RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 NLRP13Q86W25 1043 aa17.09■□□□□ 0.33
ZIC3-201ENST00000287538 POGKQ9P215 609 aa17.09■□□□□ 0.33
ZIC3-201ENST00000287538 SLC12A5Q9H2X9 1139 aa17.08■□□□□ 0.33
ZIC3-201ENST00000287538 E9PCH4 1651 aa17.08■□□□□ 0.32
ZIC3-201ENST00000287538 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
ZIC3-201ENST00000287538 WDR43Q15061 677 aaKnown RBP eCLIP17.07■□□□□ 0.32
ZIC3-201ENST00000287538 ANP32AP39687 249 aaKnown RBP17.06■□□□□ 0.32
ZIC3-201ENST00000287538 CCDC146Q8IYE0 955 aa17.06■□□□□ 0.32
ZIC3-201ENST00000287538 NPATQ14207 1427 aa17.06■□□□□ 0.32
ZIC3-201ENST00000287538 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
ZIC3-201ENST00000287538 CABP2Q9NPB3 220 aa17.06■□□□□ 0.32
ZIC3-201ENST00000287538 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
ZIC3-201ENST00000287538 PER1O15534 1290 aaPredicted RBP17.05■□□□□ 0.32
ZIC3-201ENST00000287538 NEUROD2Q15784 382 aa17.05■□□□□ 0.32
ZIC3-201ENST00000287538 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
ZIC3-201ENST00000287538 PRDM15P57071 1507 aaPredicted RBP17.05■□□□□ 0.32
ZIC3-201ENST00000287538 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.05■□□□□ 0.32
ZIC3-201ENST00000287538 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
ZIC3-201ENST00000287538 KIDINS220Q9ULH0 1771 aa17.04■□□□□ 0.32
ZIC3-201ENST00000287538 ARAP3Q8WWN8 1544 aa17.04■□□□□ 0.32
ZIC3-201ENST00000287538 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
ZIC3-201ENST00000287538 ZBED9Q6R2W3 1325 aa17.03■□□□□ 0.32
ZIC3-201ENST00000287538 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
ZIC3-201ENST00000287538 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.32
ZIC3-201ENST00000287538 CDCA7LQ96GN5 454 aa17.02■□□□□ 0.32
ZIC3-201ENST00000287538 NUTM2FA1L443 756 aa17.02■□□□□ 0.31
ZIC3-201ENST00000287538 CEBPAP49715 358 aaPredicted RBP17.02■□□□□ 0.31
ZIC3-201ENST00000287538 INO80Q9ULG1 1556 aaPredicted RBP17.01■□□□□ 0.31
ZIC3-201ENST00000287538 PTPRTO14522 1441 aa17.01■□□□□ 0.31
ZIC3-201ENST00000287538 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
ZIC3-201ENST00000287538 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
ZIC3-201ENST00000287538 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
ZIC3-201ENST00000287538 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
ZIC3-201ENST00000287538 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
ZIC3-201ENST00000287538 GPRASP1Q5JY77 1395 aa16.99■□□□□ 0.31
ZIC3-201ENST00000287538 SCAF11Q99590 1463 aaKnown RBP16.98■□□□□ 0.31
ZIC3-201ENST00000287538 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
ZIC3-201ENST00000287538 MORC1Q86VD1 984 aa16.98■□□□□ 0.31
ZIC3-201ENST00000287538 TRPM1Q7Z4N2 1603 aa16.98■□□□□ 0.31
ZIC3-201ENST00000287538 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
ZIC3-201ENST00000287538 TRPM2O94759 1503 aa16.98■□□□□ 0.31
ZIC3-201ENST00000287538 CEP152O94986 1710 aa16.97■□□□□ 0.31
ZIC3-201ENST00000287538 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
ZIC3-201ENST00000287538 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
ZIC3-201ENST00000287538 PRAM1Q96QH2 718 aa16.97■□□□□ 0.31
ZIC3-201ENST00000287538 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
ZIC3-201ENST00000287538 NEO1Q92859 1461 aa16.96■□□□□ 0.31
ZIC3-201ENST00000287538 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
ZIC3-201ENST00000287538 SLC52A1Q9NWF4 448 aa16.95■□□□□ 0.3
ZIC3-201ENST00000287538 HECW2Q9P2P5 1572 aa16.95■□□□□ 0.3
ZIC3-201ENST00000287538 CARD14Q9BXL6 1004 aa16.95■□□□□ 0.3
ZIC3-201ENST00000287538 NUDCQ9Y266 331 aa16.95■□□□□ 0.3
ZIC3-201ENST00000287538 SPHKAPQ2M3C7 1700 aa16.95■□□□□ 0.3
ZIC3-201ENST00000287538 TET3O43151 1660 aa16.94■□□□□ 0.3
ZIC3-201ENST00000287538 COL17A1Q9UMD9 1497 aaPredicted RBP16.94■□□□□ 0.3
ZIC3-201ENST00000287538 BRD4O60885 1362 aaPredicted RBP16.94■□□□□ 0.3
ZIC3-201ENST00000287538 PLIN1O60240 522 aa16.93■□□□□ 0.3
ZIC3-201ENST00000287538 AMER1Q5JTC6 1135 aaPredicted RBP16.93■□□□□ 0.3
ZIC3-201ENST00000287538 RRP7AQ9Y3A4 280 aaKnown RBP16.93■□□□□ 0.3
ZIC3-201ENST00000287538 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
ZIC3-201ENST00000287538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.92■□□□□ 0.3
ZIC3-201ENST00000287538 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
ZIC3-201ENST00000287538 PLEKHG5O94827 1062 aa16.91■□□□□ 0.3
ZIC3-201ENST00000287538 EFCAB6Q5THR3 1501 aa16.91■□□□□ 0.3
ZIC3-201ENST00000287538 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
ZIC3-201ENST00000287538 NPM2Q86SE8 214 aaKnown RBP16.9■□□□□ 0.3
ZIC3-201ENST00000287538 TXNDC2Q86VQ3 553 aa16.9■□□□□ 0.3
ZIC3-201ENST00000287538 FRMPD1Q5SYB0 1578 aa16.9■□□□□ 0.3
ZIC3-201ENST00000287538 MROH1Q8NDA8 1641 aa16.89■□□□□ 0.29
ZIC3-201ENST00000287538 APAF1O14727 1248 aa16.89■□□□□ 0.29
ZIC3-201ENST00000287538 LAS1LQ9Y4W2 734 aaKnown RBP16.89■□□□□ 0.29
ZIC3-201ENST00000287538 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
ZIC3-201ENST00000287538 EIF2AK4Q9P2K8 1649 aaKnown RBP16.88■□□□□ 0.29
ZIC3-201ENST00000287538 PARD3Q8TEW0 1356 aa16.88■□□□□ 0.29
ZIC3-201ENST00000287538 SOX12O15370 315 aa16.88■□□□□ 0.29
ZIC3-201ENST00000287538 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
ZIC3-201ENST00000287538 ABCC3O15438 1527 aa16.88■□□□□ 0.29
ZIC3-201ENST00000287538 FBLN1P23142 703 aa16.88■□□□□ 0.29
ZIC3-201ENST00000287538 U2SURPO15042 1029 aaKnown RBP16.87■□□□□ 0.29
ZIC3-201ENST00000287538 NEFMP07197 916 aa16.87■□□□□ 0.29
ZIC3-201ENST00000287538 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
ZIC3-201ENST00000287538 SLC26A8Q96RN1 970 aa16.86■□□□□ 0.29
ZIC3-201ENST00000287538 UBE2Q2Q8WVN8 375 aa16.86■□□□□ 0.29
ZIC3-201ENST00000287538 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
ZIC3-201ENST00000287538 RCAN3Q9UKA8 241 aa16.86■□□□□ 0.29
ZIC3-201ENST00000287538 KIF1BO60333 1816 aa16.85■□□□□ 0.29
ZIC3-201ENST00000287538 CFAP74Q9C0B2 1584 aa16.85■□□□□ 0.29
ZIC3-201ENST00000287538 DIP2CQ9Y2E4 1556 aa16.85■□□□□ 0.29
ZIC3-201ENST00000287538 MTHFSP49914 203 aa16.84■□□□□ 0.29
ZIC3-201ENST00000287538 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
ZIC3-201ENST00000287538 DEPDC5O75140 1603 aa16.83■□□□□ 0.29
ZIC3-201ENST00000287538 NSD3Q9BZ95 1437 aa16.83■□□□□ 0.28
ZIC3-201ENST00000287538 CDK19Q9BWU1 502 aa16.83■□□□□ 0.28
ZIC3-201ENST00000287538 SLC24A1O60721 1099 aa16.82■□□□□ 0.28
ZIC3-201ENST00000287538 NCKAP5LQ9HCH0 1330 aa16.82■□□□□ 0.28
ZIC3-201ENST00000287538 U2AF1L5P0DN76 240 aaPredicted RBP16.82■□□□□ 0.28
ZIC3-201ENST00000287538 U2AF1Q01081 240 aaKnown RBP eCLIP16.82■□□□□ 0.28
ZIC3-201ENST00000287538 VWDEQ8N2E2 1590 aa16.82■□□□□ 0.28
ZIC3-201ENST00000287538 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
ZIC3-201ENST00000287538 MROH2AA6NES4 1674 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms