RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 ZNF521Q96K83 1311 aa25.34■■□□□ 1.65
SCARB1-201ENST00000261693 CDCA8Q53HL2 280 aa25.33■■□□□ 1.64
SCARB1-201ENST00000261693 SHROOM2Q13796 1616 aa25.32■■□□□ 1.64
SCARB1-201ENST00000261693 SCAF11Q99590 1463 aaKnown RBP25.32■■□□□ 1.64
SCARB1-201ENST00000261693 SPAG9O60271 1321 aaKnown RBP25.31■■□□□ 1.64
SCARB1-201ENST00000261693 CENPQQ7L2Z9 268 aaPredicted RBP25.31■■□□□ 1.64
SCARB1-201ENST00000261693 ASXL1Q8IXJ9 1541 aa25.3■■□□□ 1.64
SCARB1-201ENST00000261693 SLC4A3P48751 1232 aa25.3■■□□□ 1.64
SCARB1-201ENST00000261693 SYNMO15061 1565 aa25.29■■□□□ 1.64
SCARB1-201ENST00000261693 ABCC1P33527 1531 aa25.29■■□□□ 1.64
SCARB1-201ENST00000261693 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
SCARB1-201ENST00000261693 SLFN5Q08AF3 891 aa25.29■■□□□ 1.64
SCARB1-201ENST00000261693 SPINK5Q9NQ38 1064 aaPredicted RBP25.29■■□□□ 1.64
SCARB1-201ENST00000261693 DDRGK1Q96HY6 314 aa25.28■■□□□ 1.64
SCARB1-201ENST00000261693 APAF1O14727 1248 aa25.27■■□□□ 1.64
SCARB1-201ENST00000261693 CLTCL1P53675 1640 aa25.27■■□□□ 1.64
SCARB1-201ENST00000261693 TRPM2O94759 1503 aa25.27■■□□□ 1.64
SCARB1-201ENST00000261693 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.26■■□□□ 1.63
SCARB1-201ENST00000261693 CEP152O94986 1710 aa25.26■■□□□ 1.63
SCARB1-201ENST00000261693 PPM1GO15355 546 aaPredicted RBP25.26■■□□□ 1.63
SCARB1-201ENST00000261693 ZCCHC11Q5TAX3 1644 aaKnown RBP25.26■■□□□ 1.63
SCARB1-201ENST00000261693 MYOM1P52179 1685 aa25.25■■□□□ 1.63
SCARB1-201ENST00000261693 RGS3P49796 1198 aa25.25■■□□□ 1.63
SCARB1-201ENST00000261693 PIK3C2GO75747 1445 aa25.24■■□□□ 1.63
SCARB1-201ENST00000261693 USP35Q9P2H5 1018 aa25.24■■□□□ 1.63
SCARB1-201ENST00000261693 SCAPERQ9BY12 1400 aa25.23■■□□□ 1.63
SCARB1-201ENST00000261693 BCAR3O75815 825 aa25.22■■□□□ 1.63
SCARB1-201ENST00000261693 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
SCARB1-201ENST00000261693 PTPRTO14522 1441 aa25.21■■□□□ 1.63
SCARB1-201ENST00000261693 EIF3AQ14152 1382 aaKnown RBP25.2■■□□□ 1.63
SCARB1-201ENST00000261693 FAM161AQ3B820 660 aa25.2■■□□□ 1.63
SCARB1-201ENST00000261693 C8orf34Q49A92 452 aa25.2■■□□□ 1.63
SCARB1-201ENST00000261693 DMRT2Q9Y5R5 561 aa25.19■■□□□ 1.62
SCARB1-201ENST00000261693 TRMT2AQ8IZ69 625 aaKnown RBP25.18■■□□□ 1.62
SCARB1-201ENST00000261693 ZFYVE16Q7Z3T8 1539 aa25.18■■□□□ 1.62
SCARB1-201ENST00000261693 KDM5AP29375 1690 aaKnown RBP25.18■■□□□ 1.62
SCARB1-201ENST00000261693 CLASP1Q7Z460 1538 aa25.18■■□□□ 1.62
SCARB1-201ENST00000261693 DAXXQ9UER7 740 aaPredicted RBP25.17■■□□□ 1.62
SCARB1-201ENST00000261693 KIF3BO15066 747 aa25.17■■□□□ 1.62
SCARB1-201ENST00000261693 CARD14Q9BXL6 1004 aa25.17■■□□□ 1.62
SCARB1-201ENST00000261693 STAC3Q96MF2 364 aa25.16■■□□□ 1.62
SCARB1-201ENST00000261693 IL27Q8NEV9 243 aa25.16■■□□□ 1.62
SCARB1-201ENST00000261693 NPC1L1Q9UHC9 1359 aa25.16■■□□□ 1.62
SCARB1-201ENST00000261693 NKTRP30414 1462 aaKnown RBP25.16■■□□□ 1.62
SCARB1-201ENST00000261693 ADGRF5Q8IZF2 1346 aa25.15■■□□□ 1.62
SCARB1-201ENST00000261693 UGGT1Q9NYU2 1555 aa25.14■■□□□ 1.62
SCARB1-201ENST00000261693 RTEL1-TNFRSF6BF6WH68 1400 aa25.13■■□□□ 1.61
SCARB1-201ENST00000261693 KANK1Q14678 1352 aa25.13■■□□□ 1.61
SCARB1-201ENST00000261693 TET3O43151 1660 aa25.13■■□□□ 1.61
SCARB1-201ENST00000261693 E9PSI1 815 aa25.12■■□□□ 1.61
SCARB1-201ENST00000261693 NFKBIBQ15653 356 aa25.12■■□□□ 1.61
SCARB1-201ENST00000261693 ERVK-7P63135 1459 aa25.12■■□□□ 1.61
SCARB1-201ENST00000261693 DEPDC5O75140 1603 aa25.11■■□□□ 1.61
SCARB1-201ENST00000261693 IGHDP01880 384 aa25.09■■□□□ 1.61
SCARB1-201ENST00000261693 TNNT2P45379 298 aaPredicted RBP25.09■■□□□ 1.61
SCARB1-201ENST00000261693 RTN4Q9NQC3 1192 aaKnown RBP25.08■■□□□ 1.61
SCARB1-201ENST00000261693 ABCA6Q8N139 1617 aa25.07■■□□□ 1.6
SCARB1-201ENST00000261693 NEUROD2Q15784 382 aa25.07■■□□□ 1.6
SCARB1-201ENST00000261693 KIAA1210Q9ULL0 1709 aa25.07■■□□□ 1.6
SCARB1-201ENST00000261693 ATP7AQ04656 1500 aa25.06■■□□□ 1.6
SCARB1-201ENST00000261693 CANXP27824 592 aaKnown RBP25.05■■□□□ 1.6
SCARB1-201ENST00000261693 MAP3K4Q9Y6R4 1608 aa25.05■■□□□ 1.6
SCARB1-201ENST00000261693 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
SCARB1-201ENST00000261693 PANK1Q8TE04 598 aa25.05■■□□□ 1.6
SCARB1-201ENST00000261693 COG6Q9Y2V7 657 aa25.04■■□□□ 1.6
SCARB1-201ENST00000261693 WWC1Q8IX03 1113 aa25.03■■□□□ 1.6
SCARB1-201ENST00000261693 RRP7AQ9Y3A4 280 aaKnown RBP25.03■■□□□ 1.6
SCARB1-201ENST00000261693 CENPJQ9HC77 1338 aaPredicted RBP25.03■■□□□ 1.6
SCARB1-201ENST00000261693 CHGAP10645 457 aaKnown RBP25.02■■□□□ 1.6
SCARB1-201ENST00000261693 FANCAO15360 1455 aa25.02■■□□□ 1.6
SCARB1-201ENST00000261693 VWDEQ8N2E2 1590 aa25.02■■□□□ 1.6
SCARB1-201ENST00000261693 FRAT1Q92837 279 aaPredicted RBP25.01■■□□□ 1.59
SCARB1-201ENST00000261693 GSE1Q14687 1217 aa25.01■■□□□ 1.59
SCARB1-201ENST00000261693 KIF1BO60333 1816 aa25■■□□□ 1.59
SCARB1-201ENST00000261693 SLC24A1O60721 1099 aa24.99■■□□□ 1.59
SCARB1-201ENST00000261693 INO80Q9ULG1 1556 aaPredicted RBP24.99■■□□□ 1.59
SCARB1-201ENST00000261693 TRAK1Q9UPV9 953 aa24.99■■□□□ 1.59
SCARB1-201ENST00000261693 MYOM2P54296 1465 aa24.99■■□□□ 1.59
SCARB1-201ENST00000261693 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
SCARB1-201ENST00000261693 CGNL1Q0VF96 1302 aa24.98■■□□□ 1.59
SCARB1-201ENST00000261693 CLUAP1Q96AJ1 413 aa24.98■■□□□ 1.59
SCARB1-201ENST00000261693 PDE3AQ14432 1141 aa24.97■■□□□ 1.59
SCARB1-201ENST00000261693 SLC12A5Q9H2X9 1139 aa24.97■■□□□ 1.59
SCARB1-201ENST00000261693 ARAP3Q8WWN8 1544 aa24.97■■□□□ 1.59
SCARB1-201ENST00000261693 MROH2AA6NES4 1674 aa24.96■■□□□ 1.59
SCARB1-201ENST00000261693 NSD3Q9BZ95 1437 aa24.96■■□□□ 1.59
SCARB1-201ENST00000261693 CFAP65Q6ZU64 1925 aaKnown RBP24.96■■□□□ 1.59
SCARB1-201ENST00000261693 POLR3AO14802 1390 aaPredicted RBP24.96■■□□□ 1.59
SCARB1-201ENST00000261693 MROH1Q8NDA8 1641 aa24.96■■□□□ 1.59
SCARB1-201ENST00000261693 ADGRL1O94910 1474 aa24.95■■□□□ 1.58
SCARB1-201ENST00000261693 FRAT2O75474 233 aaPredicted RBP24.95■■□□□ 1.58
SCARB1-201ENST00000261693 SEC24BO95487 1268 aa24.94■■□□□ 1.58
SCARB1-201ENST00000261693 NGEFQ8N5V2 710 aa24.94■■□□□ 1.58
SCARB1-201ENST00000261693 NOS1P29475 1434 aa24.94■■□□□ 1.58
SCARB1-201ENST00000261693 BCL2L13Q9BXK5 485 aa24.93■■□□□ 1.58
SCARB1-201ENST00000261693 BRPF3Q9ULD4 1205 aa24.93■■□□□ 1.58
SCARB1-201ENST00000261693 TCP11L2Q8N4U5 519 aa24.92■■□□□ 1.58
SCARB1-201ENST00000261693 IFT172Q9UG01 1749 aa24.92■■□□□ 1.58
SCARB1-201ENST00000261693 TMEM132EQ6IEE7 984 aa24.92■■□□□ 1.58
SCARB1-201ENST00000261693 TNNQ9UQP3 1299 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms