RNA–Protein interactions for RNA: ENST00000278193.6

LIN7C-201, Transcript of lin-7 homolog C, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7C, Length 4,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7C-201ENST00000278193 HSP90AA2PQ14568 343 aaPredicted RBP8.2□□□□□ -1.1
LIN7C-201ENST00000278193 POM121Q96HA1 1249 aa8.2□□□□□ -1.1
LIN7C-201ENST00000278193 IRX3P78415 501 aaPredicted RBP8.19□□□□□ -1.1
LIN7C-201ENST00000278193 NAALADL2Q58DX5 795 aa8.19□□□□□ -1.1
LIN7C-201ENST00000278193 TSHZ1Q6ZSZ6 1077 aa8.19□□□□□ -1.1
LIN7C-201ENST00000278193 ZC3H6P61129 1189 aaKnown RBP8.19□□□□□ -1.1
LIN7C-201ENST00000278193 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
LIN7C-201ENST00000278193 GABBR1Q9UBS5 961 aa8.19□□□□□ -1.1
LIN7C-201ENST00000278193 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
LIN7C-201ENST00000278193 NAP1L4Q99733 375 aaKnown RBP8.18□□□□□ -1.1
LIN7C-201ENST00000278193 MCCD1P59942 119 aaPredicted RBP8.17□□□□□ -1.1
LIN7C-201ENST00000278193 GIPC2Q8TF65 315 aa8.17□□□□□ -1.1
LIN7C-201ENST00000278193 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
LIN7C-201ENST00000278193 MYBPC2Q14324 1141 aa8.17□□□□□ -1.1
LIN7C-201ENST00000278193 RSF1Q96T23 1441 aaPredicted RBP8.17□□□□□ -1.1
LIN7C-201ENST00000278193 DHX16O60231 1041 aaKnown RBP8.17□□□□□ -1.1
LIN7C-201ENST00000278193 G3BP2Q9UN86 482 aaKnown RBP8.17□□□□□ -1.1
LIN7C-201ENST00000278193 BIRC2Q13490 618 aa8.17□□□□□ -1.1
LIN7C-201ENST00000278193 MCM6Q14566 821 aa8.17□□□□□ -1.1
LIN7C-201ENST00000278193 DPH6Q7L8W6 267 aa8.17□□□□□ -1.1
LIN7C-201ENST00000278193 TRIM34Q9BYJ4 488 aa8.17□□□□□ -1.1
LIN7C-201ENST00000278193 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
LIN7C-201ENST00000278193 SMC5Q8IY18 1101 aa8.16□□□□□ -1.1
LIN7C-201ENST00000278193 SSR1P43307 286 aaKnown RBP8.16□□□□□ -1.1
LIN7C-201ENST00000278193 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
LIN7C-201ENST00000278193 L1TD1Q5T7N2 865 aaKnown RBP8.16□□□□□ -1.1
LIN7C-201ENST00000278193 NBPF11Q86T75 865 aa8.16□□□□□ -1.1
LIN7C-201ENST00000278193 TTLL12Q14166 644 aaPredicted RBP8.15□□□□□ -1.1
LIN7C-201ENST00000278193 NBPF1Q3BBV0 1214 aa8.15□□□□□ -1.1
LIN7C-201ENST00000278193 CCDC146Q8IYE0 955 aa8.15□□□□□ -1.1
LIN7C-201ENST00000278193 COMMD10Q9Y6G5 202 aa8.15□□□□□ -1.1
LIN7C-201ENST00000278193 ZNF280DQ6N043 979 aa8.15□□□□□ -1.1
LIN7C-201ENST00000278193 ESF1Q9H501 851 aaKnown RBP8.15□□□□□ -1.1
LIN7C-201ENST00000278193 ISY1Q9ULR0 285 aaKnown RBP8.15□□□□□ -1.1
LIN7C-201ENST00000278193 E2F4Q16254 413 aa8.15□□□□□ -1.11
LIN7C-201ENST00000278193 PLSCR2Q9NRY7 297 aa8.14□□□□□ -1.11
LIN7C-201ENST00000278193 KIAA1522Q9P206 1035 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-201ENST00000278193 ZBTB47Q9UFB7 747 aaPredicted RBP8.14□□□□□ -1.11
LIN7C-201ENST00000278193 NME8Q8N427 588 aa8.14□□□□□ -1.11
LIN7C-201ENST00000278193 RBM47A0AV96 593 aaKnown RBP8.14□□□□□ -1.11
LIN7C-201ENST00000278193 SKIV2LQ15477 1246 aaKnown RBP8.14□□□□□ -1.11
LIN7C-201ENST00000278193 TCEAL9Q9UHQ7 104 aa8.14□□□□□ -1.11
LIN7C-201ENST00000278193 ZNF500O60304 480 aaPredicted RBP8.13□□□□□ -1.11
LIN7C-201ENST00000278193 SAFB2Q14151 953 aaKnown RBP eCLIP8.13□□□□□ -1.11
LIN7C-201ENST00000278193 TANGO6Q9C0B7 1094 aa8.13□□□□□ -1.11
LIN7C-201ENST00000278193 GET4Q7L5D6 327 aaPredicted RBP8.13□□□□□ -1.11
LIN7C-201ENST00000278193 ENOX2Q16206 610 aaKnown RBP8.13□□□□□ -1.11
LIN7C-201ENST00000278193 NPHP1O15259 732 aa8.12□□□□□ -1.11
LIN7C-201ENST00000278193 PROM2Q8N271 834 aa8.12□□□□□ -1.11
LIN7C-201ENST00000278193 ARIH1Q9Y4X5 557 aaPredicted RBP8.12□□□□□ -1.11
LIN7C-201ENST00000278193 ATAD2BQ9ULI0 1458 aa8.12□□□□□ -1.11
LIN7C-201ENST00000278193 PTPROQ16827 1216 aa8.12□□□□□ -1.11
LIN7C-201ENST00000278193 ZKSCAN2Q63HK3 967 aa8.12□□□□□ -1.11
LIN7C-201ENST00000278193 RRP9O43818 475 aaKnown RBP8.12□□□□□ -1.11
LIN7C-201ENST00000278193 PMM1Q92871 262 aa8.11□□□□□ -1.11
LIN7C-201ENST00000278193 ZCRB1Q8TBF4 217 aaKnown RBP8.11□□□□□ -1.11
LIN7C-201ENST00000278193 EIF4G1Q04637 1599 aaKnown RBP8.11□□□□□ -1.11
LIN7C-201ENST00000278193 CHPF2Q9P2E5 772 aa8.11□□□□□ -1.11
LIN7C-201ENST00000278193 EPB41L2O43491 1005 aaKnown RBP8.1□□□□□ -1.11
LIN7C-201ENST00000278193 CDCA7Q9BWT1 371 aaPredicted RBP8.1□□□□□ -1.11
LIN7C-201ENST00000278193 EIF3JO75822 258 aaKnown RBP8.1□□□□□ -1.11
LIN7C-201ENST00000278193 CDCA8Q53HL2 280 aa8.1□□□□□ -1.11
LIN7C-201ENST00000278193 ERCC5P28715 1186 aaPredicted RBP8.1□□□□□ -1.11
LIN7C-201ENST00000278193 CEP120Q8N960 986 aa8.1□□□□□ -1.11
LIN7C-201ENST00000278193 ZNF219Q9P2Y4 722 aaPredicted RBP8.1□□□□□ -1.11
LIN7C-201ENST00000278193 CHMP3Q9Y3E7 222 aa8.1□□□□□ -1.11
LIN7C-201ENST00000278193 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
LIN7C-201ENST00000278193 PMFBP1Q8TBY8 1022 aa8.09□□□□□ -1.11
LIN7C-201ENST00000278193 VRTNQ9H8Y1 702 aa8.09□□□□□ -1.11
LIN7C-201ENST00000278193 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.09□□□□□ -1.11
LIN7C-201ENST00000278193 HOXA2O43364 376 aa8.09□□□□□ -1.11
LIN7C-201ENST00000278193 PPFIA4O75335 1185 aa8.09□□□□□ -1.11
LIN7C-201ENST00000278193 FBXO9Q9UK97 447 aaPredicted RBP8.09□□□□□ -1.11
LIN7C-201ENST00000278193 CEP164Q9UPV0 1460 aa8.09□□□□□ -1.11
LIN7C-201ENST00000278193 SBNO2Q9Y2G9 1366 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 RNF187Q5TA31 235 aaPredicted RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 USTQ9Y2C2 406 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 CCDC194A0A1B0GVG4 234 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 PARNO95453 639 aaKnown RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 ANP32AP39687 249 aaKnown RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 ZRSR2Q15696 482 aaKnown RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 CADPS2Q86UW7 1296 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 PRPF38AQ8NAV1 312 aaKnown RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 RBM46Q8TBY0 533 aaKnown RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 EVI5LQ96CN4 794 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 ZHX3Q9H4I2 956 aa8.08□□□□□ -1.12
LIN7C-201ENST00000278193 BIN2Q9UBW5 565 aaPredicted RBP8.08□□□□□ -1.12
LIN7C-201ENST00000278193 ZNF16P17020 682 aaPredicted RBP8.07□□□□□ -1.12
LIN7C-201ENST00000278193 AMOTL1Q8IY63 956 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 PBXIP1Q96AQ6 731 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 TPX2Q9ULW0 747 aaKnown RBP8.07□□□□□ -1.12
LIN7C-201ENST00000278193 NCAPD3P42695 1498 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 GOLGA6CA6NDK9 693 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 GOLGA6BA6NDN3 693 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 GOLGA6DP0CG33 693 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 COPB2P35606 906 aa8.07□□□□□ -1.12
LIN7C-201ENST00000278193 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms