RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 DDX11L8A8MPP1 907 aa16.86■□□□□ 0.29
TUBGCP4-201ENST00000260383 OFD1O75665 1012 aa16.86■□□□□ 0.29
TUBGCP4-201ENST00000260383 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
TUBGCP4-201ENST00000260383 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
TUBGCP4-201ENST00000260383 PPP2R1AP30153 589 aa16.85■□□□□ 0.29
TUBGCP4-201ENST00000260383 ARID3AQ99856 593 aa16.85■□□□□ 0.29
TUBGCP4-201ENST00000260383 PDZRN3Q9UPQ7 1066 aa16.85■□□□□ 0.29
TUBGCP4-201ENST00000260383 NKTRP30414 1462 aaKnown RBP16.85■□□□□ 0.29
TUBGCP4-201ENST00000260383 TESK2Q96S53 571 aa16.84■□□□□ 0.29
TUBGCP4-201ENST00000260383 PCDHB15Q9Y5E8 787 aa16.84■□□□□ 0.29
TUBGCP4-201ENST00000260383 C22orf23Q9BZE7 217 aa16.83■□□□□ 0.29
TUBGCP4-201ENST00000260383 APAF1O14727 1248 aa16.83■□□□□ 0.28
TUBGCP4-201ENST00000260383 PDE3AQ14432 1141 aa16.83■□□□□ 0.28
TUBGCP4-201ENST00000260383 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
TUBGCP4-201ENST00000260383 RTEL1-TNFRSF6BF6WH68 1400 aa16.83■□□□□ 0.28
TUBGCP4-201ENST00000260383 ZSCAN30Q86W11 494 aa16.83■□□□□ 0.28
TUBGCP4-201ENST00000260383 NUP155O75694 1391 aa16.82■□□□□ 0.28
TUBGCP4-201ENST00000260383 MFAP1P55081 439 aaKnown RBP16.82■□□□□ 0.28
TUBGCP4-201ENST00000260383 COL17A1Q9UMD9 1497 aaPredicted RBP16.82■□□□□ 0.28
TUBGCP4-201ENST00000260383 CANXP27824 592 aaKnown RBP16.82■□□□□ 0.28
TUBGCP4-201ENST00000260383 TNPO1Q92973 898 aaKnown RBP16.82■□□□□ 0.28
TUBGCP4-201ENST00000260383 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
TUBGCP4-201ENST00000260383 FGD1P98174 961 aa16.81■□□□□ 0.28
TUBGCP4-201ENST00000260383 PPP1R9BQ96SB3 815 aa16.8■□□□□ 0.28
TUBGCP4-201ENST00000260383 TNNQ9UQP3 1299 aa16.8■□□□□ 0.28
TUBGCP4-201ENST00000260383 EIF4G3O43432 1585 aaKnown RBP16.8■□□□□ 0.28
TUBGCP4-201ENST00000260383 DDIT3P35638 169 aa16.79■□□□□ 0.28
TUBGCP4-201ENST00000260383 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
TUBGCP4-201ENST00000260383 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP4-201ENST00000260383 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP4-201ENST00000260383 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.79■□□□□ 0.28
TUBGCP4-201ENST00000260383 PRDM10Q9NQV6 1147 aa16.79■□□□□ 0.28
TUBGCP4-201ENST00000260383 MSNP26038 577 aaKnown RBP16.78■□□□□ 0.28
TUBGCP4-201ENST00000260383 RGL3Q3MIN7 710 aa16.78■□□□□ 0.28
TUBGCP4-201ENST00000260383 E9PSI1 815 aa16.77■□□□□ 0.28
TUBGCP4-201ENST00000260383 NASPP49321 788 aaPredicted RBP16.77■□□□□ 0.28
TUBGCP4-201ENST00000260383 ANKRD50Q9ULJ7 1429 aa16.77■□□□□ 0.28
TUBGCP4-201ENST00000260383 HSCBQ8IWL3 235 aa16.77■□□□□ 0.27
TUBGCP4-201ENST00000260383 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.27
TUBGCP4-201ENST00000260383 RLBP1P12271 317 aa16.76■□□□□ 0.27
TUBGCP4-201ENST00000260383 PRAG1Q86YV5 1406 aa16.76■□□□□ 0.27
TUBGCP4-201ENST00000260383 TERF1P54274 439 aa16.76■□□□□ 0.27
TUBGCP4-201ENST00000260383 MAP7D2Q96T17 732 aa16.76■□□□□ 0.27
TUBGCP4-201ENST00000260383 ERBINQ96RT1 1412 aa16.75■□□□□ 0.27
TUBGCP4-201ENST00000260383 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
TUBGCP4-201ENST00000260383 CFDP1Q9UEE9 299 aaPredicted RBP16.75■□□□□ 0.27
TUBGCP4-201ENST00000260383 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
TUBGCP4-201ENST00000260383 TRPM1Q7Z4N2 1603 aa16.75■□□□□ 0.27
TUBGCP4-201ENST00000260383 UQCRHLA0A096LP55 91 aa16.74■□□□□ 0.27
TUBGCP4-201ENST00000260383 UQCRHP07919 91 aa16.74■□□□□ 0.27
TUBGCP4-201ENST00000260383 CEP170Q5SW79 1584 aa16.74■□□□□ 0.27
TUBGCP4-201ENST00000260383 MAGI2Q86UL8 1455 aa16.74■□□□□ 0.27
TUBGCP4-201ENST00000260383 KNSTRNQ9Y448 316 aa16.74■□□□□ 0.27
TUBGCP4-201ENST00000260383 NCOA3Q9Y6Q9 1424 aa16.74■□□□□ 0.27
TUBGCP4-201ENST00000260383 KDM5DQ9BY66 1539 aa16.73■□□□□ 0.27
TUBGCP4-201ENST00000260383 TMF1P82094 1093 aa16.73■□□□□ 0.27
TUBGCP4-201ENST00000260383 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
TUBGCP4-201ENST00000260383 AMER1Q5JTC6 1135 aaPredicted RBP16.73■□□□□ 0.27
TUBGCP4-201ENST00000260383 ZMYM3Q14202 1370 aa16.73■□□□□ 0.27
TUBGCP4-201ENST00000260383 ANKRD30AQ9BXX3 1397 aa16.72■□□□□ 0.27
TUBGCP4-201ENST00000260383 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
TUBGCP4-201ENST00000260383 ADGRL2O95490 1459 aa16.71■□□□□ 0.27
TUBGCP4-201ENST00000260383 RAB3GAP1Q15042 981 aa16.71■□□□□ 0.27
TUBGCP4-201ENST00000260383 SKOR2Q2VWA4 1001 aaPredicted RBP16.71■□□□□ 0.27
TUBGCP4-201ENST00000260383 GBP4Q96PP9 640 aa16.71■□□□□ 0.27
TUBGCP4-201ENST00000260383 FOXD4L1Q9NU39 408 aa16.71■□□□□ 0.27
TUBGCP4-201ENST00000260383 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.71■□□□□ 0.27
TUBGCP4-201ENST00000260383 BCL2L13Q9BXK5 485 aa16.7■□□□□ 0.26
TUBGCP4-201ENST00000260383 GPRASP1Q5JY77 1395 aa16.7■□□□□ 0.26
TUBGCP4-201ENST00000260383 NINLQ9Y2I6 1382 aa16.69■□□□□ 0.26
TUBGCP4-201ENST00000260383 SMC5Q8IY18 1101 aa16.69■□□□□ 0.26
TUBGCP4-201ENST00000260383 RWDD1Q9H446 243 aaPredicted RBP16.69■□□□□ 0.26
TUBGCP4-201ENST00000260383 IQGAP2Q13576 1575 aa16.69■□□□□ 0.26
TUBGCP4-201ENST00000260383 ANP32BQ92688 251 aaKnown RBP16.68■□□□□ 0.26
TUBGCP4-201ENST00000260383 RARSP54136 660 aaKnown RBP16.67■□□□□ 0.26
TUBGCP4-201ENST00000260383 WDR7Q9Y4E6 1490 aa16.67■□□□□ 0.26
TUBGCP4-201ENST00000260383 NOL7Q9UMY1 257 aaKnown RBP16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 ZNF500O60304 480 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 HSP90AB1P08238 724 aaKnown RBP16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 GRIN2AQ12879 1464 aa16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 PRDM15P57071 1507 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 WWC1Q8IX03 1113 aa16.66■□□□□ 0.26
TUBGCP4-201ENST00000260383 PRG4Q92954 1404 aaPredicted RBP16.65■□□□□ 0.26
TUBGCP4-201ENST00000260383 CD2BP2O95400 341 aaKnown RBP16.65■□□□□ 0.26
TUBGCP4-201ENST00000260383 SSFA2P28290 1259 aa16.65■□□□□ 0.26
TUBGCP4-201ENST00000260383 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
TUBGCP4-201ENST00000260383 SNX21Q969T3 373 aa16.65■□□□□ 0.26
TUBGCP4-201ENST00000260383 DYNC1I1O14576 645 aa16.64■□□□□ 0.25
TUBGCP4-201ENST00000260383 DMTNQ08495 405 aa16.64■□□□□ 0.25
TUBGCP4-201ENST00000260383 DDX49Q9Y6V7 483 aaKnown RBP16.64■□□□□ 0.25
TUBGCP4-201ENST00000260383 ZSCAN20P17040 1043 aaPredicted RBP16.64■□□□□ 0.25
TUBGCP4-201ENST00000260383 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
TUBGCP4-201ENST00000260383 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
TUBGCP4-201ENST00000260383 ABCC2Q92887 1545 aa16.63■□□□□ 0.25
TUBGCP4-201ENST00000260383 GPATCH8Q9UKJ3 1502 aaKnown RBP16.63■□□□□ 0.25
TUBGCP4-201ENST00000260383 NUP153P49790 1475 aaKnown RBP16.62■□□□□ 0.25
TUBGCP4-201ENST00000260383 RBM25P49756 843 aaKnown RBP16.62■□□□□ 0.25
TUBGCP4-201ENST00000260383 JARID2Q92833 1246 aaPredicted RBP16.62■□□□□ 0.25
TUBGCP4-201ENST00000260383 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms