RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.19■□□□□ 0.02
SCLT1-201ENST00000281142 ABCC3O15438 1527 aa15.18■□□□□ 0.02
SCLT1-201ENST00000281142 KANK1Q14678 1352 aa15.18■□□□□ 0.02
SCLT1-201ENST00000281142 USP47Q96K76 1375 aa15.18■□□□□ 0.02
SCLT1-201ENST00000281142 ZC3H13Q5T200 1668 aaKnown RBP15.18■□□□□ 0.02
SCLT1-201ENST00000281142 TET3O43151 1660 aa15.17■□□□□ 0.02
SCLT1-201ENST00000281142 CLTCQ00610 1675 aaKnown RBP15.17■□□□□ 0.02
SCLT1-201ENST00000281142 E9PCH4 1651 aa15.17■□□□□ 0.02
SCLT1-201ENST00000281142 TMC1Q8TDI8 760 aa15.17■□□□□ 0.02
SCLT1-201ENST00000281142 SKAP1Q86WV1 359 aa15.17■□□□□ 0.02
SCLT1-201ENST00000281142 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
SCLT1-201ENST00000281142 LMTK2Q8IWU2 1503 aa15.16■□□□□ 0.02
SCLT1-201ENST00000281142 WASHC2CQ9Y4E1 1318 aa15.16■□□□□ 0.02
SCLT1-201ENST00000281142 UBE2Q2Q8WVN8 375 aa15.15■□□□□ 0.02
SCLT1-201ENST00000281142 PKD2Q13563 968 aa15.15■□□□□ 0.02
SCLT1-201ENST00000281142 EFCAB6Q5THR3 1501 aa15.15■□□□□ 0.02
SCLT1-201ENST00000281142 FER1L4A9Z1Z3 1794 aa15.14■□□□□ 0.01
SCLT1-201ENST00000281142 RRP1P56182 461 aaKnown RBP15.13■□□□□ 0.01
SCLT1-201ENST00000281142 CFAP65Q6ZU64 1925 aaKnown RBP15.13■□□□□ 0.01
SCLT1-201ENST00000281142 NEFMP07197 916 aa15.12■□□□□ 0.01
SCLT1-201ENST00000281142 PDE4AP27815 886 aa15.12■□□□□ 0.01
SCLT1-201ENST00000281142 ADAMTSL3P82987 1691 aa15.11■□□□□ 0.01
SCLT1-201ENST00000281142 MADDQ8WXG6 1647 aa15.11■□□□□ 0.01
SCLT1-201ENST00000281142 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
SCLT1-201ENST00000281142 NPATQ14207 1427 aa15.1■□□□□ 0.01
SCLT1-201ENST00000281142 SPHKAPQ2M3C7 1700 aa15.09■□□□□ 0.01
SCLT1-201ENST00000281142 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
SCLT1-201ENST00000281142 RIMS1Q86UR5 1692 aaKnown RBP15.08■□□□□ 0
SCLT1-201ENST00000281142 RCAN3Q9UKA8 241 aa15.08■□□□□ 0
SCLT1-201ENST00000281142 PLIN1O60240 522 aa15.07■□□□□ 0
SCLT1-201ENST00000281142 BACH2Q9BYV9 841 aa15.07■□□□□ 0
SCLT1-201ENST00000281142 ESF1Q9H501 851 aaKnown RBP15.07■□□□□ 0
SCLT1-201ENST00000281142 PLA2R1Q13018 1463 aa15.07■□□□□ 0
SCLT1-201ENST00000281142 ARHGAP31Q2M1Z3 1444 aa15.07■□□□□ 0
SCLT1-201ENST00000281142 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
SCLT1-201ENST00000281142 LRPPRCP42704 1394 aaKnown RBP15.07■□□□□ 0
SCLT1-201ENST00000281142 C3P01024 1663 aa15.07■□□□□ 0
SCLT1-201ENST00000281142 PREX1Q8TCU6 1659 aa15.06■□□□□ 0
SCLT1-201ENST00000281142 ZMYM3Q14202 1370 aa15.06■□□□□ 0
SCLT1-201ENST00000281142 TCERG1O14776 1098 aaKnown RBP15.06■□□□□ 0
SCLT1-201ENST00000281142 KDM2AQ9Y2K7 1162 aa15.05■□□□□ 0
SCLT1-201ENST00000281142 ST20-MTHFSA0A0A6YYL1 179 aa15.05■□□□□ -0
SCLT1-201ENST00000281142 CARD11Q9BXL7 1154 aa15.05■□□□□ -0
SCLT1-201ENST00000281142 PTPRTO14522 1441 aa15.04■□□□□ -0
SCLT1-201ENST00000281142 FBXO31Q5XUX0 539 aaPredicted RBP15.03■□□□□ -0
SCLT1-201ENST00000281142 TRPM2O94759 1503 aa15.03■□□□□ -0
SCLT1-201ENST00000281142 SYNMO15061 1565 aa15.03■□□□□ -0
SCLT1-201ENST00000281142 UGGT1Q9NYU2 1555 aa15.03■□□□□ -0
SCLT1-201ENST00000281142 MYBBP1AQ9BQG0 1328 aaKnown RBP15.03■□□□□ -0
SCLT1-201ENST00000281142 SLC4A3P48751 1232 aa15.02■□□□□ -0
SCLT1-201ENST00000281142 CEBPAP49715 358 aaPredicted RBP15.02■□□□□ -0
SCLT1-201ENST00000281142 NOS1P29475 1434 aa15.02□□□□□ -0.01
SCLT1-201ENST00000281142 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
SCLT1-201ENST00000281142 ERVK-7P63135 1459 aa15.01□□□□□ -0.01
SCLT1-201ENST00000281142 SPATA31D1Q6ZQQ2 1576 aa15.01□□□□□ -0.01
SCLT1-201ENST00000281142 BRD4O60885 1362 aaPredicted RBP15□□□□□ -0.01
SCLT1-201ENST00000281142 BRPF3Q9ULD4 1205 aa15□□□□□ -0.01
SCLT1-201ENST00000281142 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
SCLT1-201ENST00000281142 CCDC144AA2RUR9 1427 aa14.99□□□□□ -0.01
SCLT1-201ENST00000281142 PIK3C2BO00750 1634 aa14.99□□□□□ -0.01
SCLT1-201ENST00000281142 CRBNQ96SW2 442 aa14.98□□□□□ -0.01
SCLT1-201ENST00000281142 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
SCLT1-201ENST00000281142 KDM4FA0A1W2PPD8 638 aa14.97□□□□□ -0.01
SCLT1-201ENST00000281142 PTPRMP28827 1452 aa14.97□□□□□ -0.01
SCLT1-201ENST00000281142 RALGAPBQ86X10 1494 aa14.97□□□□□ -0.01
SCLT1-201ENST00000281142 MS4A1P11836 297 aa14.96□□□□□ -0.01
SCLT1-201ENST00000281142 RALBP1Q15311 655 aa14.96□□□□□ -0.01
SCLT1-201ENST00000281142 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.02
SCLT1-201ENST00000281142 USP35Q9P2H5 1018 aa14.96□□□□□ -0.02
SCLT1-201ENST00000281142 KIF1BO60333 1816 aa14.95□□□□□ -0.02
SCLT1-201ENST00000281142 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
SCLT1-201ENST00000281142 PPM1GO15355 546 aaPredicted RBP14.94□□□□□ -0.02
SCLT1-201ENST00000281142 MYO5BQ9ULV0 1848 aa14.94□□□□□ -0.02
SCLT1-201ENST00000281142 UHRF1BP1Q6BDS2 1440 aa14.93□□□□□ -0.02
SCLT1-201ENST00000281142 IDI1Q13907 227 aa14.93□□□□□ -0.02
SCLT1-201ENST00000281142 TNRQ92752 1358 aa14.93□□□□□ -0.02
SCLT1-201ENST00000281142 CC2D1BQ5T0F9 858 aaKnown RBP14.93□□□□□ -0.02
SCLT1-201ENST00000281142 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
SCLT1-201ENST00000281142 NFKBIBQ15653 356 aa14.92□□□□□ -0.02
SCLT1-201ENST00000281142 MYO3AQ8NEV4 1616 aa14.91□□□□□ -0.02
SCLT1-201ENST00000281142 TMEM131LA2VDJ0 1609 aa14.91□□□□□ -0.02
SCLT1-201ENST00000281142 SLC52A1Q9NWF4 448 aa14.91□□□□□ -0.02
SCLT1-201ENST00000281142 ADGRB3O60242 1522 aa14.9□□□□□ -0.02
SCLT1-201ENST00000281142 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
SCLT1-201ENST00000281142 KTN1Q86UP2 1357 aaKnown RBP14.9□□□□□ -0.02
SCLT1-201ENST00000281142 EIF5BO60841 1220 aaKnown RBP14.89□□□□□ -0.03
SCLT1-201ENST00000281142 GSE1Q14687 1217 aa14.89□□□□□ -0.03
SCLT1-201ENST00000281142 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
SCLT1-201ENST00000281142 PDE3BQ13370 1112 aa14.89□□□□□ -0.03
SCLT1-201ENST00000281142 RGL3Q3MIN7 710 aa14.89□□□□□ -0.03
SCLT1-201ENST00000281142 UBR1Q8IWV7 1749 aa14.88□□□□□ -0.03
SCLT1-201ENST00000281142 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
SCLT1-201ENST00000281142 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
SCLT1-201ENST00000281142 NBPF1Q3BBV0 1214 aa14.88□□□□□ -0.03
SCLT1-201ENST00000281142 NEURL4Q96JN8 1562 aa14.88□□□□□ -0.03
SCLT1-201ENST00000281142 NLRP1Q9C000 1473 aa14.87□□□□□ -0.03
SCLT1-201ENST00000281142 SETD1BQ9UPS6 1966 aaKnown RBP14.86□□□□□ -0.03
SCLT1-201ENST00000281142 IFT172Q9UG01 1749 aa14.86□□□□□ -0.03
SCLT1-201ENST00000281142 DDRGK1Q96HY6 314 aa14.86□□□□□ -0.03
SCLT1-201ENST00000281142 KDM5AP29375 1690 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms