RNA–Protein interactions for RNA: ENST00000282077.7

PDK1-201, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 14,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-201ENST00000282077 CCDC144AA2RUR9 1427 aa14.13□□□□□ -0.15
PDK1-201ENST00000282077 CNKSR2Q8WXI2 1034 aa14.13□□□□□ -0.15
PDK1-201ENST00000282077 TRDNQ13061 729 aa14.13□□□□□ -0.15
PDK1-201ENST00000282077 CPLX1O14810 134 aa14.13□□□□□ -0.15
PDK1-201ENST00000282077 EPS15P42566 896 aa14.13□□□□□ -0.15
PDK1-201ENST00000282077 HSP90B2PQ58FF3 399 aa14.13□□□□□ -0.15
PDK1-201ENST00000282077 MTERF4Q7Z6M4 381 aaKnown RBP14.13□□□□□ -0.15
PDK1-201ENST00000282077 SASS6Q6UVJ0 657 aa14.12□□□□□ -0.15
PDK1-201ENST00000282077 ERICH2A1L162 156 aa14.12□□□□□ -0.15
PDK1-201ENST00000282077 ANO8Q9HCE9 1232 aaPredicted RBP14.12□□□□□ -0.15
PDK1-201ENST00000282077 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
PDK1-201ENST00000282077 CT47A1Q5JQC4 288 aaPredicted RBP14.12□□□□□ -0.15
PDK1-201ENST00000282077 ZKSCAN2Q63HK3 967 aa14.12□□□□□ -0.15
PDK1-201ENST00000282077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.12□□□□□ -0.156e-7■□□□□ 10.6
PDK1-201ENST00000282077 VPS37DQ86XT2 251 aa14.11□□□□□ -0.15
PDK1-201ENST00000282077 C9orf78Q9NZ63 289 aaPredicted RBP14.11□□□□□ -0.15
PDK1-201ENST00000282077 RSPH4AQ5TD94 716 aa14.11□□□□□ -0.15
PDK1-201ENST00000282077 ANO2Q9NQ90 1003 aa14.11□□□□□ -0.15
PDK1-201ENST00000282077 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.11□□□□□ -0.15
PDK1-201ENST00000282077 MAP7D2Q96T17 732 aa14.11□□□□□ -0.15
PDK1-201ENST00000282077 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
PDK1-201ENST00000282077 CCDC191Q8NCU4 936 aa14.1□□□□□ -0.15
PDK1-201ENST00000282077 TSHZ2Q9NRE2 1034 aa14.1□□□□□ -0.15
PDK1-201ENST00000282077 BICD2Q8TD16 824 aa14.1□□□□□ -0.15
PDK1-201ENST00000282077 ZBED9Q6R2W3 1325 aa14.1□□□□□ -0.15
PDK1-201ENST00000282077 NAP1L1P55209 391 aaKnown RBP14.1□□□□□ -0.15
PDK1-201ENST00000282077 SAFBQ15424 915 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDK1-201ENST00000282077 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
PDK1-201ENST00000282077 CUX1P39880 1505 aa14.09□□□□□ -0.15
PDK1-201ENST00000282077 APPP05067 770 aa14.09□□□□□ -0.15
PDK1-201ENST00000282077 FOXD4L6Q3SYB3 417 aaPredicted RBP14.09□□□□□ -0.15
PDK1-201ENST00000282077 FOXD4L3Q6VB84 417 aaPredicted RBP14.09□□□□□ -0.15
PDK1-201ENST00000282077 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.09□□□□□ -0.152e-7■■■■■ 68.6
PDK1-201ENST00000282077 NINLQ9Y2I6 1382 aa14.08□□□□□ -0.15
PDK1-201ENST00000282077 BRMS1Q9HCU9 246 aa14.08□□□□□ -0.16
PDK1-201ENST00000282077 EVC2Q86UK5 1308 aa14.08□□□□□ -0.16
PDK1-201ENST00000282077 OLFM4Q6UX06 510 aa14.08□□□□□ -0.16
PDK1-201ENST00000282077 NUCB2P80303 420 aa14.08□□□□□ -0.16
PDK1-201ENST00000282077 TTC5Q8N0Z6 440 aa14.08□□□□□ -0.16
PDK1-201ENST00000282077 IFIT2P09913 472 aaKnown RBP14.07□□□□□ -0.16
PDK1-201ENST00000282077 NFXL1Q6ZNB6 911 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 MNS1Q8NEH6 495 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 ERCC4Q92889 916 aaPredicted RBP14.07□□□□□ -0.16
PDK1-201ENST00000282077 PDE4AP27815 886 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 TOP2AP11388 1531 aaKnown RBP14.07□□□□□ -0.16
PDK1-201ENST00000282077 COG3Q96JB2 828 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 SOGA1O94964 1423 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 RRP1P56182 461 aaKnown RBP14.07□□□□□ -0.16
PDK1-201ENST00000282077 VSIG10Q8N0Z9 540 aa14.07□□□□□ -0.16
PDK1-201ENST00000282077 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
PDK1-201ENST00000282077 NGEFQ8N5V2 710 aa14.06□□□□□ -0.16
PDK1-201ENST00000282077 WASHC2CQ9Y4E1 1318 aa14.06□□□□□ -0.16
PDK1-201ENST00000282077 IFT57Q9NWB7 429 aa14.06□□□□□ -0.16
PDK1-201ENST00000282077 INTS3Q68E01 1043 aaKnown RBP14.06□□□□□ -0.16
PDK1-201ENST00000282077 LTV1Q96GA3 475 aaPredicted RBP14.06□□□□□ -0.16
PDK1-201ENST00000282077 WWC1Q8IX03 1113 aa14.06□□□□□ -0.16
PDK1-201ENST00000282077 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
PDK1-201ENST00000282077 CCP110O43303 1012 aa14.06□□□□□ -0.16
PDK1-201ENST00000282077 RAD21O60216 631 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
PDK1-201ENST00000282077 EVA1CP58658 441 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 FAM13BQ9NYF5 915 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 CCDC73Q6ZRK6 1079 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 ZRSR2Q15696 482 aaKnown RBP14.05□□□□□ -0.16
PDK1-201ENST00000282077 CAGE1Q8TC20 777 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 CCDC39Q9UFE4 941 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 FAM43AQ8N2R8 423 aa14.05□□□□□ -0.16
PDK1-201ENST00000282077 ERC2O15083 957 aa14.04□□□□□ -0.16
PDK1-201ENST00000282077 TEFQ10587 303 aa14.04□□□□□ -0.16
PDK1-201ENST00000282077 SMC3Q9UQE7 1217 aa14.04□□□□□ -0.16
PDK1-201ENST00000282077 XBP1P17861 261 aa14.04□□□□□ -0.16
PDK1-201ENST00000282077 DHX16O60231 1041 aaKnown RBP14.04□□□□□ -0.16
PDK1-201ENST00000282077 KIF7Q2M1P5 1343 aa14.04□□□□□ -0.16
PDK1-201ENST00000282077 AAMPQ13685 434 aa14.03□□□□□ -0.16
PDK1-201ENST00000282077 CHMP5Q9NZZ3 219 aa14.03□□□□□ -0.16
PDK1-201ENST00000282077 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.02□□□□□ -0.16
PDK1-201ENST00000282077 CCDC88BA6NC98 1476 aa14.02□□□□□ -0.17
PDK1-201ENST00000282077 R3HCC1Q9Y3T6 440 aaKnown RBP14.02□□□□□ -0.17
PDK1-201ENST00000282077 H0YHG0 523 aa14.02□□□□□ -0.17
PDK1-201ENST00000282077 CWC22Q9HCG8 908 aaKnown RBP14.01□□□□□ -0.17
PDK1-201ENST00000282077 G3BP1Q13283 466 aaKnown RBP eCLIP14.01□□□□□ -0.17
PDK1-201ENST00000282077 CCDC66A2RUB6 948 aa14.01□□□□□ -0.17
PDK1-201ENST00000282077 KIF3BO15066 747 aa14.01□□□□□ -0.17
PDK1-201ENST00000282077 RRP7AQ9Y3A4 280 aaKnown RBP14.01□□□□□ -0.17
PDK1-201ENST00000282077 USP47Q96K76 1375 aa14.01□□□□□ -0.17
PDK1-201ENST00000282077 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
PDK1-201ENST00000282077 FANCIQ9NVI1 1328 aa14.01□□□□□ -0.17
PDK1-201ENST00000282077 MIA2Q96PC5 1412 aa14□□□□□ -0.17
PDK1-201ENST00000282077 DHX8Q14562 1220 aaKnown RBP14□□□□□ -0.17
PDK1-201ENST00000282077 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
PDK1-201ENST00000282077 OFD1O75665 1012 aa14□□□□□ -0.17
PDK1-201ENST00000282077 PSMA5P28066 241 aa13.99□□□□□ -0.17
PDK1-201ENST00000282077 NASPP49321 788 aaPredicted RBP13.99□□□□□ -0.17
PDK1-201ENST00000282077 RALYLQ86SE5 291 aaKnown RBP13.99□□□□□ -0.17
PDK1-201ENST00000282077 SMARCE1Q969G3 411 aa13.99□□□□□ -0.17
PDK1-201ENST00000282077 CRBNQ96SW2 442 aa13.99□□□□□ -0.17
PDK1-201ENST00000282077 VPS37CA5D8V6 355 aaPredicted RBP13.99□□□□□ -0.17
PDK1-201ENST00000282077 PANK3Q9H999 370 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms