RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
ACTC1-201ENST00000290378 MFAP1P55081 439 aaKnown RBP14.01□□□□□ -0.17
ACTC1-201ENST00000290378 LMOD2Q6P5Q4 547 aa14.01□□□□□ -0.17
ACTC1-201ENST00000290378 NLRP13Q86W25 1043 aa14□□□□□ -0.17
ACTC1-201ENST00000290378 RBM10P98175 930 aaKnown RBP13.99□□□□□ -0.17
ACTC1-201ENST00000290378 RALBP1Q15311 655 aa13.99□□□□□ -0.17
ACTC1-201ENST00000290378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.99□□□□□ -0.17
ACTC1-201ENST00000290378 CFAP53Q96M91 514 aa13.99□□□□□ -0.17
ACTC1-201ENST00000290378 COG6Q9Y2V7 657 aa13.98□□□□□ -0.17
ACTC1-201ENST00000290378 RRP7AQ9Y3A4 280 aaKnown RBP13.98□□□□□ -0.17
ACTC1-201ENST00000290378 FAM13BQ9NYF5 915 aa13.98□□□□□ -0.17
ACTC1-201ENST00000290378 SMG6Q86US8 1419 aaKnown RBP13.97□□□□□ -0.17
ACTC1-201ENST00000290378 DNTTIP2Q5QJE6 756 aaKnown RBP13.97□□□□□ -0.17
ACTC1-201ENST00000290378 RRAGDQ9NQL2 400 aaPredicted RBP13.97□□□□□ -0.17
ACTC1-201ENST00000290378 CENPQQ7L2Z9 268 aaPredicted RBP13.96□□□□□ -0.17
ACTC1-201ENST00000290378 CD109Q6YHK3 1445 aa13.96□□□□□ -0.17
ACTC1-201ENST00000290378 MYBBP1AQ9BQG0 1328 aaKnown RBP13.96□□□□□ -0.17
ACTC1-201ENST00000290378 U2AF1L5P0DN76 240 aaPredicted RBP13.96□□□□□ -0.17
ACTC1-201ENST00000290378 U2AF1Q01081 240 aaKnown RBP eCLIP13.96□□□□□ -0.17
ACTC1-201ENST00000290378 TRAPPC8Q9Y2L5 1435 aa13.96□□□□□ -0.18
ACTC1-201ENST00000290378 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
ACTC1-201ENST00000290378 HSP90AB1P08238 724 aaKnown RBP13.95□□□□□ -0.18
ACTC1-201ENST00000290378 ADGRL1O94910 1474 aa13.94□□□□□ -0.18
ACTC1-201ENST00000290378 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
ACTC1-201ENST00000290378 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
ACTC1-201ENST00000290378 RPRD2Q5VT52 1461 aaKnown RBP13.94□□□□□ -0.18
ACTC1-201ENST00000290378 GOLGA2Q08379 1002 aa13.93□□□□□ -0.18
ACTC1-201ENST00000290378 FANCAO15360 1455 aa13.93□□□□□ -0.18
ACTC1-201ENST00000290378 MSNP26038 577 aaKnown RBP13.92□□□□□ -0.18
ACTC1-201ENST00000290378 FBXO31Q5XUX0 539 aaPredicted RBP13.92□□□□□ -0.18
ACTC1-201ENST00000290378 PANK2Q9BZ23 570 aa13.92□□□□□ -0.18
ACTC1-201ENST00000290378 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
ACTC1-201ENST00000290378 FTSJ3Q8IY81 847 aaKnown RBP13.92□□□□□ -0.18
ACTC1-201ENST00000290378 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
ACTC1-201ENST00000290378 PTMAP06454 111 aaKnown RBP13.92□□□□□ -0.18
ACTC1-201ENST00000290378 SLC12A5Q9H2X9 1139 aa13.92□□□□□ -0.18
ACTC1-201ENST00000290378 PDE3BQ13370 1112 aa13.91□□□□□ -0.18
ACTC1-201ENST00000290378 HSCBQ8IWL3 235 aa13.91□□□□□ -0.18
ACTC1-201ENST00000290378 ASXL2Q76L83 1435 aa13.91□□□□□ -0.18
ACTC1-201ENST00000290378 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
ACTC1-201ENST00000290378 MAPK8IP3Q9UPT6 1336 aa13.91□□□□□ -0.18
ACTC1-201ENST00000290378 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
ACTC1-201ENST00000290378 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.18
ACTC1-201ENST00000290378 PANK1Q8TE04 598 aa13.9□□□□□ -0.18
ACTC1-201ENST00000290378 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
ACTC1-201ENST00000290378 RRP9O43818 475 aaKnown RBP13.9□□□□□ -0.18
ACTC1-201ENST00000290378 KDM6BO15054 1643 aa13.9□□□□□ -0.18
ACTC1-201ENST00000290378 BCAR3O75815 825 aa13.89□□□□□ -0.19
ACTC1-201ENST00000290378 APAF1O14727 1248 aa13.89□□□□□ -0.19
ACTC1-201ENST00000290378 ERCC6L2Q5T890 1561 aa13.89□□□□□ -0.19
ACTC1-201ENST00000290378 PLCH2O75038 1416 aa13.88□□□□□ -0.19
ACTC1-201ENST00000290378 HDGFL2Q7Z4V5 671 aaPredicted RBP13.88□□□□□ -0.19
ACTC1-201ENST00000290378 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
ACTC1-201ENST00000290378 ERBINQ96RT1 1412 aa13.87□□□□□ -0.19
ACTC1-201ENST00000290378 GOLGA6L22H0YM25 854 aa13.87□□□□□ -0.19
ACTC1-201ENST00000290378 FOXD4L5Q5VV16 416 aaPredicted RBP13.87□□□□□ -0.19
ACTC1-201ENST00000290378 FOXD4L4Q8WXT5 416 aaPredicted RBP13.87□□□□□ -0.19
ACTC1-201ENST00000290378 PRDM10Q9NQV6 1147 aa13.87□□□□□ -0.19
ACTC1-201ENST00000290378 TRAK2O60296 914 aa13.85□□□□□ -0.19
ACTC1-201ENST00000290378 HDGFP51858 240 aaKnown RBP13.85□□□□□ -0.19
ACTC1-201ENST00000290378 IDI1Q13907 227 aa13.84□□□□□ -0.19
ACTC1-201ENST00000290378 PZPP20742 1482 aa13.84□□□□□ -0.19
ACTC1-201ENST00000290378 PRAM1Q96QH2 718 aa13.83□□□□□ -0.19
ACTC1-201ENST00000290378 MPNDQ8N594 471 aa13.83□□□□□ -0.2
ACTC1-201ENST00000290378 EVC2Q86UK5 1308 aa13.83□□□□□ -0.2
ACTC1-201ENST00000290378 ZHX1Q9UKY1 873 aaPredicted RBP13.83□□□□□ -0.2
ACTC1-201ENST00000290378 CEBPAP49715 358 aaPredicted RBP13.83□□□□□ -0.2
ACTC1-201ENST00000290378 MAPK8IP2Q13387 824 aaPredicted RBP13.82□□□□□ -0.2
ACTC1-201ENST00000290378 TERF2IPQ9NYB0 399 aa13.82□□□□□ -0.2
ACTC1-201ENST00000290378 APBB1O00213 710 aa13.82□□□□□ -0.2
ACTC1-201ENST00000290378 FOXD4L6Q3SYB3 417 aaPredicted RBP13.82□□□□□ -0.2
ACTC1-201ENST00000290378 FOXD4L3Q6VB84 417 aaPredicted RBP13.82□□□□□ -0.2
ACTC1-201ENST00000290378 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
ACTC1-201ENST00000290378 R3HCC1Q9Y3T6 440 aaKnown RBP13.81□□□□□ -0.2
ACTC1-201ENST00000290378 SLC26A8Q96RN1 970 aa13.81□□□□□ -0.2
ACTC1-201ENST00000290378 ABCC2Q92887 1545 aa13.81□□□□□ -0.2
ACTC1-201ENST00000290378 SEC24BO95487 1268 aa13.81□□□□□ -0.2
ACTC1-201ENST00000290378 DNMT1P26358 1616 aaKnown RBP13.81□□□□□ -0.2
ACTC1-201ENST00000290378 WDR7Q9Y4E6 1490 aa13.81□□□□□ -0.2
ACTC1-201ENST00000290378 A0A0G2JS52 829 aa13.8□□□□□ -0.2
ACTC1-201ENST00000290378 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
ACTC1-201ENST00000290378 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
ACTC1-201ENST00000290378 XRCC6P12956 609 aaKnown RBP eCLIP13.8□□□□□ -0.2
ACTC1-201ENST00000290378 ESPNB1AK53 854 aa13.8□□□□□ -0.2
ACTC1-201ENST00000290378 KIAA1211Q6ZU35 1233 aa13.8□□□□□ -0.2
ACTC1-201ENST00000290378 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
ACTC1-201ENST00000290378 ELL2O00472 640 aaPredicted RBP13.79□□□□□ -0.2
ACTC1-201ENST00000290378 PPP2R1AP30153 589 aa13.79□□□□□ -0.2
ACTC1-201ENST00000290378 NGDNQ8NEJ9 315 aaKnown RBP13.79□□□□□ -0.2
ACTC1-201ENST00000290378 DISP3Q9P2K9 1392 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 DDX49Q9Y6V7 483 aaKnown RBP13.78□□□□□ -0.2
ACTC1-201ENST00000290378 DHX29Q7Z478 1369 aaKnown RBP13.78□□□□□ -0.2
ACTC1-201ENST00000290378 MTHFSP49914 203 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 WAPLQ7Z5K2 1190 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 ITPRIPQ8IWB1 547 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
ACTC1-201ENST00000290378 FAM135AQ9P2D6 1515 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 CGNL1Q0VF96 1302 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 CHD1O14646 1710 aa13.78□□□□□ -0.2
ACTC1-201ENST00000290378 CDK11BP21127 795 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms