RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 FOXD4L5Q5VV16 416 aaPredicted RBP17.86■□□□□ 0.45
VPS26B-201ENST00000281187 FOXD4L4Q8WXT5 416 aaPredicted RBP17.86■□□□□ 0.45
VPS26B-201ENST00000281187 TCOF1Q13428 1488 aaKnown RBP17.86■□□□□ 0.45
VPS26B-201ENST00000281187 TCP11L2Q8N4U5 519 aa17.85■□□□□ 0.45
VPS26B-201ENST00000281187 DNMBPQ6XZF7 1577 aa17.85■□□□□ 0.45
VPS26B-201ENST00000281187 ZKSCAN2Q63HK3 967 aa17.85■□□□□ 0.45
VPS26B-201ENST00000281187 PZPP20742 1482 aa17.84■□□□□ 0.45
VPS26B-201ENST00000281187 JPH4Q96JJ6 628 aa17.84■□□□□ 0.45
VPS26B-201ENST00000281187 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
VPS26B-201ENST00000281187 PLCB2Q00722 1185 aa17.83■□□□□ 0.45
VPS26B-201ENST00000281187 DZIP1LQ8IYY4 767 aaKnown RBP17.83■□□□□ 0.45
VPS26B-201ENST00000281187 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.45
VPS26B-201ENST00000281187 PCDHB15Q9Y5E8 787 aa17.83■□□□□ 0.44
VPS26B-201ENST00000281187 CAMSAP2Q08AD1 1489 aa17.83■□□□□ 0.44
VPS26B-201ENST00000281187 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.44
VPS26B-201ENST00000281187 DMRT2Q9Y5R5 561 aa17.83■□□□□ 0.44
VPS26B-201ENST00000281187 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
VPS26B-201ENST00000281187 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
VPS26B-201ENST00000281187 TSR2Q969E8 191 aaKnown RBP17.82■□□□□ 0.44
VPS26B-201ENST00000281187 CUL7Q14999 1698 aa17.81■□□□□ 0.44
VPS26B-201ENST00000281187 ANKRD45Q5TZF3 282 aa17.81■□□□□ 0.44
VPS26B-201ENST00000281187 TBC1D32Q96NH3 1257 aa17.81■□□□□ 0.44
VPS26B-201ENST00000281187 RRP9O43818 475 aaKnown RBP17.81■□□□□ 0.44
VPS26B-201ENST00000281187 TESK2Q96S53 571 aa17.8■□□□□ 0.44
VPS26B-201ENST00000281187 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
VPS26B-201ENST00000281187 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
VPS26B-201ENST00000281187 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
VPS26B-201ENST00000281187 R3HCC1Q9Y3T6 440 aaKnown RBP17.79■□□□□ 0.44
VPS26B-201ENST00000281187 KIAA1211Q6ZU35 1233 aa17.79■□□□□ 0.44
VPS26B-201ENST00000281187 BCORL1Q5H9F3 1711 aa17.79■□□□□ 0.44
VPS26B-201ENST00000281187 NASPP49321 788 aaPredicted RBP17.79■□□□□ 0.44
VPS26B-201ENST00000281187 TROQ12816 1431 aaPredicted RBP17.79■□□□□ 0.44
VPS26B-201ENST00000281187 CLCN1P35523 988 aa17.78■□□□□ 0.44
VPS26B-201ENST00000281187 NKTRP30414 1462 aaKnown RBP17.78■□□□□ 0.44
VPS26B-201ENST00000281187 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
VPS26B-201ENST00000281187 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
VPS26B-201ENST00000281187 CTTNBP2Q8WZ74 1663 aa17.77■□□□□ 0.44
VPS26B-201ENST00000281187 CC2D2AQ9P2K1 1620 aa17.77■□□□□ 0.43
VPS26B-201ENST00000281187 RLBP1P12271 317 aa17.77■□□□□ 0.43
VPS26B-201ENST00000281187 NUTM2DQ5VT03 806 aaPredicted RBP17.77■□□□□ 0.43
VPS26B-201ENST00000281187 RUNDC1Q96C34 613 aa17.77■□□□□ 0.43
VPS26B-201ENST00000281187 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
VPS26B-201ENST00000281187 DNAJC5BQ9UF47 199 aa17.76■□□□□ 0.43
VPS26B-201ENST00000281187 CFAP70Q5T0N1 1121 aa17.75■□□□□ 0.43
VPS26B-201ENST00000281187 MTHFSP49914 203 aa17.75■□□□□ 0.43
VPS26B-201ENST00000281187 NOL8Q76FK4 1167 aaKnown RBP17.75■□□□□ 0.43
VPS26B-201ENST00000281187 MCTP1Q6DN14 999 aa17.75■□□□□ 0.43
VPS26B-201ENST00000281187 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
VPS26B-201ENST00000281187 GCC2Q8IWJ2 1684 aa17.74■□□□□ 0.43
VPS26B-201ENST00000281187 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
VPS26B-201ENST00000281187 PLEKHH2Q8IVE3 1493 aa17.74■□□□□ 0.43
VPS26B-201ENST00000281187 SKOR2Q2VWA4 1001 aaPredicted RBP17.73■□□□□ 0.43
VPS26B-201ENST00000281187 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
VPS26B-201ENST00000281187 CAVIN1Q6NZI2 390 aaKnown RBP17.73■□□□□ 0.43
VPS26B-201ENST00000281187 EXOSC9Q06265 439 aaKnown RBP17.72■□□□□ 0.43
VPS26B-201ENST00000281187 MPNDQ8N594 471 aa17.72■□□□□ 0.43
VPS26B-201ENST00000281187 TNPO1Q92973 898 aaKnown RBP17.72■□□□□ 0.43
VPS26B-201ENST00000281187 C1orf115Q9H7X2 142 aa17.72■□□□□ 0.43
VPS26B-201ENST00000281187 DDX19BQ9UMR2 479 aa17.71■□□□□ 0.43
VPS26B-201ENST00000281187 PLB1Q6P1J6 1458 aa17.71■□□□□ 0.43
VPS26B-201ENST00000281187 MVPQ14764 893 aaKnown RBP17.71■□□□□ 0.43
VPS26B-201ENST00000281187 IQGAP2Q13576 1575 aa17.71■□□□□ 0.43
VPS26B-201ENST00000281187 RNF214Q8ND24 703 aa17.71■□□□□ 0.43
VPS26B-201ENST00000281187 SLC12A5Q9H2X9 1139 aa17.71■□□□□ 0.43
VPS26B-201ENST00000281187 STK26Q9P289 416 aa17.7■□□□□ 0.42
VPS26B-201ENST00000281187 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
VPS26B-201ENST00000281187 URB2Q14146 1524 aaKnown RBP17.69■□□□□ 0.42
VPS26B-201ENST00000281187 KIAA0586Q9BVV6 1533 aa17.69■□□□□ 0.42
VPS26B-201ENST00000281187 USP19O94966 1318 aa17.69■□□□□ 0.42
VPS26B-201ENST00000281187 KIF3BO15066 747 aa17.69■□□□□ 0.42
VPS26B-201ENST00000281187 KDM5CP41229 1560 aa17.69■□□□□ 0.42
VPS26B-201ENST00000281187 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
VPS26B-201ENST00000281187 BLMP54132 1417 aaPredicted RBP17.67■□□□□ 0.42
VPS26B-201ENST00000281187 PRAG1Q86YV5 1406 aa17.67■□□□□ 0.42
VPS26B-201ENST00000281187 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
VPS26B-201ENST00000281187 RSPH4AQ5TD94 716 aa17.67■□□□□ 0.42
VPS26B-201ENST00000281187 NOB1Q9ULX3 412 aaKnown RBP17.67■□□□□ 0.42
VPS26B-201ENST00000281187 KIF14Q15058 1648 aa17.66■□□□□ 0.42
VPS26B-201ENST00000281187 TPM2P07951 284 aa17.66■□□□□ 0.42
VPS26B-201ENST00000281187 PTMSP20962 102 aa17.66■□□□□ 0.42
VPS26B-201ENST00000281187 ZMYM4Q5VZL5 1548 aa17.66■□□□□ 0.42
VPS26B-201ENST00000281187 SSFA2P28290 1259 aa17.66■□□□□ 0.42
VPS26B-201ENST00000281187 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.66■□□□□ 0.42
VPS26B-201ENST00000281187 NGEFQ8N5V2 710 aa17.66■□□□□ 0.42
VPS26B-201ENST00000281187 UHRF1BP1Q6BDS2 1440 aa17.65■□□□□ 0.42
VPS26B-201ENST00000281187 A0A0U1RQG5 324 aaPredicted RBP17.65■□□□□ 0.42
VPS26B-201ENST00000281187 CASC1Q6TDU7 716 aa17.65■□□□□ 0.42
VPS26B-201ENST00000281187 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
VPS26B-201ENST00000281187 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.41
VPS26B-201ENST00000281187 RIPK4P57078 832 aa17.63■□□□□ 0.41
VPS26B-201ENST00000281187 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
VPS26B-201ENST00000281187 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
VPS26B-201ENST00000281187 RBM42Q9BTD8 480 aaKnown RBP17.63■□□□□ 0.41
VPS26B-201ENST00000281187 NUP153P49790 1475 aaKnown RBP17.63■□□□□ 0.41
VPS26B-201ENST00000281187 PRPF40AO75400 957 aaKnown RBP17.62■□□□□ 0.41
VPS26B-201ENST00000281187 TMEM57Q8N5G2 664 aa17.62■□□□□ 0.41
VPS26B-201ENST00000281187 DNMT1P26358 1616 aaKnown RBP17.62■□□□□ 0.41
VPS26B-201ENST00000281187 ZSCAN30Q86W11 494 aa17.62■□□□□ 0.41
VPS26B-201ENST00000281187 SAMD9Q5K651 1589 aa17.62■□□□□ 0.41
VPS26B-201ENST00000281187 SSH1Q8WYL5 1049 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms