295269 FRAT2O75474 233 aaPredicted RBP9.56□□□□□ -0.88
SLC9A4-201ENST00000295269 SOX12O15370 315 aa9.56□□□□□ -0.88
SLC9A4-201ENST00000295269 FOXD4L6Q3SYB3 417 aaPredicted RBP9.56□□□□□ -0.88
SLC9A4-201ENST00000295269 FOXD4L3Q6VB84 417 aaPredicted RBP9.56□□□□□ -0.88
SLC9A4-201ENST00000295269 TCERG1O14776 1098 aaKnown RBP9.55□□□□□ -0.88
SLC9A4-201ENST00000295269 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
SLC9A4-201ENST00000295269 PNNQ9H307 717 aaKnown RBP9.55□□□□□ -0.88
SLC9A4-201ENST00000295269 RPGRIP1LQ68CZ1 1315 aa9.55□□□□□ -0.88
SLC9A4-201ENST00000295269 NFKBIBQ15653 356 aa9.55□□□□□ -0.88
SLC9A4-201ENST00000295269 UBE2Q2Q8WVN8 375 aa9.55□□□□□ -0.88
SLC9A4-201ENST00000295269 TNRQ92752 1358 aa9.54□□□□□ -0.88
SLC9A4-201ENST00000295269 PLXNC1O60486 1568 aa9.54□□□□□ -0.88
SLC9A4-201ENST00000295269 C14orf37Q86TY3 774 aa9.54□□□□□ -0.88
SLC9A4-201ENST00000295269 BCL11BQ9C0K0 894 aaPredicted RBP9.54□□□□□ -0.88
SLC9A4-201ENST00000295269 RNF123Q5XPI4 1314 aa9.54□□□□□ -0.88
SLC9A4-201ENST00000295269 HSP90AB1P08238 724 aaKnown RBP9.54□□□□□ -0.88
SLC9A4-201ENST00000295269 VIRMAQ69YN4 1812 aaKnown RBP9.53□□□□□ -0.88
SLC9A4-201ENST00000295269 RRP1P56182 461 aaKnown RBP9.53□□□□□ -0.88
SLC9A4-201ENST00000295269 NUTM2DQ5VT03 806 aaPredicted RBP9.53□□□□□ -0.88
SLC9A4-201ENST00000295269 NOL8Q76FK4 1167 aaKnown RBP9.53□□□□□ -0.88
SLC9A4-201ENST00000295269 COG6Q9Y2V7 657 aa9.53□□□□□ -0.88
SLC9A4-201ENST00000295269 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
SLC9A4-201ENST00000295269 POGKQ9P215 609 aa9.52□□□□□ -0.88
SLC9A4-201ENST00000295269 ZMYM3Q14202 1370 aa9.52□□□□□ -0.89
SLC9A4-201ENST00000295269 ZMYM4Q5VZL5 1548 aa9.52□□□□□ -0.89
SLC9A4-201ENST00000295269 ANKLE2Q86XL3 938 aa9.52□□□□□ -0.89
SLC9A4-201ENST00000295269 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
SLC9A4-201ENST00000295269 ANKRD30BQ9BXX2 1392 aa9.51□□□□□ -0.89
SLC9A4-201ENST00000295269 ELL2O00472 640 aaPredicted RBP9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 TXNDC2Q86VQ3 553 aa9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 ARHGEF40Q8TER5 1519 aa9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 FAM135AQ9P2D6 1515 aa9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 KIF7Q2M1P5 1343 aa9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 AGLP35573 1532 aa9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 KCNA4P22459 653 aa9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 CEBPAP49715 358 aaPredicted RBP9.5□□□□□ -0.89
SLC9A4-201ENST00000295269 EIF3AQ14152 1382 aaKnown RBP9.49□□□□□ -0.89
SLC9A4-201ENST00000295269 FBXO31Q5XUX0 539 aaPredicted RBP9.49□□□□□ -0.89
SLC9A4-201ENST00000295269 INO80Q9ULG1 1556 aaPredicted RBP9.49□□□□□ -0.89
SLC9A4-201ENST00000295269 PZPP20742 1482 aa9.49□□□□□ -0.89
SLC9A4-201ENST00000295269 MPNDQ8N594 471 aa9.49□□□□□ -0.89
SLC9A4-201ENST00000295269 RPRD2Q5VT52 1461 aaKnown RBP9.48□□□□□ -0.89
SLC9A4-201ENST00000295269 KDM5DQ9BY66 1539 aa9.48□□□□□ -0.89
SLC9A4-201ENST00000295269 PANK3Q9H999 370 aa9.48□□□□□ -0.89
SLC9A4-201ENST00000295269 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
SLC9A4-201ENST00000295269 NBPF8Q3BBV2 869 aa9.48□□□□□ -0.89
SLC9A4-201ENST00000295269 DIP2CQ9Y2E4 1556 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms