RNA–Protein interactions for RNA: ENST00000260270.2

FDX1-201, Transcript of ferredoxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FDX1, Length 3,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDX1-201ENST00000260270 SBNO2Q9Y2G9 1366 aa22.23■■□□□ 1.15
FDX1-201ENST00000260270 DCAF11Q8TEB1 546 aa22.2■■□□□ 1.14
FDX1-201ENST00000260270 PIK3C2GO75747 1445 aa22.19■■□□□ 1.14
FDX1-201ENST00000260270 ASXL1Q8IXJ9 1541 aa22.17■■□□□ 1.14
FDX1-201ENST00000260270 ADGRL1O94910 1474 aa22.17■■□□□ 1.14
FDX1-201ENST00000260270 CAMSAP1Q5T5Y3 1602 aa22.16■■□□□ 1.14
FDX1-201ENST00000260270 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
FDX1-201ENST00000260270 RICTORQ6R327 1708 aa22.15■■□□□ 1.14
FDX1-201ENST00000260270 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
FDX1-201ENST00000260270 NLRP13Q86W25 1043 aa22.15■■□□□ 1.14
FDX1-201ENST00000260270 SIGLEC1Q9BZZ2 1709 aa22.14■■□□□ 1.13
FDX1-201ENST00000260270 SHPRHQ149N8 1683 aa22.12■■□□□ 1.13
FDX1-201ENST00000260270 POGZQ7Z3K3 1410 aa22.12■■□□□ 1.13
FDX1-201ENST00000260270 NBR1Q14596 966 aa22.12■■□□□ 1.13
FDX1-201ENST00000260270 ASXL2Q76L83 1435 aa22.12■■□□□ 1.13
FDX1-201ENST00000260270 FAM9BQ8IZU0 186 aa22.1■■□□□ 1.13
FDX1-201ENST00000260270 ERVK-7P63135 1459 aa22.1■■□□□ 1.13
FDX1-201ENST00000260270 DEKP35659 375 aaKnown RBP22.1■■□□□ 1.13
FDX1-201ENST00000260270 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
FDX1-201ENST00000260270 QRICH2Q9H0J4 1663 aa22.09■■□□□ 1.13
FDX1-201ENST00000260270 GLI2P10070 1586 aa22.08■■□□□ 1.13
FDX1-201ENST00000260270 ARHGEF28Q8N1W1 1705 aaKnown RBP22.08■■□□□ 1.12
FDX1-201ENST00000260270 NEO1Q92859 1461 aa22.08■■□□□ 1.12
FDX1-201ENST00000260270 ABCC3O15438 1527 aa22.07■■□□□ 1.12
FDX1-201ENST00000260270 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
FDX1-201ENST00000260270 ANO8Q9HCE9 1232 aaPredicted RBP22.07■■□□□ 1.12
FDX1-201ENST00000260270 CLTCQ00610 1675 aaKnown RBP22.07■■□□□ 1.12
FDX1-201ENST00000260270 REREQ9P2R6 1566 aa22.06■■□□□ 1.12
FDX1-201ENST00000260270 DIP2CQ9Y2E4 1556 aa22.04■■□□□ 1.12
FDX1-201ENST00000260270 ARHGAP31Q2M1Z3 1444 aa22.04■■□□□ 1.12
FDX1-201ENST00000260270 NOS1P29475 1434 aa22.02■■□□□ 1.12
FDX1-201ENST00000260270 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
FDX1-201ENST00000260270 EIF3AQ14152 1382 aaKnown RBP22.02■■□□□ 1.12
FDX1-201ENST00000260270 ANKRD26Q9UPS8 1709 aa22.02■■□□□ 1.12
FDX1-201ENST00000260270 UGGT1Q9NYU2 1555 aa22.02■■□□□ 1.12
FDX1-201ENST00000260270 KANK1Q14678 1352 aa22.01■■□□□ 1.11
FDX1-201ENST00000260270 SLC24A1O60721 1099 aa22.01■■□□□ 1.11
FDX1-201ENST00000260270 NEXMIFQ5QGS0 1516 aa22■■□□□ 1.11
FDX1-201ENST00000260270 TMF1P82094 1093 aa22■■□□□ 1.11
FDX1-201ENST00000260270 VIRMAQ69YN4 1812 aaKnown RBP21.98■■□□□ 1.11
FDX1-201ENST00000260270 AMER1Q5JTC6 1135 aaPredicted RBP21.98■■□□□ 1.11
FDX1-201ENST00000260270 TMC1Q8TDI8 760 aa21.97■■□□□ 1.11
FDX1-201ENST00000260270 ZFYVE9O95405 1425 aa21.97■■□□□ 1.11
FDX1-201ENST00000260270 ZNF326Q5BKZ1 582 aaKnown RBP21.95■■□□□ 1.1
FDX1-201ENST00000260270 NPATQ14207 1427 aa21.94■■□□□ 1.1
FDX1-201ENST00000260270 KDM2AQ9Y2K7 1162 aa21.94■■□□□ 1.1
FDX1-201ENST00000260270 CCDC136Q96JN2 1154 aa21.93■■□□□ 1.1
FDX1-201ENST00000260270 RTN4Q9NQC3 1192 aaKnown RBP21.93■■□□□ 1.1
FDX1-201ENST00000260270 PREX1Q8TCU6 1659 aa21.92■■□□□ 1.1
FDX1-201ENST00000260270 IQSEC2Q5JU85 1478 aa21.92■■□□□ 1.1
FDX1-201ENST00000260270 RRP1P56182 461 aaKnown RBP21.91■■□□□ 1.1
FDX1-201ENST00000260270 CDCA8Q53HL2 280 aa21.91■■□□□ 1.1
FDX1-201ENST00000260270 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
FDX1-201ENST00000260270 ADGRB2O60241 1585 aa21.9■■□□□ 1.1
FDX1-201ENST00000260270 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
FDX1-201ENST00000260270 TRMT2AQ8IZ69 625 aaKnown RBP21.89■■□□□ 1.1
FDX1-201ENST00000260270 TMEM131LA2VDJ0 1609 aa21.89■■□□□ 1.1
FDX1-201ENST00000260270 AFAP1Q8N556 730 aa21.89■■□□□ 1.09
FDX1-201ENST00000260270 PANK3Q9H999 370 aa21.88■■□□□ 1.09
FDX1-201ENST00000260270 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
FDX1-201ENST00000260270 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
FDX1-201ENST00000260270 NGEFQ8N5V2 710 aa21.84■■□□□ 1.09
FDX1-201ENST00000260270 SALL2Q9Y467 1007 aaPredicted RBP21.84■■□□□ 1.09
FDX1-201ENST00000260270 POLR3AO14802 1390 aaPredicted RBP21.83■■□□□ 1.09
FDX1-201ENST00000260270 TULP4Q9NRJ4 1543 aa21.83■■□□□ 1.08
FDX1-201ENST00000260270 MYO5BQ9ULV0 1848 aa21.82■■□□□ 1.08
FDX1-201ENST00000260270 PPP2R1AP30153 589 aa21.81■■□□□ 1.08
FDX1-201ENST00000260270 B4GALNT3Q6L9W6 998 aa21.81■■□□□ 1.08
FDX1-201ENST00000260270 MED14O60244 1454 aa21.81■■□□□ 1.08
FDX1-201ENST00000260270 CD109Q6YHK3 1445 aa21.8■■□□□ 1.08
FDX1-201ENST00000260270 AGLP35573 1532 aa21.8■■□□□ 1.08
FDX1-201ENST00000260270 PLEKHH1Q9ULM0 1364 aa21.79■■□□□ 1.08
FDX1-201ENST00000260270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.79■■□□□ 1.08
FDX1-201ENST00000260270 RCAN3Q9UKA8 241 aa21.79■■□□□ 1.08
FDX1-201ENST00000260270 RGL3Q3MIN7 710 aa21.79■■□□□ 1.08
FDX1-201ENST00000260270 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.78■■□□□ 1.08
FDX1-201ENST00000260270 CDC42BPGQ6DT37 1551 aa21.78■■□□□ 1.08
FDX1-201ENST00000260270 MS4A1P11836 297 aa21.76■■□□□ 1.07
FDX1-201ENST00000260270 PAK3O75914 559 aaPredicted RBP21.74■■□□□ 1.07
FDX1-201ENST00000260270 KNDC1Q76NI1 1749 aa21.74■■□□□ 1.07
FDX1-201ENST00000260270 KDM2BQ8NHM5 1336 aa21.73■■□□□ 1.07
FDX1-201ENST00000260270 NSD2O96028 1365 aa21.73■■□□□ 1.07
FDX1-201ENST00000260270 DLC1Q96QB1 1528 aa21.73■■□□□ 1.07
FDX1-201ENST00000260270 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
FDX1-201ENST00000260270 ADGRF5Q8IZF2 1346 aa21.72■■□□□ 1.07
FDX1-201ENST00000260270 KIF20BQ96Q89 1820 aa21.72■■□□□ 1.07
FDX1-201ENST00000260270 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
FDX1-201ENST00000260270 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
FDX1-201ENST00000260270 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
FDX1-201ENST00000260270 NINLQ9Y2I6 1382 aa21.71■■□□□ 1.07
FDX1-201ENST00000260270 DUSP27Q5VZP5 1158 aa21.71■■□□□ 1.07
FDX1-201ENST00000260270 PHF23Q9BUL5 403 aaPredicted RBP21.71■■□□□ 1.07
FDX1-201ENST00000260270 CNGB1Q14028 1251 aaPredicted RBP21.7■■□□□ 1.06
FDX1-201ENST00000260270 NOP58Q9Y2X3 529 aaKnown RBP21.7■■□□□ 1.06
FDX1-201ENST00000260270 NKTRP30414 1462 aaKnown RBP21.7■■□□□ 1.06
FDX1-201ENST00000260270 RTL5Q5HYW3 569 aaPredicted RBP21.7■■□□□ 1.06
FDX1-201ENST00000260270 DIP2BQ9P265 1576 aa21.7■■□□□ 1.06
FDX1-201ENST00000260270 COL3A1P02461 1466 aaPredicted RBP21.69■■□□□ 1.06
FDX1-201ENST00000260270 PTPRMP28827 1452 aa21.69■■□□□ 1.06
FDX1-201ENST00000260270 SPATA31D1Q6ZQQ2 1576 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms