RNA–Protein interactions for RNA: ENST00000259803.7

GCM1-201, Transcript of glial cells missing homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCM1, Length 2,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1-201ENST00000259803 ADGRL1O94910 1474 aa14.05□□□□□ -0.16
GCM1-201ENST00000259803 SLC52A1Q9NWF4 448 aa14.05□□□□□ -0.16
GCM1-201ENST00000259803 GLI2P10070 1586 aa14.03□□□□□ -0.16
GCM1-201ENST00000259803 PSEN1P49768 467 aa14.02□□□□□ -0.17
GCM1-201ENST00000259803 SMAP1Q8IYB5 467 aaPredicted RBP14.02□□□□□ -0.17
GCM1-201ENST00000259803 MBD5Q9P267 1494 aa14.02□□□□□ -0.17
GCM1-201ENST00000259803 MIA2Q96PC5 1412 aa14.01□□□□□ -0.17
GCM1-201ENST00000259803 ABCC5O15440 1437 aa14.01□□□□□ -0.17
GCM1-201ENST00000259803 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
GCM1-201ENST00000259803 VGLL3A8MV65 326 aa14□□□□□ -0.17
GCM1-201ENST00000259803 ITSN2Q9NZM3 1697 aa14□□□□□ -0.17
GCM1-201ENST00000259803 SOX12O15370 315 aa13.98□□□□□ -0.17
GCM1-201ENST00000259803 ABCC1P33527 1531 aa13.98□□□□□ -0.17
GCM1-201ENST00000259803 DAPK1P53355 1430 aa13.98□□□□□ -0.17
GCM1-201ENST00000259803 ZBTB7CA1YPR0 619 aa13.98□□□□□ -0.17
GCM1-201ENST00000259803 TSPY4P0CV99 314 aa13.97□□□□□ -0.17
GCM1-201ENST00000259803 TSPY10P0CW01 314 aa13.97□□□□□ -0.17
GCM1-201ENST00000259803 FKBP8Q14318 412 aa13.97□□□□□ -0.17
GCM1-201ENST00000259803 UTP14CQ5TAP6 766 aaKnown RBP13.97□□□□□ -0.17
GCM1-201ENST00000259803 TCOF1Q13428 1488 aaKnown RBP13.96□□□□□ -0.17
GCM1-201ENST00000259803 SPAG9O60271 1321 aaKnown RBP13.96□□□□□ -0.18
GCM1-201ENST00000259803 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
GCM1-201ENST00000259803 NECTIN2Q92692 538 aa13.95□□□□□ -0.18
GCM1-201ENST00000259803 PAK3O75914 559 aaPredicted RBP13.94□□□□□ -0.18
GCM1-201ENST00000259803 TRIM44Q96DX7 344 aaPredicted RBP13.94□□□□□ -0.18
GCM1-201ENST00000259803 DENND4BO75064 1496 aaPredicted RBP13.94□□□□□ -0.18
GCM1-201ENST00000259803 TEX14Q8IWB6 1497 aa13.94□□□□□ -0.18
GCM1-201ENST00000259803 NEO1Q92859 1461 aa13.94□□□□□ -0.18
GCM1-201ENST00000259803 POGZQ7Z3K3 1410 aa13.94□□□□□ -0.18
GCM1-201ENST00000259803 CCDC27Q2M243 656 aa13.94□□□□□ -0.18
GCM1-201ENST00000259803 C9orf84Q5VXU9 1444 aa13.93□□□□□ -0.18
GCM1-201ENST00000259803 CEP120Q8N960 986 aa13.93□□□□□ -0.18
GCM1-201ENST00000259803 CCDC141Q6ZP82 1450 aa13.93□□□□□ -0.18
GCM1-201ENST00000259803 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
GCM1-201ENST00000259803 ARAP3Q8WWN8 1544 aa13.92□□□□□ -0.18
GCM1-201ENST00000259803 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
GCM1-201ENST00000259803 NBPF20Q3BBV1 942 aa13.91□□□□□ -0.18
GCM1-201ENST00000259803 MLECQ14165 292 aa13.91□□□□□ -0.18
GCM1-201ENST00000259803 PPP4R3BQ5MIZ7 849 aa13.91□□□□□ -0.18
GCM1-201ENST00000259803 DDRGK1Q96HY6 314 aa13.91□□□□□ -0.18
GCM1-201ENST00000259803 FRMPD1Q5SYB0 1578 aa13.91□□□□□ -0.18
GCM1-201ENST00000259803 DNMT1P26358 1616 aaKnown RBP13.9□□□□□ -0.18
GCM1-201ENST00000259803 MAPK8IP2Q13387 824 aaPredicted RBP13.9□□□□□ -0.18
GCM1-201ENST00000259803 ZNF518AQ6AHZ1 1483 aa13.9□□□□□ -0.18
GCM1-201ENST00000259803 GSE1Q14687 1217 aa13.89□□□□□ -0.19
GCM1-201ENST00000259803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.89□□□□□ -0.19
GCM1-201ENST00000259803 CARD10Q9BWT7 1032 aa13.89□□□□□ -0.19
GCM1-201ENST00000259803 NCOA1Q15788 1441 aa13.89□□□□□ -0.19
GCM1-201ENST00000259803 KIF15Q9NS87 1388 aa13.88□□□□□ -0.19
GCM1-201ENST00000259803 KDM6BO15054 1643 aa13.88□□□□□ -0.19
GCM1-201ENST00000259803 EGFL6Q8IUX8 553 aa13.88□□□□□ -0.19
GCM1-201ENST00000259803 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
GCM1-201ENST00000259803 PLEKHH2Q8IVE3 1493 aa13.87□□□□□ -0.19
GCM1-201ENST00000259803 FAM177A1Q8N128 213 aaPredicted RBP13.87□□□□□ -0.19
GCM1-201ENST00000259803 RICTORQ6R327 1708 aa13.87□□□□□ -0.19
GCM1-201ENST00000259803 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.86□□□□□ -0.19
GCM1-201ENST00000259803 TAF3Q5VWG9 929 aa13.86□□□□□ -0.19
GCM1-201ENST00000259803 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
GCM1-201ENST00000259803 SH3BP1Q9Y3L3 701 aa13.86□□□□□ -0.19
GCM1-201ENST00000259803 ZFYVE16Q7Z3T8 1539 aa13.86□□□□□ -0.19
GCM1-201ENST00000259803 NAIPQ13075 1403 aa13.85□□□□□ -0.19
GCM1-201ENST00000259803 ANP32AP39687 249 aaKnown RBP13.85□□□□□ -0.19
GCM1-201ENST00000259803 GGT6Q6P531 493 aa13.85□□□□□ -0.19
GCM1-201ENST00000259803 KIF3BO15066 747 aa13.85□□□□□ -0.19
GCM1-201ENST00000259803 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
GCM1-201ENST00000259803 ATP7AQ04656 1500 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 ARHGEF5Q12774 1597 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 ZHX1Q9UKY1 873 aaPredicted RBP13.84□□□□□ -0.19
GCM1-201ENST00000259803 RAB3GAP2Q9H2M9 1393 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 KIDINS220Q9ULH0 1771 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
GCM1-201ENST00000259803 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 ANKRD30AQ9BXX3 1397 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 CFAP74Q9C0B2 1584 aa13.84□□□□□ -0.19
GCM1-201ENST00000259803 MAP7D2Q96T17 732 aa13.83□□□□□ -0.19
GCM1-201ENST00000259803 TTC36A6NLP5 189 aa13.83□□□□□ -0.2
GCM1-201ENST00000259803 TPM2P07951 284 aa13.83□□□□□ -0.2
GCM1-201ENST00000259803 DNTTIP2Q5QJE6 756 aaKnown RBP13.83□□□□□ -0.2
GCM1-201ENST00000259803 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
GCM1-201ENST00000259803 KDM5CP41229 1560 aa13.83□□□□□ -0.2
GCM1-201ENST00000259803 ZNF428Q96B54 188 aa13.82□□□□□ -0.2
GCM1-201ENST00000259803 RALBP1Q15311 655 aa13.82□□□□□ -0.2
GCM1-201ENST00000259803 CROCC2H7BZ55 1655 aa13.81□□□□□ -0.2
GCM1-201ENST00000259803 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
GCM1-201ENST00000259803 SIGLEC1Q9BZZ2 1709 aa13.81□□□□□ -0.2
GCM1-201ENST00000259803 ANKRD50Q9ULJ7 1429 aa13.81□□□□□ -0.2
GCM1-201ENST00000259803 KIF20AO95235 890 aa13.81□□□□□ -0.2
GCM1-201ENST00000259803 HECW2Q9P2P5 1572 aa13.8□□□□□ -0.2
GCM1-201ENST00000259803 DMTNQ08495 405 aa13.8□□□□□ -0.2
GCM1-201ENST00000259803 IPO9Q96P70 1041 aaKnown RBP13.8□□□□□ -0.2
GCM1-201ENST00000259803 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
GCM1-201ENST00000259803 SLC20A2Q08357 652 aa13.8□□□□□ -0.2
GCM1-201ENST00000259803 MLH3Q9UHC1 1453 aa13.8□□□□□ -0.2
GCM1-201ENST00000259803 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
GCM1-201ENST00000259803 INO80Q9ULG1 1556 aaPredicted RBP13.8□□□□□ -0.2
GCM1-201ENST00000259803 TMTC2Q8N394 836 aa13.79□□□□□ -0.2
GCM1-201ENST00000259803 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
GCM1-201ENST00000259803 HSP90AB4PQ58FF6 505 aa13.78□□□□□ -0.2
GCM1-201ENST00000259803 FAM9BQ8IZU0 186 aa13.78□□□□□ -0.2
GCM1-201ENST00000259803 SHANK2Q9UPX8 1470 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms