RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 AGLP35573 1532 aa13.58□□□□□ -0.24
PPP4R1-201ENST00000285124 ARHGAP31Q2M1Z3 1444 aa13.57□□□□□ -0.24
PPP4R1-201ENST00000285124 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
PPP4R1-201ENST00000285124 C14orf93Q9H972 538 aaKnown RBP13.57□□□□□ -0.24
PPP4R1-201ENST00000285124 LTKP29376 864 aa13.56□□□□□ -0.24
PPP4R1-201ENST00000285124 POGKQ9P215 609 aa13.56□□□□□ -0.24
PPP4R1-201ENST00000285124 SYNMO15061 1565 aa13.55□□□□□ -0.24
PPP4R1-201ENST00000285124 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
PPP4R1-201ENST00000285124 SENP3-EIF4A1A0A087X0R7 540 aa13.55□□□□□ -0.24
PPP4R1-201ENST00000285124 TMC1Q8TDI8 760 aa13.55□□□□□ -0.24
PPP4R1-201ENST00000285124 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
PPP4R1-201ENST00000285124 TMF1P82094 1093 aa13.54□□□□□ -0.24
PPP4R1-201ENST00000285124 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
PPP4R1-201ENST00000285124 TESK2Q96S53 571 aa13.54□□□□□ -0.24
PPP4R1-201ENST00000285124 MINK1Q8N4C8 1332 aaPredicted RBP13.54□□□□□ -0.24
PPP4R1-201ENST00000285124 NUTM2FA1L443 756 aa13.53□□□□□ -0.24
PPP4R1-201ENST00000285124 RBM33Q96EV2 1170 aaKnown RBP13.53□□□□□ -0.24
PPP4R1-201ENST00000285124 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
PPP4R1-201ENST00000285124 EID1Q9Y6B2 187 aa13.52□□□□□ -0.24
PPP4R1-201ENST00000285124 PRAM1Q96QH2 718 aa13.52□□□□□ -0.25
PPP4R1-201ENST00000285124 DISP3Q9P2K9 1392 aa13.51□□□□□ -0.25
PPP4R1-201ENST00000285124 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
PPP4R1-201ENST00000285124 HDGFP51858 240 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 CC2D1BQ5T0F9 858 aaKnown RBP13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 PANK3Q9H999 370 aa13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 CENPJQ9HC77 1338 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 THEMISQ8N1K5 641 aaPredicted RBP13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 CABP2Q9NPB3 220 aa13.5□□□□□ -0.25
PPP4R1-201ENST00000285124 KIF1BO60333 1816 aa13.49□□□□□ -0.25
PPP4R1-201ENST00000285124 HSPA2P54652 639 aa13.49□□□□□ -0.25
PPP4R1-201ENST00000285124 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
PPP4R1-201ENST00000285124 REREQ9P2R6 1566 aa13.49□□□□□ -0.25
PPP4R1-201ENST00000285124 PREX1Q8TCU6 1659 aa13.48□□□□□ -0.25
PPP4R1-201ENST00000285124 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPP4R1-201ENST00000285124 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
PPP4R1-201ENST00000285124 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
PPP4R1-201ENST00000285124 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
PPP4R1-201ENST00000285124 GPRASP1Q5JY77 1395 aa13.47□□□□□ -0.25
PPP4R1-201ENST00000285124 BCORL1Q5H9F3 1711 aa13.47□□□□□ -0.25
PPP4R1-201ENST00000285124 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.25
PPP4R1-201ENST00000285124 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
PPP4R1-201ENST00000285124 PIK3C2GO75747 1445 aa13.45□□□□□ -0.26
PPP4R1-201ENST00000285124 SCAF11Q99590 1463 aaKnown RBP13.45□□□□□ -0.26
PPP4R1-201ENST00000285124 TMEM2Q9UHN6 1383 aa13.45□□□□□ -0.26
PPP4R1-201ENST00000285124 FAM9BQ8IZU0 186 aa13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 METP08581 1390 aa13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 TNNT2P45379 298 aaPredicted RBP13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 MADDQ8WXG6 1647 aa13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
PPP4R1-201ENST00000285124 MYO5BQ9ULV0 1848 aa13.42□□□□□ -0.26
PPP4R1-201ENST00000285124 NCKAP5LQ9HCH0 1330 aa13.42□□□□□ -0.26
PPP4R1-201ENST00000285124 PRKRIP1Q9H875 184 aaPredicted RBP13.42□□□□□ -0.26
PPP4R1-201ENST00000285124 SPATA31D1Q6ZQQ2 1576 aa13.42□□□□□ -0.26
PPP4R1-201ENST00000285124 NEXMIFQ5QGS0 1516 aa13.42□□□□□ -0.26
PPP4R1-201ENST00000285124 ANKLE2Q86XL3 938 aa13.42□□□□□ -0.26
PPP4R1-201ENST00000285124 MYOM2P54296 1465 aa13.41□□□□□ -0.26
PPP4R1-201ENST00000285124 TMEM131LA2VDJ0 1609 aa13.41□□□□□ -0.26
PPP4R1-201ENST00000285124 MRS2Q9HD23 443 aa13.41□□□□□ -0.26
PPP4R1-201ENST00000285124 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
PPP4R1-201ENST00000285124 PLEKHH1Q9ULM0 1364 aa13.41□□□□□ -0.26
PPP4R1-201ENST00000285124 KDM4FA0A1W2PPD8 638 aa13.4□□□□□ -0.26
PPP4R1-201ENST00000285124 AMOTL2Q9Y2J4 779 aa13.4□□□□□ -0.26
PPP4R1-201ENST00000285124 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
PPP4R1-201ENST00000285124 PLEKHG5O94827 1062 aa13.39□□□□□ -0.27
PPP4R1-201ENST00000285124 RIMS1Q86UR5 1692 aaKnown RBP13.39□□□□□ -0.27
PPP4R1-201ENST00000285124 CDK19Q9BWU1 502 aa13.39□□□□□ -0.27
PPP4R1-201ENST00000285124 C14orf37Q86TY3 774 aa13.38□□□□□ -0.27
PPP4R1-201ENST00000285124 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
PPP4R1-201ENST00000285124 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
PPP4R1-201ENST00000285124 FER1L4A9Z1Z3 1794 aa13.38□□□□□ -0.27
PPP4R1-201ENST00000285124 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
PPP4R1-201ENST00000285124 NRXN1Q9ULB1 1477 aa13.36□□□□□ -0.27
PPP4R1-201ENST00000285124 KCNA6P17658 529 aa13.36□□□□□ -0.27
PPP4R1-201ENST00000285124 C3P01024 1663 aa13.36□□□□□ -0.27
PPP4R1-201ENST00000285124 ZFYVE9O95405 1425 aa13.35□□□□□ -0.27
PPP4R1-201ENST00000285124 SALL2Q9Y467 1007 aaPredicted RBP13.35□□□□□ -0.27
PPP4R1-201ENST00000285124 PPLO60437 1756 aa13.34□□□□□ -0.27
PPP4R1-201ENST00000285124 PER1O15534 1290 aaPredicted RBP13.34□□□□□ -0.27
PPP4R1-201ENST00000285124 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.34□□□□□ -0.278e-7■■■□□ 19
PPP4R1-201ENST00000285124 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
PPP4R1-201ENST00000285124 PTPRMP28827 1452 aa13.34□□□□□ -0.27
PPP4R1-201ENST00000285124 NLRP1Q9C000 1473 aa13.34□□□□□ -0.27
PPP4R1-201ENST00000285124 ALKQ9UM73 1620 aa13.33□□□□□ -0.28
PPP4R1-201ENST00000285124 PMFBP1Q8TBY8 1022 aa13.32□□□□□ -0.28
PPP4R1-201ENST00000285124 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
PPP4R1-201ENST00000285124 HNRNPUQ00839 825 aaKnown RBP eCLIP13.31□□□□□ -0.28
PPP4R1-201ENST00000285124 ROBO2Q9HCK4 1378 aa13.31□□□□□ -0.28
PPP4R1-201ENST00000285124 TBX22Q9Y458 520 aa13.31□□□□□ -0.28
PPP4R1-201ENST00000285124 SOX12O15370 315 aa13.3□□□□□ -0.28
PPP4R1-201ENST00000285124 FBLN1P23142 703 aa13.3□□□□□ -0.28
PPP4R1-201ENST00000285124 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
PPP4R1-201ENST00000285124 GGNBP2Q9H3C7 697 aa13.3□□□□□ -0.28
PPP4R1-201ENST00000285124 LRPPRCP42704 1394 aaKnown RBP13.3□□□□□ -0.28
PPP4R1-201ENST00000285124 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
PPP4R1-201ENST00000285124 WASLO00401 505 aaPredicted RBP13.29□□□□□ -0.28
PPP4R1-201ENST00000285124 SLC24A1O60721 1099 aa13.29□□□□□ -0.28
PPP4R1-201ENST00000285124 PLEKHG1Q9ULL1 1385 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms