RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ANKRD18AQ8IVF6 992 aa10.59□□□□□ -0.71
NIPBL-201ENST00000282516 ANO2Q9NQ90 1003 aa10.59□□□□□ -0.71
NIPBL-201ENST00000282516 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
NIPBL-201ENST00000282516 RAD21O60216 631 aa10.58□□□□□ -0.72
NIPBL-201ENST00000282516 HSPA5P11021 654 aaKnown RBP10.58□□□□□ -0.72
NIPBL-201ENST00000282516 TRDNQ13061 729 aa10.58□□□□□ -0.72
NIPBL-201ENST00000282516 EZRP15311 586 aaKnown RBP10.58□□□□□ -0.72
NIPBL-201ENST00000282516 BRMS1Q9HCU9 246 aa10.58□□□□□ -0.72
NIPBL-201ENST00000282516 SASS6Q6UVJ0 657 aa10.58□□□□□ -0.72
NIPBL-201ENST00000282516 OLFM4Q6UX06 510 aa10.58□□□□□ -0.72
NIPBL-201ENST00000282516 TSPYL1Q9H0U9 437 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 CCDC39Q9UFE4 941 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 ERLIN2O94905 339 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 GOLGA6L10A6NI86 522 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 VPS37DQ86XT2 251 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 FAM43AQ8N2R8 423 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 NFXL1Q6ZNB6 911 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 LEKR1Q6ZMV7 388 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 KIF15Q9NS87 1388 aa10.57□□□□□ -0.72
NIPBL-201ENST00000282516 ZFYVE27Q5T4F4 411 aa10.56□□□□□ -0.72
NIPBL-201ENST00000282516 MLECQ14165 292 aa10.56□□□□□ -0.72
NIPBL-201ENST00000282516 ERICH2A1L162 156 aa10.56□□□□□ -0.72
NIPBL-201ENST00000282516 STK11IPQ8N1F8 1099 aa10.56□□□□□ -0.72
NIPBL-201ENST00000282516 KIAA0754O94854 1291 aa10.56□□□□□ -0.72
NIPBL-201ENST00000282516 AMPHP49418 695 aa10.55□□□□□ -0.72
NIPBL-201ENST00000282516 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
NIPBL-201ENST00000282516 FOXD4L6Q3SYB3 417 aaPredicted RBP10.55□□□□□ -0.72
NIPBL-201ENST00000282516 FOXD4L3Q6VB84 417 aaPredicted RBP10.55□□□□□ -0.72
NIPBL-201ENST00000282516 KIF7Q2M1P5 1343 aa10.55□□□□□ -0.72
NIPBL-201ENST00000282516 CLUAP1Q96AJ1 413 aa10.54□□□□□ -0.72
NIPBL-201ENST00000282516 PAF1Q8N7H5 531 aa10.54□□□□□ -0.72
NIPBL-201ENST00000282516 PLCD4Q9BRC7 762 aa10.54□□□□□ -0.72
NIPBL-201ENST00000282516 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
NIPBL-201ENST00000282516 C1orf141Q5JVX7 400 aa10.54□□□□□ -0.72
NIPBL-201ENST00000282516 AXDND1Q5T1B0 1012 aaPredicted RBP10.54□□□□□ -0.72
NIPBL-201ENST00000282516 TXLNBQ8N3L3 684 aa10.53□□□□□ -0.72
NIPBL-201ENST00000282516 DHX8Q14562 1220 aaKnown RBP10.53□□□□□ -0.72
NIPBL-201ENST00000282516 IFIT2P09913 472 aaKnown RBP10.53□□□□□ -0.72
NIPBL-201ENST00000282516 ANKRD45Q5TZF3 282 aa10.53□□□□□ -0.72
NIPBL-201ENST00000282516 C9orf78Q9NZ63 289 aaPredicted RBP10.53□□□□□ -0.72
NIPBL-201ENST00000282516 PKD2Q13563 968 aa10.53□□□□□ -0.72
NIPBL-201ENST00000282516 SMARCE1Q969G3 411 aa10.53□□□□□ -0.72
NIPBL-201ENST00000282516 UACAQ9BZF9 1416 aa10.52□□□□□ -0.72
NIPBL-201ENST00000282516 EID1Q9Y6B2 187 aa10.52□□□□□ -0.72
NIPBL-201ENST00000282516 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
NIPBL-201ENST00000282516 NUCB2P80303 420 aa10.52□□□□□ -0.73
NIPBL-201ENST00000282516 SEPT7Q16181 437 aaKnown RBP10.52□□□□□ -0.73
NIPBL-201ENST00000282516 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
NIPBL-201ENST00000282516 NGDNQ8NEJ9 315 aaKnown RBP10.52□□□□□ -0.73
NIPBL-201ENST00000282516 ANKRD30AQ9BXX3 1397 aa10.52□□□□□ -0.73
NIPBL-201ENST00000282516 ENOX2Q16206 610 aaKnown RBP10.52□□□□□ -0.73
NIPBL-201ENST00000282516 PDILTQ8N807 584 aa10.52□□□□□ -0.73
NIPBL-201ENST00000282516 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
NIPBL-201ENST00000282516 PIP4K2AP48426 406 aaPredicted RBP10.52□□□□□ -0.73
NIPBL-201ENST00000282516 XBP1P17861 261 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 ZKSCAN2Q63HK3 967 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 LUC7LQ9NQ29 371 aaKnown RBP10.51□□□□□ -0.73
NIPBL-201ENST00000282516 CT47B1P0C2W7 299 aaPredicted RBP10.51□□□□□ -0.73
NIPBL-201ENST00000282516 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 SMC3Q9UQE7 1217 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 RABEP1Q15276 862 aa10.51□□□□□ -0.73
NIPBL-201ENST00000282516 DYDC1Q8WWB3 177 aa10.5□□□□□ -0.73
NIPBL-201ENST00000282516 USP8P40818 1118 aa10.5□□□□□ -0.73
NIPBL-201ENST00000282516 NASPP49321 788 aaPredicted RBP10.5□□□□□ -0.73
NIPBL-201ENST00000282516 HMGN5P82970 282 aaKnown RBP10.5□□□□□ -0.73
NIPBL-201ENST00000282516 SYCP1Q15431 976 aa10.5□□□□□ -0.73
NIPBL-201ENST00000282516 IQCEQ6IPM2 695 aa10.5□□□□□ -0.73
NIPBL-201ENST00000282516 ERC2O15083 957 aa10.5□□□□□ -0.73
NIPBL-201ENST00000282516 LETM1O95202 739 aaPredicted RBP10.5□□□□□ -0.73
NIPBL-201ENST00000282516 MAGEC2Q9UBF1 373 aaPredicted RBP10.5□□□□□ -0.73
NIPBL-201ENST00000282516 RALYLQ86SE5 291 aaKnown RBP10.49□□□□□ -0.73
NIPBL-201ENST00000282516 WASHC2AQ641Q2 1341 aa10.49□□□□□ -0.73
NIPBL-201ENST00000282516 NEFHP12036 1026 aa10.49□□□□□ -0.73
NIPBL-201ENST00000282516 NUP155O75694 1391 aa10.49□□□□□ -0.73
NIPBL-201ENST00000282516 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
NIPBL-201ENST00000282516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.49□□□□□ -0.73
NIPBL-201ENST00000282516 CARMIL2Q6F5E8 1435 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 E9PSI1 815 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 TXLNAP40222 546 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 DDX19BQ9UMR2 479 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 TRHP20396 242 aaPredicted RBP10.48□□□□□ -0.73
NIPBL-201ENST00000282516 GBP2P32456 591 aaPredicted RBP10.48□□□□□ -0.73
NIPBL-201ENST00000282516 MYO15BQ96JP2 1530 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 MYBBP1AQ9BQG0 1328 aaKnown RBP10.48□□□□□ -0.73
NIPBL-201ENST00000282516 CHMP5Q9NZZ3 219 aa10.48□□□□□ -0.73
NIPBL-201ENST00000282516 KINO60870 393 aaKnown RBP10.48□□□□□ -0.73
NIPBL-201ENST00000282516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.48□□□□□ -0.733e-6■■■■□ 21.4
NIPBL-201ENST00000282516 FMN1Q68DA7 1419 aa10.47□□□□□ -0.73
NIPBL-201ENST00000282516 DDX58O95786 925 aaKnown RBP10.47□□□□□ -0.73
NIPBL-201ENST00000282516 INTS3Q68E01 1043 aaKnown RBP10.47□□□□□ -0.73
NIPBL-201ENST00000282516 ZNHIT6Q9NWK9 470 aaKnown RBP10.47□□□□□ -0.73
NIPBL-201ENST00000282516 G3BP1Q13283 466 aaKnown RBP eCLIP10.47□□□□□ -0.73
NIPBL-201ENST00000282516 LTV1Q96GA3 475 aaPredicted RBP10.47□□□□□ -0.73
NIPBL-201ENST00000282516 CDK5RAP3Q96JB5 506 aa10.47□□□□□ -0.73
NIPBL-201ENST00000282516 PDE4AP27815 886 aa10.47□□□□□ -0.73
NIPBL-201ENST00000282516 SMC2O95347 1197 aa10.47□□□□□ -0.73
NIPBL-201ENST00000282516 SART3Q15020 963 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms