RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 RRBP1Q9P2E9 1410 aaKnown RBP20.36■□□□□ 0.85
PSMB4-201ENST00000290541 ARHGEF5Q12774 1597 aa20.36■□□□□ 0.85
PSMB4-201ENST00000290541 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
PSMB4-201ENST00000290541 ABCC5O15440 1437 aa20.35■□□□□ 0.85
PSMB4-201ENST00000290541 CFAP65Q6ZU64 1925 aaKnown RBP20.34■□□□□ 0.85
PSMB4-201ENST00000290541 DAPK1P53355 1430 aa20.31■□□□□ 0.84
PSMB4-201ENST00000290541 RSPH4AQ5TD94 716 aa20.31■□□□□ 0.84
PSMB4-201ENST00000290541 QTRT2Q9H974 415 aaKnown RBP20.31■□□□□ 0.84
PSMB4-201ENST00000290541 IFFO2Q5TF58 517 aa20.3■□□□□ 0.84
PSMB4-201ENST00000290541 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
PSMB4-201ENST00000290541 CEP152O94986 1710 aa20.29■□□□□ 0.84
PSMB4-201ENST00000290541 MAST1Q9Y2H9 1570 aa20.29■□□□□ 0.84
PSMB4-201ENST00000290541 NHSL1Q5SYE7 1610 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 TSPY4P0CV99 314 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 TSPY10P0CW01 314 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 ITGAEP38570 1179 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 CHIC2Q9UKJ5 165 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 EID1Q9Y6B2 187 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 TMEM2Q9UHN6 1383 aa20.28■□□□□ 0.84
PSMB4-201ENST00000290541 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.83
PSMB4-201ENST00000290541 CROCC2H7BZ55 1655 aa20.26■□□□□ 0.83
PSMB4-201ENST00000290541 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
PSMB4-201ENST00000290541 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.24■□□□□ 0.83
PSMB4-201ENST00000290541 CCDC125Q86Z20 511 aa20.23■□□□□ 0.83
PSMB4-201ENST00000290541 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
PSMB4-201ENST00000290541 NGLY1Q96IV0 654 aa20.22■□□□□ 0.83
PSMB4-201ENST00000290541 C8orf37Q96NL8 207 aa20.21■□□□□ 0.83
PSMB4-201ENST00000290541 SETD5Q9C0A6 1442 aa20.2■□□□□ 0.82
PSMB4-201ENST00000290541 RRP7BPQ9NSQ0 103 aa20.19■□□□□ 0.82
PSMB4-201ENST00000290541 EFCAB6Q5THR3 1501 aa20.18■□□□□ 0.82
PSMB4-201ENST00000290541 EIF2AK4Q9P2K8 1649 aaKnown RBP20.18■□□□□ 0.82
PSMB4-201ENST00000290541 NCOA3Q9Y6Q9 1424 aa20.18■□□□□ 0.82
PSMB4-201ENST00000290541 ADGRL2O95490 1459 aa20.16■□□□□ 0.82
PSMB4-201ENST00000290541 BCL9LQ86UU0 1499 aa20.14■□□□□ 0.81
PSMB4-201ENST00000290541 ANKRD30AQ9BXX3 1397 aa20.14■□□□□ 0.81
PSMB4-201ENST00000290541 KIF15Q9NS87 1388 aa20.14■□□□□ 0.81
PSMB4-201ENST00000290541 ASXL1Q8IXJ9 1541 aa20.13■□□□□ 0.81
PSMB4-201ENST00000290541 BRINP3Q76B58 766 aa20.13■□□□□ 0.81
PSMB4-201ENST00000290541 ARHGAP31Q2M1Z3 1444 aa20.12■□□□□ 0.81
PSMB4-201ENST00000290541 PNPLA6Q8IY17 1366 aa20.11■□□□□ 0.81
PSMB4-201ENST00000290541 YY1P25490 414 aa20.11■□□□□ 0.81
PSMB4-201ENST00000290541 BLMP54132 1417 aaPredicted RBP20.1■□□□□ 0.81
PSMB4-201ENST00000290541 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
PSMB4-201ENST00000290541 CADPS2Q86UW7 1296 aa20.1■□□□□ 0.81
PSMB4-201ENST00000290541 ATRNO75882 1429 aa20.1■□□□□ 0.81
PSMB4-201ENST00000290541 DUOX2Q9NRD8 1548 aa20.09■□□□□ 0.81
PSMB4-201ENST00000290541 TRPC5Q9UL62 973 aaPredicted RBP20.06■□□□□ 0.8
PSMB4-201ENST00000290541 HRCP23327 699 aa20.05■□□□□ 0.8
PSMB4-201ENST00000290541 DEFB132Q7Z7B7 95 aa20.05■□□□□ 0.8
PSMB4-201ENST00000290541 ADGRB3O60242 1522 aa20.05■□□□□ 0.8
PSMB4-201ENST00000290541 NAIPQ13075 1403 aa20.03■□□□□ 0.8
PSMB4-201ENST00000290541 C19orf44Q9H6X5 657 aa20.03■□□□□ 0.8
PSMB4-201ENST00000290541 USP21Q9UK80 565 aa20.03■□□□□ 0.8
PSMB4-201ENST00000290541 ERBINQ96RT1 1412 aa20.02■□□□□ 0.8
PSMB4-201ENST00000290541 ANKRD50Q9ULJ7 1429 aa20.02■□□□□ 0.8
PSMB4-201ENST00000290541 ATF3P18847 181 aa20.02■□□□□ 0.8
PSMB4-201ENST00000290541 LRRC59Q96AG4 307 aaKnown RBP20.02■□□□□ 0.8
PSMB4-201ENST00000290541 UNC13BO14795 1591 aa20.02■□□□□ 0.8
PSMB4-201ENST00000290541 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
PSMB4-201ENST00000290541 PSDA5PKW4 1024 aaPredicted RBP20■□□□□ 0.79
PSMB4-201ENST00000290541 ADAMTS2O95450 1211 aa20■□□□□ 0.79
PSMB4-201ENST00000290541 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
PSMB4-201ENST00000290541 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
PSMB4-201ENST00000290541 SPHKAPQ2M3C7 1700 aa19.99■□□□□ 0.79
PSMB4-201ENST00000290541 FNBP4Q8N3X1 1017 aaPredicted RBP19.99■□□□□ 0.79
PSMB4-201ENST00000290541 HFM1A2PYH4 1435 aa19.99■□□□□ 0.79
PSMB4-201ENST00000290541 DCCP43146 1447 aa19.99■□□□□ 0.79
PSMB4-201ENST00000290541 BRWD3Q6RI45 1802 aa19.99■□□□□ 0.79
PSMB4-201ENST00000290541 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
PSMB4-201ENST00000290541 PLEKHG1Q9ULL1 1385 aa19.97■□□□□ 0.79
PSMB4-201ENST00000290541 ZFYVE9O95405 1425 aa19.97■□□□□ 0.79
PSMB4-201ENST00000290541 MST1RQ04912 1400 aa19.97■□□□□ 0.79
PSMB4-201ENST00000290541 IDI1Q13907 227 aa19.97■□□□□ 0.79
PSMB4-201ENST00000290541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.96■□□□□ 0.79
PSMB4-201ENST00000290541 MYO5BQ9ULV0 1848 aa19.95■□□□□ 0.78
PSMB4-201ENST00000290541 PTCH1Q13635 1447 aa19.94■□□□□ 0.78
PSMB4-201ENST00000290541 LAMC1P11047 1609 aa19.94■□□□□ 0.78
PSMB4-201ENST00000290541 BCANQ96GW7 911 aa19.93■□□□□ 0.78
PSMB4-201ENST00000290541 MARF1Q9Y4F3 1742 aaKnown RBP19.92■□□□□ 0.78
PSMB4-201ENST00000290541 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.91■□□□□ 0.78
PSMB4-201ENST00000290541 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
PSMB4-201ENST00000290541 GLI3P10071 1580 aa19.91■□□□□ 0.78
PSMB4-201ENST00000290541 COL22A1Q8NFW1 1626 aaPredicted RBP19.91■□□□□ 0.78
PSMB4-201ENST00000290541 ADAMTS13Q76LX8 1427 aa19.89■□□□□ 0.77
PSMB4-201ENST00000290541 TBX22Q9Y458 520 aa19.89■□□□□ 0.77
PSMB4-201ENST00000290541 TRPM2O94759 1503 aa19.87■□□□□ 0.77
PSMB4-201ENST00000290541 NOS1P29475 1434 aa19.87■□□□□ 0.77
PSMB4-201ENST00000290541 RAB3GAP2Q9H2M9 1393 aa19.87■□□□□ 0.77
PSMB4-201ENST00000290541 SENP3-EIF4A1A0A087X0R7 540 aa19.87■□□□□ 0.77
PSMB4-201ENST00000290541 NUP155O75694 1391 aa19.85■□□□□ 0.77
PSMB4-201ENST00000290541 PIK3R4Q99570 1358 aa19.85■□□□□ 0.77
PSMB4-201ENST00000290541 SF3B2Q13435 895 aaKnown RBP19.85■□□□□ 0.77
PSMB4-201ENST00000290541 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
PSMB4-201ENST00000290541 LMTK2Q8IWU2 1503 aa19.84■□□□□ 0.77
PSMB4-201ENST00000290541 XRN1Q8IZH2 1706 aaKnown RBP19.84■□□□□ 0.77
PSMB4-201ENST00000290541 KANK1Q14678 1352 aa19.83■□□□□ 0.77
PSMB4-201ENST00000290541 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.77
PSMB4-201ENST00000290541 PTPRUQ92729 1446 aa19.83■□□□□ 0.76
PSMB4-201ENST00000290541 RIMS2Q9UQ26 1411 aa19.83■□□□□ 0.76
PSMB4-201ENST00000290541 RALGAPBQ86X10 1494 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms