RNA–Protein interactions for RNA: ENST00000272602.6

CNGA3-201, Transcript of cyclic nucleotide gated channel alpha 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA3, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA3-201ENST00000272602 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.92□□□□□ -0.18
CNGA3-201ENST00000272602 RRAGDQ9NQL2 400 aaPredicted RBP13.92□□□□□ -0.18
CNGA3-201ENST00000272602 MIA2Q96PC5 1412 aa13.92□□□□□ -0.18
CNGA3-201ENST00000272602 L1TD1Q5T7N2 865 aaKnown RBP13.91□□□□□ -0.18
CNGA3-201ENST00000272602 TXNDC2Q86VQ3 553 aa13.91□□□□□ -0.18
CNGA3-201ENST00000272602 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
CNGA3-201ENST00000272602 NUTM2GQ5VZR2 741 aa13.9□□□□□ -0.18
CNGA3-201ENST00000272602 YEATS2Q9ULM3 1422 aa13.9□□□□□ -0.18
CNGA3-201ENST00000272602 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
CNGA3-201ENST00000272602 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNGA3-201ENST00000272602 KTN1Q86UP2 1357 aaKnown RBP13.89□□□□□ -0.19
CNGA3-201ENST00000272602 CCDC141Q6ZP82 1450 aa13.89□□□□□ -0.19
CNGA3-201ENST00000272602 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
CNGA3-201ENST00000272602 ANKRD30BQ9BXX2 1392 aa13.88□□□□□ -0.19
CNGA3-201ENST00000272602 BRD4O60885 1362 aaPredicted RBP13.88□□□□□ -0.19
CNGA3-201ENST00000272602 WAPLQ7Z5K2 1190 aa13.88□□□□□ -0.19
CNGA3-201ENST00000272602 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
CNGA3-201ENST00000272602 DENND4BO75064 1496 aaPredicted RBP13.87□□□□□ -0.19
CNGA3-201ENST00000272602 C8orf34Q49A92 452 aa13.87□□□□□ -0.19
CNGA3-201ENST00000272602 ADGRF5Q8IZF2 1346 aa13.86□□□□□ -0.19
CNGA3-201ENST00000272602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.86□□□□□ -0.19
CNGA3-201ENST00000272602 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
CNGA3-201ENST00000272602 AEBP2Q6ZN18 517 aaPredicted RBP13.86□□□□□ -0.19
CNGA3-201ENST00000272602 CFAP43Q8NDM7 1665 aa13.86□□□□□ -0.19
CNGA3-201ENST00000272602 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
CNGA3-201ENST00000272602 ABCA8O94911 1581 aa13.84□□□□□ -0.19
CNGA3-201ENST00000272602 TTC37Q6PGP7 1564 aa13.84□□□□□ -0.19
CNGA3-201ENST00000272602 EID1Q9Y6B2 187 aa13.84□□□□□ -0.19
CNGA3-201ENST00000272602 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
CNGA3-201ENST00000272602 CCDC146Q8IYE0 955 aa13.83□□□□□ -0.2
CNGA3-201ENST00000272602 PANK2Q9BZ23 570 aa13.83□□□□□ -0.2
CNGA3-201ENST00000272602 RPRD2Q5VT52 1461 aaKnown RBP13.83□□□□□ -0.2
CNGA3-201ENST00000272602 SPATA31E1Q6ZUB1 1445 aa13.83□□□□□ -0.2
CNGA3-201ENST00000272602 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
CNGA3-201ENST00000272602 PMFBP1Q8TBY8 1022 aa13.82□□□□□ -0.2
CNGA3-201ENST00000272602 ADAMTS8Q9UP79 889 aa13.82□□□□□ -0.2
CNGA3-201ENST00000272602 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
CNGA3-201ENST00000272602 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
CNGA3-201ENST00000272602 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
CNGA3-201ENST00000272602 KDM6BO15054 1643 aa13.81□□□□□ -0.2
CNGA3-201ENST00000272602 PANK3Q9H999 370 aa13.81□□□□□ -0.2
CNGA3-201ENST00000272602 FBLN1P23142 703 aa13.8□□□□□ -0.2
CNGA3-201ENST00000272602 ARID3AQ99856 593 aa13.8□□□□□ -0.2
CNGA3-201ENST00000272602 ZCCHC11Q5TAX3 1644 aaKnown RBP13.8□□□□□ -0.2
CNGA3-201ENST00000272602 GOLGA2Q08379 1002 aa13.8□□□□□ -0.2
CNGA3-201ENST00000272602 ADCY10Q96PN6 1610 aa13.8□□□□□ -0.2
CNGA3-201ENST00000272602 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
CNGA3-201ENST00000272602 LRPPRCP42704 1394 aaKnown RBP13.79□□□□□ -0.2
CNGA3-201ENST00000272602 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
CNGA3-201ENST00000272602 SEC24BO95487 1268 aa13.78□□□□□ -0.2
CNGA3-201ENST00000272602 PRAM1Q96QH2 718 aa13.78□□□□□ -0.2
CNGA3-201ENST00000272602 MYH16Q9H6N6 1097 aa13.78□□□□□ -0.2
CNGA3-201ENST00000272602 XRCC6P12956 609 aaKnown RBP eCLIP13.78□□□□□ -0.2
CNGA3-201ENST00000272602 HAP1P54257 671 aaPredicted RBP13.78□□□□□ -0.2
CNGA3-201ENST00000272602 LTV1Q96GA3 475 aaPredicted RBP13.78□□□□□ -0.2
CNGA3-201ENST00000272602 LRRIQ1Q96JM4 1722 aa13.77□□□□□ -0.2
CNGA3-201ENST00000272602 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.2
CNGA3-201ENST00000272602 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.2
CNGA3-201ENST00000272602 BCAR3O75815 825 aa13.77□□□□□ -0.21
CNGA3-201ENST00000272602 TMF1P82094 1093 aa13.77□□□□□ -0.21
CNGA3-201ENST00000272602 COG6Q9Y2V7 657 aa13.77□□□□□ -0.21
CNGA3-201ENST00000272602 SLC12A5Q9H2X9 1139 aa13.77□□□□□ -0.21
CNGA3-201ENST00000272602 ABCC10Q5T3U5 1492 aa13.76□□□□□ -0.21
CNGA3-201ENST00000272602 KIAA1107Q9UPP5 1409 aa13.76□□□□□ -0.21
CNGA3-201ENST00000272602 U2SURPO15042 1029 aaKnown RBP13.75□□□□□ -0.21
CNGA3-201ENST00000272602 TEX14Q8IWB6 1497 aa13.75□□□□□ -0.21
CNGA3-201ENST00000272602 KDM2BQ8NHM5 1336 aa13.75□□□□□ -0.21
CNGA3-201ENST00000272602 ERBINQ96RT1 1412 aa13.74□□□□□ -0.21
CNGA3-201ENST00000272602 PANK1Q8TE04 598 aa13.73□□□□□ -0.21
CNGA3-201ENST00000272602 MBD5Q9P267 1494 aa13.73□□□□□ -0.21
CNGA3-201ENST00000272602 IGHDP01880 384 aa13.73□□□□□ -0.21
CNGA3-201ENST00000272602 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
CNGA3-201ENST00000272602 CLUAP1Q96AJ1 413 aa13.73□□□□□ -0.21
CNGA3-201ENST00000272602 MFAP1P55081 439 aaKnown RBP13.72□□□□□ -0.21
CNGA3-201ENST00000272602 A2MP01023 1474 aa13.72□□□□□ -0.21
CNGA3-201ENST00000272602 APAF1O14727 1248 aa13.72□□□□□ -0.21
CNGA3-201ENST00000272602 RRP9O43818 475 aaKnown RBP13.72□□□□□ -0.21
CNGA3-201ENST00000272602 TRAK2O60296 914 aa13.71□□□□□ -0.21
CNGA3-201ENST00000272602 DUSP27Q5VZP5 1158 aa13.71□□□□□ -0.22
CNGA3-201ENST00000272602 BCL2L13Q9BXK5 485 aa13.71□□□□□ -0.22
CNGA3-201ENST00000272602 GGNBP2Q9H3C7 697 aa13.71□□□□□ -0.22
CNGA3-201ENST00000272602 PIP4K2BP78356 416 aa13.7□□□□□ -0.22
CNGA3-201ENST00000272602 MCM4P33991 863 aa13.69□□□□□ -0.22
CNGA3-201ENST00000272602 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
CNGA3-201ENST00000272602 ROCK1Q13464 1354 aa13.69□□□□□ -0.22
CNGA3-201ENST00000272602 HDGFP51858 240 aaKnown RBP13.69□□□□□ -0.22
CNGA3-201ENST00000272602 TBC1D2Q9BYX2 928 aa13.69□□□□□ -0.22
CNGA3-201ENST00000272602 FOXD4L1Q9NU39 408 aa13.69□□□□□ -0.22
CNGA3-201ENST00000272602 SAMD9LQ8IVG5 1584 aa13.69□□□□□ -0.22
CNGA3-201ENST00000272602 CLCN1P35523 988 aa13.69□□□□□ -0.22
CNGA3-201ENST00000272602 ESPNB1AK53 854 aa13.68□□□□□ -0.22
CNGA3-201ENST00000272602 ZNF518AQ6AHZ1 1483 aa13.68□□□□□ -0.22
CNGA3-201ENST00000272602 ANP32BQ92688 251 aaKnown RBP13.68□□□□□ -0.22
CNGA3-201ENST00000272602 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
CNGA3-201ENST00000272602 BCORL1Q5H9F3 1711 aa13.67□□□□□ -0.22
CNGA3-201ENST00000272602 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
CNGA3-201ENST00000272602 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
CNGA3-201ENST00000272602 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
CNGA3-201ENST00000272602 RBM10P98175 930 aaKnown RBP13.66□□□□□ -0.22
CNGA3-201ENST00000272602 MAPK8IP3Q9UPT6 1336 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms