RNA–Protein interactions for RNA: ENST00000276014.11

CCNB3-201, Transcript of cyclin B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNB3, Length 4,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-201ENST00000276014 PREX2Q70Z35 1606 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 ITSN2Q9NZM3 1697 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
CCNB3-201ENST00000276014 NOP58Q9Y2X3 529 aaKnown RBP6.95□□□□□ -1.3
CCNB3-201ENST00000276014 TSPOAP1O95153 1857 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 ARAP3Q8WWN8 1544 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 ABCC10Q5T3U5 1492 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 KIF14Q15058 1648 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 ABCA9Q8IUA7 1624 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 U2SURPO15042 1029 aaKnown RBP6.95□□□□□ -1.3
CCNB3-201ENST00000276014 TMEM132EQ6IEE7 984 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 TERF2IPQ9NYB0 399 aa6.95□□□□□ -1.3
CCNB3-201ENST00000276014 CDK13Q14004 1512 aaKnown RBP6.94□□□□□ -1.3
CCNB3-201ENST00000276014 KANK4Q5T7N3 995 aaPredicted RBP6.94□□□□□ -1.3
CCNB3-201ENST00000276014 TRPC5Q9UL62 973 aaPredicted RBP6.94□□□□□ -1.3
CCNB3-201ENST00000276014 CFAP53Q96M91 514 aa6.94□□□□□ -1.3
CCNB3-201ENST00000276014 CDC42BPBQ9Y5S2 1711 aa6.94□□□□□ -1.3
CCNB3-201ENST00000276014 ERICH6BQ5W0A0 696 aa6.94□□□□□ -1.3
CCNB3-201ENST00000276014 ATP10BO94823 1461 aa6.94□□□□□ -1.3
CCNB3-201ENST00000276014 NLRP13Q86W25 1043 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 SIN3AQ96ST3 1273 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 TCOF1Q13428 1488 aaKnown RBP6.93□□□□□ -1.3
CCNB3-201ENST00000276014 APBA3O96018 575 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
CCNB3-201ENST00000276014 GOLGA2Q08379 1002 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 STK32BQ9NY57 414 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 TIMELESSQ9UNS1 1208 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 MAP3K4Q9Y6R4 1608 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 NPHP3Q7Z494 1330 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 LRPPRCP42704 1394 aaKnown RBP6.93□□□□□ -1.3
CCNB3-201ENST00000276014 RAB3GAP2Q9H2M9 1393 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 RRBP1Q9P2E9 1410 aaKnown RBP6.93□□□□□ -1.3
CCNB3-201ENST00000276014 GLI2P10070 1586 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 PLEKHH2Q8IVE3 1493 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 IDI1Q13907 227 aa6.93□□□□□ -1.3
CCNB3-201ENST00000276014 PPRC1Q5VV67 1664 aaKnown RBP6.92□□□□□ -1.3
CCNB3-201ENST00000276014 KRT28Q7Z3Y7 464 aa6.92□□□□□ -1.3
CCNB3-201ENST00000276014 TROQ12816 1431 aaPredicted RBP6.92□□□□□ -1.3
CCNB3-201ENST00000276014 TTC37Q6PGP7 1564 aa6.92□□□□□ -1.3
CCNB3-201ENST00000276014 CANXP27824 592 aaKnown RBP6.92□□□□□ -1.3
CCNB3-201ENST00000276014 RTF1Q92541 710 aaKnown RBP6.92□□□□□ -1.3
CCNB3-201ENST00000276014 KNSTRNQ9Y448 316 aa6.92□□□□□ -1.3
CCNB3-201ENST00000276014 MYO5CQ9NQX4 1742 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 SETD5Q9C0A6 1442 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 CNTLNQ9NXG0 1405 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 SOCS7O14512 581 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 KIF13AQ9H1H9 1805 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 ZNF526Q8TF50 670 aaPredicted RBP6.91□□□□□ -1.3
CCNB3-201ENST00000276014 RBM42Q9BTD8 480 aaKnown RBP6.91□□□□□ -1.3
CCNB3-201ENST00000276014 BEGAINQ9BUH8 593 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 C1orf141Q5JVX7 400 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 PHF8Q9UPP1 1060 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 NUDCQ9Y266 331 aa6.91□□□□□ -1.3
CCNB3-201ENST00000276014 PSDA5PKW4 1024 aaPredicted RBP6.9□□□□□ -1.3
CCNB3-201ENST00000276014 EXOC5O00471 708 aa6.9□□□□□ -1.3
CCNB3-201ENST00000276014 KCNA6P17658 529 aa6.9□□□□□ -1.3
CCNB3-201ENST00000276014 COG3Q96JB2 828 aa6.9□□□□□ -1.3
CCNB3-201ENST00000276014 LAS1LQ9Y4W2 734 aaKnown RBP6.9□□□□□ -1.3
CCNB3-201ENST00000276014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.9□□□□□ -1.3
CCNB3-201ENST00000276014 YEATS2Q9ULM3 1422 aa6.9□□□□□ -1.31
CCNB3-201ENST00000276014 FAM98CQ17RN3 349 aaKnown RBP6.89□□□□□ -1.31
CCNB3-201ENST00000276014 FAM9BQ8IZU0 186 aa6.89□□□□□ -1.31
CCNB3-201ENST00000276014 CHRNA2Q15822 529 aa6.89□□□□□ -1.31
CCNB3-201ENST00000276014 DAXXQ9UER7 740 aaPredicted RBP6.89□□□□□ -1.31
CCNB3-201ENST00000276014 B4GALNT3Q6L9W6 998 aa6.89□□□□□ -1.31
CCNB3-201ENST00000276014 TFCP2L1Q9NZI6 479 aa6.89□□□□□ -1.31
CCNB3-201ENST00000276014 RBM6P78332 1123 aaKnown RBP6.88□□□□□ -1.31
CCNB3-201ENST00000276014 CABLES1Q8TDN4 633 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 CCDC136Q96JN2 1154 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 TTC5Q8N0Z6 440 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 PRAM1Q96QH2 718 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 CLEC11AQ9Y240 323 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 DIP2BQ9P265 1576 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 GCC2Q8IWJ2 1684 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
CCNB3-201ENST00000276014 ARHGEF5Q12774 1597 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 MAST1Q9Y2H9 1570 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 ADGBQ8N7X0 1667 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 ATP10AO60312 1499 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 NCOA2Q15596 1464 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 PTPN23Q9H3S7 1636 aa6.88□□□□□ -1.31
CCNB3-201ENST00000276014 MAPK8IP3Q9UPT6 1336 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 CCDC144AA2RUR9 1427 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCNB3-201ENST00000276014 AFF2P51816 1311 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 MYOM3Q5VTT5 1437 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 TRAPPC8Q9Y2L5 1435 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 TMF1P82094 1093 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 MRS2Q9HD23 443 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 SAMD9LQ8IVG5 1584 aa6.87□□□□□ -1.31
CCNB3-201ENST00000276014 C9orf84Q5VXU9 1444 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 CFAP74Q9C0B2 1584 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 ZNF518AQ6AHZ1 1483 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 DDB1Q16531 1140 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 MORC1Q86VD1 984 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 FBXW7Q969H0 707 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 BCORL1Q5H9F3 1711 aa6.86□□□□□ -1.31
CCNB3-201ENST00000276014 ZNF219Q9P2Y4 722 aaPredicted RBP6.86□□□□□ -1.31
CCNB3-201ENST00000276014 NEUROD2Q15784 382 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms