RNA–Protein interactions for RNA: ENST00000261667.7

KPNA3-201, Transcript of karyopherin subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA3, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA3-201ENST00000261667 RRAGDQ9NQL2 400 aaPredicted RBP13.19□□□□□ -0.3
KPNA3-201ENST00000261667 TNNT1P13805 278 aa13.19□□□□□ -0.3
KPNA3-201ENST00000261667 RRP1P56182 461 aaKnown RBP13.19□□□□□ -0.3
KPNA3-201ENST00000261667 PPP4R3BQ5MIZ7 849 aa13.19□□□□□ -0.3
KPNA3-201ENST00000261667 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
KPNA3-201ENST00000261667 ISY1Q9ULR0 285 aaKnown RBP13.19□□□□□ -0.3
KPNA3-201ENST00000261667 KIF3AQ9Y496 699 aa13.19□□□□□ -0.3
KPNA3-201ENST00000261667 FGD6Q6ZV73 1430 aa13.17□□□□□ -0.3
KPNA3-201ENST00000261667 CHMP7Q8WUX9 453 aaPredicted RBP13.17□□□□□ -0.3
KPNA3-201ENST00000261667 PTPN23Q9H3S7 1636 aa13.16□□□□□ -0.3
KPNA3-201ENST00000261667 PHF14O94880 888 aa13.16□□□□□ -0.3
KPNA3-201ENST00000261667 PLB1Q6P1J6 1458 aa13.16□□□□□ -0.3
KPNA3-201ENST00000261667 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
KPNA3-201ENST00000261667 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
KPNA3-201ENST00000261667 PLIN1O60240 522 aa13.15□□□□□ -0.3
KPNA3-201ENST00000261667 GTPBP4Q9BZE4 634 aaKnown RBP13.15□□□□□ -0.3
KPNA3-201ENST00000261667 MYOM3Q5VTT5 1437 aa13.15□□□□□ -0.3
KPNA3-201ENST00000261667 U2SURPO15042 1029 aaKnown RBP13.14□□□□□ -0.31
KPNA3-201ENST00000261667 HSPA5P11021 654 aaKnown RBP13.13□□□□□ -0.31
KPNA3-201ENST00000261667 GTF2A1P52655 376 aaPredicted RBP13.13□□□□□ -0.31
KPNA3-201ENST00000261667 SASS6Q6UVJ0 657 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 DYNC1I1O14576 645 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 CLGNO14967 610 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 JPH4Q96JJ6 628 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 CRBNQ96SW2 442 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
KPNA3-201ENST00000261667 HOMEZQ8IX15 550 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
KPNA3-201ENST00000261667 CARMIL2Q6F5E8 1435 aa13.12□□□□□ -0.31
KPNA3-201ENST00000261667 HSP90AB3PQ58FF7 597 aa13.12□□□□□ -0.31
KPNA3-201ENST00000261667 FOXD4L5Q5VV16 416 aaPredicted RBP13.12□□□□□ -0.31
KPNA3-201ENST00000261667 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
KPNA3-201ENST00000261667 KIF20AO95235 890 aa13.12□□□□□ -0.31
KPNA3-201ENST00000261667 KIF14Q15058 1648 aa13.12□□□□□ -0.31
KPNA3-201ENST00000261667 RDXP35241 583 aaKnown RBP13.12□□□□□ -0.31
KPNA3-201ENST00000261667 PTPRKQ15262 1439 aa13.11□□□□□ -0.31
KPNA3-201ENST00000261667 GCC2Q8IWJ2 1684 aa13.11□□□□□ -0.31
KPNA3-201ENST00000261667 MCM4P33991 863 aa13.11□□□□□ -0.31
KPNA3-201ENST00000261667 IGSF3O75054 1194 aa13.11□□□□□ -0.31
KPNA3-201ENST00000261667 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
KPNA3-201ENST00000261667 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
KPNA3-201ENST00000261667 CDC42BPAQ5VT25 1732 aa13.1□□□□□ -0.31
KPNA3-201ENST00000261667 PRG4Q92954 1404 aaPredicted RBP13.1□□□□□ -0.31
KPNA3-201ENST00000261667 NEUROD2Q15784 382 aa13.1□□□□□ -0.31
KPNA3-201ENST00000261667 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 FAM193AP78312 1265 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 TRIM34Q9BYJ4 488 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 IFT57Q9NWB7 429 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 NOC3LQ8WTT2 800 aaKnown RBP13.09□□□□□ -0.31
KPNA3-201ENST00000261667 ARGLU1Q9NWB6 273 aaPredicted RBP13.09□□□□□ -0.31
KPNA3-201ENST00000261667 ITSN2Q9NZM3 1697 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 MIA2Q96PC5 1412 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
KPNA3-201ENST00000261667 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
KPNA3-201ENST00000261667 CROCC2H7BZ55 1655 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 CHIC2Q9UKJ5 165 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
KPNA3-201ENST00000261667 XRCC6P12956 609 aaKnown RBP eCLIP13.08□□□□□ -0.32
KPNA3-201ENST00000261667 KDM2AQ9Y2K7 1162 aa13.08□□□□□ -0.32
KPNA3-201ENST00000261667 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
KPNA3-201ENST00000261667 PPP1R15AO75807 674 aaPredicted RBP13.08□□□□□ -0.32
KPNA3-201ENST00000261667 ATP10BO94823 1461 aa13.08□□□□□ -0.32
KPNA3-201ENST00000261667 MAPKBP1O60336 1514 aa13.08□□□□□ -0.32
KPNA3-201ENST00000261667 MPNDQ8N594 471 aa13.08□□□□□ -0.32
KPNA3-201ENST00000261667 ABCC10Q5T3U5 1492 aa13.08□□□□□ -0.32
KPNA3-201ENST00000261667 H0YHG0 523 aa13.07□□□□□ -0.32
KPNA3-201ENST00000261667 PANK2Q9BZ23 570 aa13.07□□□□□ -0.32
KPNA3-201ENST00000261667 LMOD3Q0VAK6 560 aa13.07□□□□□ -0.32
KPNA3-201ENST00000261667 CCDC94Q9BW85 323 aaPredicted RBP13.07□□□□□ -0.32
KPNA3-201ENST00000261667 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
KPNA3-201ENST00000261667 DNMT1P26358 1616 aaKnown RBP13.07□□□□□ -0.32
KPNA3-201ENST00000261667 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
KPNA3-201ENST00000261667 LEKR1Q6ZMV7 388 aa13.07□□□□□ -0.32
KPNA3-201ENST00000261667 TROQ12816 1431 aaPredicted RBP13.06□□□□□ -0.32
KPNA3-201ENST00000261667 CAVIN1Q6NZI2 390 aaKnown RBP13.06□□□□□ -0.32
KPNA3-201ENST00000261667 PDE3BQ13370 1112 aa13.06□□□□□ -0.32
KPNA3-201ENST00000261667 NPHP1O15259 732 aa13.05□□□□□ -0.32
KPNA3-201ENST00000261667 HDAC5Q9UQL6 1122 aa13.05□□□□□ -0.32
KPNA3-201ENST00000261667 PMFBP1Q8TBY8 1022 aa13.05□□□□□ -0.32
KPNA3-201ENST00000261667 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
KPNA3-201ENST00000261667 KIF16BQ96L93 1317 aa13.04□□□□□ -0.32
KPNA3-201ENST00000261667 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
KPNA3-201ENST00000261667 ABCC2Q92887 1545 aa13.04□□□□□ -0.32
KPNA3-201ENST00000261667 RRP7BPQ9NSQ0 103 aa13.04□□□□□ -0.32
KPNA3-201ENST00000261667 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
KPNA3-201ENST00000261667 PLPPR3Q6T4P5 718 aa13.04□□□□□ -0.32
KPNA3-201ENST00000261667 FOXD4L6Q3SYB3 417 aaPredicted RBP13.03□□□□□ -0.32
KPNA3-201ENST00000261667 FOXD4L3Q6VB84 417 aaPredicted RBP13.03□□□□□ -0.32
KPNA3-201ENST00000261667 PRKRIP1Q9H875 184 aaPredicted RBP13.03□□□□□ -0.32
KPNA3-201ENST00000261667 AXDND1Q5T1B0 1012 aaPredicted RBP13.03□□□□□ -0.32
KPNA3-201ENST00000261667 CERS3Q8IU89 383 aa13.03□□□□□ -0.32
KPNA3-201ENST00000261667 HFM1A2PYH4 1435 aa13.03□□□□□ -0.32
KPNA3-201ENST00000261667 AK7Q96M32 723 aa13.03□□□□□ -0.32
KPNA3-201ENST00000261667 TOMM22Q9NS69 142 aa13.03□□□□□ -0.32
KPNA3-201ENST00000261667 DCAF11Q8TEB1 546 aa13.03□□□□□ -0.32
KPNA3-201ENST00000261667 ZFP91Q96JP5 570 aaPredicted RBP13.03□□□□□ -0.32
KPNA3-201ENST00000261667 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.32
KPNA3-201ENST00000261667 CDC42BPBQ9Y5S2 1711 aa13.02□□□□□ -0.33
KPNA3-201ENST00000261667 USP8P40818 1118 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms